CV712781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_IPOPU (30S ribosomal protein S19, chloroplastic OS=Ipomoea purpurea GN=rps19 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.667e-40 Identity = 78/92 (84.78%), Postives = 84/92 (91.30%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKKNPFVANHLL+KIDKLN KAEKEII TWSR STIIPTM+GHTIAIHNG+EHLPIYITD MVGHKLGEFA T NFRGH K+DN+SRR Sbjct: 1 MARSLKKNPFVANHLLKKIDKLNRKAEKEIIRTWSRGSTIIPTMIGHTIAIHNGKEHLPIYITDHMVGHKLGEFASTFNFRGHTKSDNKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_CERDE (30S ribosomal protein S19, chloroplastic OS=Ceratophyllum demersum GN=rps19 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.177e-40 Identity = 75/92 (81.52%), Postives = 86/92 (93.48%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKKNPFVA HLL K++KLN + EKEII+TWSRASTIIPTMVGHTIA+HNG+EHLP++ITDRMVGHKLGEFAPT+ FRGHA+NDNRSRR Sbjct: 1 MARSLKKNPFVAFHLLEKVEKLNIRKEKEIIVTWSRASTIIPTMVGHTIAVHNGKEHLPVFITDRMVGHKLGEFAPTLTFRGHARNDNRSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_VITVI (30S ribosomal protein S19, chloroplastic OS=Vitis vinifera GN=rps19 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.714e-40 Identity = 76/92 (82.61%), Postives = 84/92 (91.30%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRSLKKNPF+A HLLRKI LNT EKEII+TWSR STIIPTM+GHTIA+HNG+EH PIYITDRMVGHKLGEF+ T+NFRGHAKNDNRSRR Sbjct: 1 MTRSLKKNPFIAKHLLRKIAMLNTTWEKEIIVTWSRTSTIIPTMIGHTIAVHNGKEHFPIYITDRMVGHKLGEFSSTLNFRGHAKNDNRSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_NANDO (30S ribosomal protein S19, chloroplastic OS=Nandina domestica GN=rps19 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.714e-40 Identity = 76/92 (82.61%), Postives = 86/92 (93.48%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRSLKKNPFVANHLL KI+KLN +AEKEII+TWSRASTIIP M+GHTIAIHNG+EHLPIYIT+ MVGHKLGEFAPT+ FRGHA+ND +SRR Sbjct: 1 MTRSLKKNPFVANHLLGKIEKLNMRAEKEIIVTWSRASTIIPIMIGHTIAIHNGKEHLPIYITESMVGHKLGEFAPTLTFRGHARNDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_CALFG (30S ribosomal protein S19, chloroplastic OS=Calycanthus floridus var. glaucus GN=rps19 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.714e-40 Identity = 76/92 (82.61%), Postives = 85/92 (92.39%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRSLKKNPFVANHLL KI+KLN + EKE I+TWSRASTIIPTM+GHTIAIHNG+EHLPI+ITDRMVGHKLGEFAPT+ FRGHA+ D RSRR Sbjct: 1 MTRSLKKNPFVANHLLAKIEKLNMREEKETIVTWSRASTIIPTMIGHTIAIHNGKEHLPIFITDRMVGHKLGEFAPTLTFRGHARTDTRSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_PHAAO (30S ribosomal protein S19, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=rps19 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.144e-39 Identity = 75/92 (81.52%), Postives = 85/92 (92.39%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRSLKKNPFVANHLL +I+KLN + EKEII+TWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT+ F HA+ND +SRR Sbjct: 1 MTRSLKKNPFVANHLLGRIEKLNRREEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTLTFVRHARNDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_MARPO (30S ribosomal protein S19, chloroplastic OS=Marchantia polymorpha GN=rps19 PE=3 SV=3) HSP 1 Score: 162.155 bits (409), Expect = 3.144e-39 Identity = 74/92 (80.43%), Postives = 85/92 (92.39%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRS+KK PFVA+HLL+KI+ LN K EK+IIITWSRASTI+PTM+GHTIA+HNG+EHLPIYITDRMVGHKLGEFAPT FRGHAKND +SRR Sbjct: 1 MTRSIKKGPFVADHLLKKIENLNLKKEKKIIITWSRASTIVPTMIGHTIAVHNGQEHLPIYITDRMVGHKLGEFAPTRTFRGHAKNDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_AMBTC (30S ribosomal protein S19, chloroplastic OS=Amborella trichopoda GN=rps19 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.144e-39 Identity = 73/92 (79.35%), Postives = 87/92 (94.57%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 ++RSLKKNPFVAN+LL KI KLNT+ EKEII+TWSRASTIIPTM+GHTIAIHNG+EHLP+Y+TDRMVGHKLGEFAPT+ F+GHA+ND++ RR Sbjct: 1 MSRSLKKNPFVANNLLLKIHKLNTREEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPVYVTDRMVGHKLGEFAPTLTFQGHARNDSKFRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_DRIGR (30S ribosomal protein S19, chloroplastic OS=Drimys granadensis GN=rps19 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.004e-39 Identity = 75/92 (81.52%), Postives = 84/92 (91.30%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRSLKKNPFV NHLL KI+KLN + EKEII+TWSRASTIIPTM+GHTIAIHNG+ HLPIYI DRMVGHKLGEFAPT+ FRGHA+N+N SRR Sbjct: 1 MTRSLKKNPFVDNHLLGKIEKLNMREEKEIIVTWSRASTIIPTMIGHTIAIHNGKAHLPIYIIDRMVGHKLGEFAPTLTFRGHARNNNVSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_PEA (30S ribosomal protein S19, chloroplastic OS=Pisum sativum GN=rps19 PE=3 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 9.148e-39 Identity = 75/92 (81.52%), Postives = 83/92 (90.22%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRS KKNPFVANHLL+KI KLNTK EK II TWSR STIIP M+GHTIAIHNG+EHLP+YITDRMVGHKLGEF+PT+NF G AKNDN+SRR Sbjct: 1 MTRSRKKNPFVANHLLKKIKKLNTKGEKAIIKTWSRKSTIIPIMIGHTIAIHNGKEHLPVYITDRMVGHKLGEFSPTLNFGGFAKNDNKSRR 92 The following BLAST results are available for this feature:
BLAST of CV712781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712781 ID=CV712781; Name=CV712781; organism=Citrus sinensis; type=EST; length=802bpback to top |