CV712782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: YCF2_IPOPU (Protein ycf2 OS=Ipomoea purpurea GN=ycf2-A PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.424e-23 Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = -2 Query: 3 QFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 176 Q K IFELREI+REIKNSHYFLDSWTQFNSVGSFIHIFFHQERF+KL DPRI+SILL Sbjct: 12 QIKFCIFELREIMREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFLKLFDPRIFSILL 69
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: YCF2_CUCSA (Protein ycf2 OS=Cucumis sativus GN=ycf2-A PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.083e-23 Identity = 52/62 (83.87%), Postives = 53/62 (85.48%), Query Frame = -2 Query: 3 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 188 MKG QFK WI E REI KNSHYFLDSWTQFNS+GSFIHIFFHQERFIKLLD RIWSILL Sbjct: 1 MKGQQFKLWILEFREI----KNSHYFLDSWTQFNSLGSFIHIFFHQERFIKLLDSRIWSILL 58
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: YCF2_ACOCL (Protein ycf2 OS=Acorus calamus GN=ycf2-A PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.083e-23 Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = -2 Query: 3 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 188 MK HQF+ WIFELREILREIKNS +FLDSWT+F+SV S IHIFFHQER +KL DPRIWSILL Sbjct: 1 MKRHQFRFWIFELREILREIKNSPHFLDSWTKFDSVRSLIHIFFHQERLMKLFDPRIWSILL 62
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: YCF2_ACOAM (Protein ycf2 OS=Acorus americanus GN=ycf2-A PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.083e-23 Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = -2 Query: 3 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 188 MK HQF+ WIFELREILREIKNS +FLDSWT+F+SV S IHIFFHQER +KL DPRIWSILL Sbjct: 1 MKRHQFRFWIFELREILREIKNSPHFLDSWTKFDSVRSLIHIFFHQERLMKLFDPRIWSILL 62
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: YCF2_NYMAL (Protein ycf2 OS=Nymphaea alba GN=ycf2-A PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.208e-22 Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = -2 Query: 3 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 188 MK HQFKS IFELREILREIKNS YFLDSWT+F+SV SF HIFFHQERF+KLL P+ WS+LL Sbjct: 1 MKRHQFKSCIFELREILREIKNSRYFLDSWTKFDSVVSFTHIFFHQERFVKLLGPQTWSVLL 62
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: YCF2_NUPAD (Protein ycf2 OS=Nuphar advena GN=ycf2-A PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.208e-22 Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = -2 Query: 3 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 188 MK HQFKS IFELREILREIKNS YFLDSWT+F+SV SF HIFFHQERF+KLL P+ WS+LL Sbjct: 1 MKRHQFKSCIFELREILREIKNSRYFLDSWTKFDSVVSFTHIFFHQERFVKLLGPQTWSVLL 62
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_MARPO (50S ribosomal protein L23, chloroplastic OS=Marchantia polymorpha GN=rpl23 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.692e-22 Identity = 49/91 (53.85%), Postives = 68/91 (74.73%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKK 788 M+ +KY V T+K+IRLL KNQY+ +V S +T+IK W+ELFF VKVI++NSH+LP+K +++G +T+ Y+RMII LQ GYSIP K Sbjct: 1 MNQVKYPVLTEKTIRLLEKNQYSFDVNIDSNKTQIKKWIELFFNVKVISVNSHRLPKKKKKIGTTTGYTVRYKRMIIKLQSGYSIPLFSNK 91
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_ANTFO (50S ribosomal protein L23, chloroplastic OS=Anthoceros formosae GN=rpl23 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.996e-22 Identity = 46/86 (53.49%), Postives = 68/86 (79.07%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIP 773 MD +KY V T+K+IRLL +NQY +V+ +++TEIK W++ FF VKV+AMNSH+ P+K +R+GP++ + + Y+RMIITL+ YSIP Sbjct: 1 MDKVKYPVLTEKTIRLLERNQYCFDVDLKASKTEIKQWIQDFFKVKVVAMNSHRPPKKKKRIGPVLGYPVRYKRMIITLESNYSIP 86
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_PINKO (50S ribosomal protein L23, chloroplastic OS=Pinus koraiensis GN=rpl23 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.023e-21 Identity = 50/86 (58.14%), Postives = 66/86 (76.74%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIP 773 MD +KY V T+KSIRLL +NQYT NV+ S +T+IK+W+E FF VKVIAMNS++LP KG + G ++ H + +RMIITL+ G SIP Sbjct: 1 MDEVKYPVLTEKSIRLLERNQYTFNVDLQSNKTKIKNWIENFFDVKVIAMNSYRLPEKGGKRGSMIVHPIRCKRMIITLRTGDSIP 86
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_PICAB (50S ribosomal protein L23, chloroplastic OS=Picea abies GN=rpl23 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.336e-21 Identity = 50/86 (58.14%), Postives = 66/86 (76.74%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIP 773 MD +KY V T+KSIRLL +NQYT NV+S +T++K W+E FF VKVIAMNS++LP KG + G ++ H + +RMIITL+PG SIP Sbjct: 1 MDEVKYPVLTEKSIRLLERNQYTFNVDSQLNKTKMKIWIEHFFDVKVIAMNSYRLPEKGGKGGSMIGHPIRCKRMIITLKPGDSIP 86 The following BLAST results are available for this feature:
BLAST of CV712782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712782 ID=CV712782; Name=CV712782; organism=Citrus sinensis; type=EST; length=804bpback to top |