CV712782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_SINAL (50S ribosomal protein L23, chloroplastic OS=Sinapis alba GN=rpl23 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.268e-44 Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFTDKSIRLLGKNQYT NVESGSTRTEIKHWVELFFGVKVIAMNSH+LP K +RMGPI+ HTMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKVKRMGPILGHTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_PHAAO (50S ribosomal protein L23, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=rpl23-A PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.268e-44 Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFT+KSIRLLG NQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP KGRRMGPIM HTMHYRRMIITLQPGYSIPPL +KRT Sbjct: 1 MDGIKYAVFTEKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRRMIITLQPGYSIPPLIEKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_DRIGR (50S ribosomal protein L23, chloroplastic OS=Drimys granadensis GN=rpl23-A PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.268e-44 Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFT+KSIRLLG NQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP KGRRMGPIM HTMHYRRMIITLQPGYSIPPL +KRT Sbjct: 1 MDGIKYAVFTEKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRRMIITLQPGYSIPPLIEKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_ARATH (50S ribosomal protein L23, chloroplastic OS=Arabidopsis thaliana GN=rpl23-A PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.268e-44 Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFTDKSIRLLGKNQYT NVESGSTRTEIKHWVELFFGVKVIAMNSH+LP K +RMGPI+ HTMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKVKRMGPILGHTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_NYMAL (50S ribosomal protein L23, chloroplastic OS=Nymphaea alba GN=rpl23-A PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.279e-44 Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFT+KSIRLLG NQYTSNVESGSTRTEIKHW+ELFFGVKV+AMNSH+LP KGRRMGPIM HTMHYRRMIITLQPGYSIPPL +KRT Sbjct: 1 MDGIKYAVFTEKSIRLLGNNQYTSNVESGSTRTEIKHWIELFFGVKVVAMNSHRLPGKGRRMGPIMRHTMHYRRMIITLQPGYSIPPLIEKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_POPAL (50S ribosomal protein L23, chloroplastic OS=Populus alba GN=rpl23-A PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.507e-44 Identity = 87/93 (93.55%), Postives = 88/93 (94.62%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAV TDKSIRLL KNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP KGRRM PIM HTMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIKYAVVTDKSIRLLLKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMRPIMGHTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_HELAN (50S ribosomal protein L23, chloroplastic OS=Helianthus annuus GN=rpl23-A PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.242e-43 Identity = 86/93 (92.47%), Postives = 88/93 (94.62%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGI+YAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+L K RRMGPIM TMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIRYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLRGKARRMGPIMGQTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_GOSHI (50S ribosomal protein L23, chloroplastic OS=Gossypium hirsutum GN=rpl23-A PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.242e-43 Identity = 86/93 (92.47%), Postives = 87/93 (93.55%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKY V TDKSIRLL KNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP KGRRMGPIM HTMHYRRMIITLQPGYSIPPLR KRT Sbjct: 1 MDGIKYVVVTDKSIRLLVKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRRMIITLQPGYSIPPLRTKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_GOSBA (50S ribosomal protein L23, chloroplastic OS=Gossypium barbadense GN=rpl23-A PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.242e-43 Identity = 86/93 (92.47%), Postives = 87/93 (93.55%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKY V TDKSIRLL KNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP KGRRMGPIM HTMHYRRMIITLQPGYSIPPLR KRT Sbjct: 1 MDGIKYVVVTDKSIRLLVKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRRMIITLQPGYSIPPLRTKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_LACSA (50S ribosomal protein L23, chloroplastic OS=Lactuca sativa GN=rpl23-A PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.613e-43 Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGI+YAVFTDKSI+LLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+L K RRMGPIM TMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MDGIRYAVFTDKSIQLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLRGKARRMGPIMGQTMHYRRMIITLQPGYSIPPLRKKRT 93 The following BLAST results are available for this feature:
BLAST of CV712782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712782 ID=CV712782; Name=CV712782; organism=Citrus sinensis; type=EST; length=804bpback to top |