CV712782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_MESVI (50S ribosomal protein L23, chloroplastic OS=Mesostigma viride GN=rpl23 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.025e-13 Identity = 38/85 (44.71%), Postives = 59/85 (69.41%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSI 770 +D +KY V T+K+ RLL NQYT +V+ + + IK +E FF VKV+++N+H+ PRK RR+G + +Y+R+I+TL+ G SI Sbjct: 2 IDIVKYPVLTEKATRLLENNQYTFDVDPKANKITIKALIEDFFNVKVLSVNTHRPPRKKRRIGRSEGYRPNYKRVIVTLKTGDSI 86
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_NEPOL (50S ribosomal protein L23, chloroplastic OS=Nephroselmis olivacea GN=rpl23 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.749e-13 Identity = 37/86 (43.02%), Postives = 58/86 (67.44%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIP 773 +D +K V T+K+ R+L KNQYT +VE T+ +IK +E F V+V+++N+H+ PR+ RR+G + Y+R IITL+ G+ IP Sbjct: 3 IDLVKRPVITEKATRILEKNQYTFDVELSLTKPKIKALIEKAFKVEVVSVNTHRPPRRKRRLGTTQGYLPRYKRAIITLKRGFMIP 88
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_PSEAK (50S ribosomal protein L23, chloroplastic OS=Pseudendoclonium akinetum GN=rpl23 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.933e-12 Identity = 36/86 (41.86%), Postives = 56/86 (65.12%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIP 773 +D +KY V T+KS RL+ KNQYT +V+ T+ +I+ E F +KV+A+N+H LP K +R+G + Y+R IIT++ +IP Sbjct: 2 IDLVKYPVSTEKSYRLIEKNQYTFDVDVRLTKPQIRKVFENLFDIKVLAVNTHLLPTKKKRLGLNLGFKTRYKRAIITIKANQTIP 87
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_THAPS (50S ribosomal protein L23, chloroplastic OS=Thalassiosira pseudonana GN=rpl23 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.347e-12 Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSI 770 M+ IKY + TDK+ RLL NQY+ V S + IK +E F VKV+ +N+ LP+K +R+G + HY++ I+TL G +I Sbjct: 7 MNVIKYPIITDKATRLLANNQYSFIVSPKSDKPTIKAAIEYLFNVKVVKINTAHLPKKKKRIGQYLGWKAHYKKAIVTLSEGDTI 91
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RL23_TRIEI (50S ribosomal protein L23 OS=Trichodesmium erythraeum (strain IMS101) GN=rplW PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.637e-11 Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRK 785 +D IK V T+K+ RL+ NQYT +V+ +T+ IK +E F VKVI +N+ LPRK RR+G + Y+R I+TL+ G P+RK Sbjct: 9 VDIIKNPVVTEKATRLMELNQYTFDVDPRATKPMIKQVIEQIFEVKVIGINTLNLPRKKRRVGKYIGFKPRYKRAIVTLEDG---EPIRK 95
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_ADICA (50S ribosomal protein L23, chloroplastic OS=Adiantum capillus-veneris GN=rpl23 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.138e-11 Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRK-GRRMGPIMAHTMHYRRMIITLQPGYSIP 773 MD +K V T KSIRLL +NQYT V+ T+T +K W+E FF VKV +NS ++ K G++ + + Y++MI+ L+ Y IP Sbjct: 1 MDKLKNQVITGKSIRLLQQNQYTFQVDLKLTKTGMKDWIERFFDVKVEGINSSRMTSKNGKKKNKLNITYVSYKKMIVRLKKNYFIP 87
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_GUITH (50S ribosomal protein L23, chloroplastic OS=Guillardia theta GN=rpl23 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.762e-11 Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSI 770 +D +KY + TDK+ RLL NQYT +T+T+IK+ +E F VKVI++N+ LP K +R+G + Y++ ++TL+ +I Sbjct: 5 IDLVKYPLITDKATRLLELNQYTFLTSRVATKTDIKNAIEFLFNVKVISINTCLLPLKRKRLGKFVGSKPRYKKAVVTLEKNNTI 89
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_ODOSI (50S ribosomal protein L23, chloroplastic OS=Odontella sinensis GN=rpl23 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.220e-11 Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 3 Query: 525 IKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPG 761 IKY + TDK+ RLL NQY+ V S + IK +E F VKVI +N+ LP+K +R+G + HY++ I+TL G Sbjct: 15 IKYPIITDKATRLLENNQYSFIVNPYSDKITIKAAIEYLFNVKVIKVNTCHLPKKKKRVGKYLGWKSHYKKAIVTLSQG 93 The following BLAST results are available for this feature:
BLAST of CV712782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712782 ID=CV712782; Name=CV712782; organism=Citrus sinensis; type=EST; length=804bpback to top |