CV712782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_NICTO (50S ribosomal protein L23, chloroplastic OS=Nicotiana tomentosiformis GN=rpl23-A PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.955e-46 Identity = 89/93 (95.70%), Postives = 90/93 (96.77%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP K RRMGPIM HTMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKSRRMGPIMGHTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_NICSY (50S ribosomal protein L23, chloroplastic OS=Nicotiana sylvestris GN=rpl23-A PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.955e-46 Identity = 89/93 (95.70%), Postives = 90/93 (96.77%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP K RRMGPIM HTMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKSRRMGPIMGHTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_COFAR (50S ribosomal protein L23, chloroplastic OS=Coffea arabica GN=rpl23-A PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.955e-46 Identity = 89/93 (95.70%), Postives = 90/93 (96.77%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFTDKSIRLLGKNQYT NVESGSTRTEIKHWVELFFGVKVIAMNSH+LP KGRRMGPIM HTMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_ATRBE (50S ribosomal protein L23, chloroplastic OS=Atropa belladonna GN=rpl23-A PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.955e-46 Identity = 89/93 (95.70%), Postives = 90/93 (96.77%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP K RRMGPIM HTMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKSRRMGPIMGHTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_PRUPE (50S ribosomal protein L23, chloroplastic OS=Prunus persica GN=rpl23 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.016e-45 Identity = 88/93 (94.62%), Postives = 90/93 (96.77%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHW ELFFGVKVIAMNSH+LP +GRRMGPIM HTMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWFELFFGVKVIAMNSHRLPGRGRRMGPIMGHTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_DAUCA (50S ribosomal protein L23, chloroplastic OS=Daucus carota GN=rpl23-A PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.016e-45 Identity = 89/93 (95.70%), Postives = 90/93 (96.77%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP KGRRMGPIM TMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGQTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_PLAOC (50S ribosomal protein L23, chloroplastic OS=Platanus occidentalis GN=rpl23-A PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.327e-45 Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFTDK IRLLG NQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP KGRRMGPIM HTMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIKYAVFTDKGIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_PANGI (50S ribosomal protein L23, chloroplastic OS=Panax ginseng GN=rpl23-A PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.263e-45 Identity = 88/93 (94.62%), Postives = 90/93 (96.77%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP +GRRMGPIM TMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGRGRRMGPIMGQTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_OENEH (50S ribosomal protein L23, chloroplastic OS=Oenothera elata subsp. hookeri GN=rpl23-A PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.955e-45 Identity = 87/93 (93.55%), Postives = 89/93 (95.70%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFTDK +RLLGKNQYTSNVESGSTRTEIKHWVELFFGVKV AMNSH+LP KGRRMGPIM HTMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIKYAVFTDKGVRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVQAMNSHRLPGKGRRMGPIMGHTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_EUCGG (50S ribosomal protein L23, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl23-A PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.599e-45 Identity = 87/93 (93.55%), Postives = 89/93 (95.70%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFTDKSIRLLGKNQYT NVESGSTRTEIKHWVELFFGVKV AMNSH+LP KGRRMGPI+ HTMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVKAMNSHRLPGKGRRMGPILGHTMHYRRMIITLQPGYSIPPLRKKRT 93 The following BLAST results are available for this feature:
BLAST of CV712782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712782 ID=CV712782; Name=CV712782; organism=Citrus sinensis; type=EST; length=804bpback to top |