CV712782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_PHAAN (50S ribosomal protein L23, chloroplastic OS=Phaseolus angularis GN=rpl23-A PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.718e-43 Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 M+GIKYAVFTDKSIRLLGKNQYT NVESGSTRTEIKHWVELFF VKVIAMNSH+LP KGRR+ PIM HTMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MNGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFDVKVIAMNSHRLPVKGRRVRPIMGHTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_ACOCL (50S ribosomal protein L23, chloroplastic OS=Acorus calamus GN=rpl23-A PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.718e-43 Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFT+KSIRLLG NQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP KGRR+GPI HTMHYRRMIITLQPGYSIPPL +KRT Sbjct: 1 MDGIKYAVFTEKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRVGPIKGHTMHYRRMIITLQPGYSIPPLIEKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_SOYBN (50S ribosomal protein L23, chloroplastic OS=Glycine max GN=rpl23-A PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.051e-42 Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 M+GIKYAVFTDKSIRLLGKNQYT NVESGSTRTEIKHWVELFF VKVIAMNSH+LP KGRR+ PIM HTMHYRRMIITLQPGYSIPPLRKK+T Sbjct: 1 MNGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFDVKVIAMNSHRLPVKGRRVRPIMGHTMHYRRMIITLQPGYSIPPLRKKKT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_LOTJA (50S ribosomal protein L23, chloroplastic OS=Lotus japonicus GN=rpl23-A PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.793e-42 Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 M+GIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKV AMNSH+LP KGR++ IM HTMHYRRMIITLQPGYSIPPLRKKRT Sbjct: 1 MNGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVKAMNSHRLPAKGRKVRLIMGHTMHYRRMIITLQPGYSIPPLRKKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_PIPCE (50S ribosomal protein L23, chloroplastic OS=Piper cenocladum GN=rpl23-A PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.058e-42 Identity = 83/93 (89.25%), Postives = 87/93 (93.55%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKY VFT+KSIRLLG NQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+L KGRRMGPI+ HTMHYRRMIITLQPGYSIPPL +KRT Sbjct: 1 MDGIKYIVFTEKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLQGKGRRMGPIIGHTMHYRRMIITLQPGYSIPPLIEKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_MORIN (50S ribosomal protein L23, chloroplastic OS=Morus indica GN=rpl23-A PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.162e-41 Identity = 84/93 (90.32%), Postives = 85/93 (91.40%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKY V TDKSIRLL KNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP KGRRMGPIM HTMHYRRMIITLQPGY IPPL KK T Sbjct: 1 MDGIKYFVVTDKSIRLLLKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRRMIITLQPGYYIPPLIKKST 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_AMBTC (50S ribosomal protein L23, chloroplastic OS=Amborella trichopoda GN=rpl23-A PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.416e-41 Identity = 82/95 (86.32%), Postives = 87/95 (91.58%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQL--PRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFT+KSIRLLG NQYTSNVESGSTR EIKHW+ELFFGVKVIAMNSH+L P KGRRMGP+M H MHYRRMIITLQPGYSIPPL +KRT Sbjct: 1 MDGIKYAVFTEKSIRLLGNNQYTSNVESGSTRAEIKHWIELFFGVKVIAMNSHRLPVPGKGRRMGPLMGHRMHYRRMIITLQPGYSIPPLIEKRT 95
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_CALFG (50S ribosomal protein L23, chloroplastic OS=Calycanthus floridus var. glaucus GN=rpl23-A PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.285e-40 Identity = 83/93 (89.25%), Postives = 86/93 (92.47%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFT+KSIRLLG NQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP KGRRMG HTMHYRRMIITLQPGYSIPPL +KRT Sbjct: 1 MDGIKYAVFTEKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMG----HTMHYRRMIITLQPGYSIPPLIEKRT 89
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_LIRTU (50S ribosomal protein L23, chloroplastic OS=Liriodendron tulipifera GN=rpl23-A PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.088e-39 Identity = 81/93 (87.10%), Postives = 84/93 (90.32%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKY VFT+KSIRLL NQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSH+LP KG RMGPIM HTMHYRRMIITLQPGYSI L +KRT Sbjct: 1 MDGIKYEVFTEKSIRLLENNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGIRMGPIMGHTMHYRRMIITLQPGYSILTLIQKRT 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_WHEAT (50S ribosomal protein L23, chloroplastic OS=Triticum aestivum GN=rpl23-A PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.421e-39 Identity = 76/92 (82.61%), Postives = 86/92 (93.48%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKR 791 MDGIKYAVFT+KS+RLLGKNQYT NVESG T+TEIKHWVELFFGVKV+A+NSH+LP KGRRMGPI+ HTMHYRRMIITLQPGYSIP L +++ Sbjct: 1 MDGIKYAVFTEKSLRLLGKNQYTFNVESGFTKTEIKHWVELFFGVKVVAVNSHRLPGKGRRMGPILGHTMHYRRMIITLQPGYSIPLLDREK 92 The following BLAST results are available for this feature:
BLAST of CV712782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712782 ID=CV712782; Name=CV712782; organism=Citrus sinensis; type=EST; length=804bpback to top |