CV712782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23A_AGRST (50S ribosomal protein L23-A, chloroplastic OS=Agrostis stolonifera GN=rpl23-A PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.962e-37 Identity = 72/91 (79.12%), Postives = 84/91 (92.31%), Query Frame = 3 Query: 519 DGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKR 791 +GIKYAVFT+KS+RLLGKNQYT NVESG T+TEIKHWVELFFGVKV+A+NSH+LP KGRR+GPI+ HTMHYRRMII LQPGYSIP L +++ Sbjct: 3 NGIKYAVFTEKSLRLLGKNQYTFNVESGFTKTEIKHWVELFFGVKVVAVNSHRLPGKGRRIGPILGHTMHYRRMIIILQPGYSIPLLDREK 93
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK232_SPIOL (Putative 50S ribosomal protein L23, chloroplastic OS=Spinacia oleracea GN=rpl23 PE=5 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.470e-36 Identity = 77/93 (82.80%), Postives = 81/93 (87.10%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPLRKKRT 794 MDGIKYAVFTDKSI+LLGK QYTSNVES STRTEIKHWVEL+ + MNSH+LP KGRRMGPIM HTMHYRRMIITLQ YSIPPLRKKRT Sbjct: 1 MDGIKYAVFTDKSIQLLGKKQYTSNVESRSTRTEIKHWVELWNSYE---MNSHRLPGKGRRMGPIMGHTMHYRRMIITLQSSYSIPPLRKKRT 90
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23_PELHO (50S ribosomal protein L23, chloroplastic OS=Pelargonium hortorum GN=rpl23-A PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.797e-34 Identity = 74/88 (84.09%), Postives = 77/88 (87.50%), Query Frame = 3 Query: 516 MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPGYSIPPL 779 MDGIKYAV TDKS+RL+ KNQYT NVESGSTRTEIK WVELFFGVKVIAMNSH+LP K RRMG HTMHYRRMIITLQPGYSIP L Sbjct: 1 MDGIKYAVVTDKSLRLVSKNQYTFNVESGSTRTEIKSWVELFFGVKVIAMNSHRLPGKRRRMG----HTMHYRRMIITLQPGYSIPSL 84
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: RK23A_SORBI (50S ribosomal protein L23-A, chloroplastic OS=Sorghum bicolor GN=rpl23-A PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.065e-34 Identity = 68/81 (83.95%), Postives = 76/81 (93.83%), Query Frame = 3 Query: 519 DGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHQLPRKGRRMGPIMAHTMHYRRMIITLQPG 761 +GIKYAVFT+KS+RLLGKNQYT NVESG T+TEIKHWVELFFGVKV+A+NSH+LP KGRRMGPI+ HTMHYRRMIITLQ G Sbjct: 3 NGIKYAVFTEKSLRLLGKNQYTFNVESGFTKTEIKHWVELFFGVKVVAVNSHRLPGKGRRMGPILGHTMHYRRMIITLQLG 83
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: YCF2_GOSHI (Protein ycf2 OS=Gossypium hirsutum GN=ycf2-A PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.230e-31 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = -2 Query: 3 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 188 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL Sbjct: 1 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 62
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: YCF2_GOSBA (Protein ycf2 OS=Gossypium barbadense GN=ycf2-A PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.230e-31 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = -2 Query: 3 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 188 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL Sbjct: 1 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 62
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: YCF2_CITSI (Protein ycf2 OS=Citrus sinensis GN=ycf2-A PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.230e-31 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = -2 Query: 3 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 188 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL Sbjct: 1 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 62
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: YCF2_CARPA (Protein ycf2 OS=Carica papaya GN=ycf2-A PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.230e-31 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = -2 Query: 3 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 188 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL Sbjct: 1 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 62
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: YCF2_COFAR (Protein ycf2 OS=Coffea arabica GN=ycf2-A PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.685e-30 Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = -2 Query: 3 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 188 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKL DPRIWSILL Sbjct: 1 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLFDPRIWSILL 62
BLAST of CV712782 vs. ExPASy Swiss-Prot
Match: YCF2_EUCGG (Protein ycf2 OS=Eucalyptus globulus subsp. globulus GN=ycf2-A PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.507e-30 Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = -2 Query: 3 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 188 MKGHQFKSWIFELREILREIKNSH+FLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL Sbjct: 1 MKGHQFKSWIFELREILREIKNSHHFLDSWTQFNSVGSFIHIFFHQERFIKLLDPRIWSILL 62 The following BLAST results are available for this feature:
BLAST of CV712782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712782 ID=CV712782; Name=CV712782; organism=Citrus sinensis; type=EST; length=804bpback to top |