CV712781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_CYCTA (30S ribosomal protein S19, chloroplastic OS=Cycas taitungensis GN=rps19 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 9.148e-39 Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKKNPFVANH LRKI+ LN K EK+II+TWSRASTI+P M+GHTIA+HNG+EHLPIYITDRMVGHKLGEFAPT+ RGHAK+DNRSRR Sbjct: 1 MARSLKKNPFVANHSLRKIENLNIKKEKKIIVTWSRASTIVPAMIGHTIAVHNGKEHLPIYITDRMVGHKLGEFAPTLIPRGHAKSDNRSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_LEMMI (30S ribosomal protein S19, chloroplastic OS=Lemna minor GN=rps19 PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.560e-38 Identity = 75/92 (81.52%), Postives = 85/92 (92.39%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRS+KKNPFVANHLL KI+KLN + EKEII+TWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT +F HA+ND +SRR Sbjct: 1 MTRSIKKNPFVANHLLVKIEKLNMRQEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTRSFGKHARNDIKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_CUSEX (30S ribosomal protein S19, plastid OS=Cuscuta exaltata GN=rps19 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.662e-38 Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKKNPFVA++L +KIDKLN KAEKEIIITWSR STIIP MVGHTIAIH G+EHLPIYI D MVGHKLGEFA T NFRGHAK+DNRSRR Sbjct: 1 MARSLKKNPFVADNLFKKIDKLNIKAEKEIIITWSRGSTIIPIMVGHTIAIHTGKEHLPIYIMDHMVGHKLGEFASTFNFRGHAKSDNRSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_PHYPA (30S ribosomal protein S19, chloroplastic OS=Physcomitrella patens GN=rps19 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.476e-38 Identity = 72/92 (78.26%), Postives = 85/92 (92.39%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRSLKK PFVA+HLL+KI+ LN K EK+IIITWSRASTI+PTM+GHTIA++NG+EHLPIYITDRM+GHKLGEFAPT NFRGH K+D +SRR Sbjct: 1 MTRSLKKGPFVADHLLKKIEDLNLKKEKKIIITWSRASTIVPTMIGHTIAVYNGQEHLPIYITDRMIGHKLGEFAPTRNFRGHTKSDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_PINKO (30S ribosomal protein S19, chloroplastic OS=Pinus koraiensis GN=rps19 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.744e-38 Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKKNPFVANHLLRKI LN K EK+II+TWSRAS I+P M+GHTIA+HNGREHLPIY+TDRMV HKLGEFAPT+ F+GHA+ND +SRR Sbjct: 1 MARSLKKNPFVANHLLRKIKNLNIKKEKKIIVTWSRASVIVPAMIGHTIAVHNGREHLPIYVTDRMVDHKLGEFAPTLLFQGHARNDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_NYMAL (30S ribosomal protein S19, chloroplastic OS=Nymphaea alba GN=rps19 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.011e-37 Identity = 73/92 (79.35%), Postives = 82/92 (89.13%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RS KKNPFVANHLL KI+KLN E+ II+TWSRASTII MVGHTIA+HNG+EHLPIYIT+RMVGHKLGEFAPT+ FRGHA+NDNRSRR Sbjct: 1 MARSSKKNPFVANHLLSKIEKLNKAEERSIIVTWSRASTIIFAMVGHTIAVHNGKEHLPIYITERMVGHKLGEFAPTLTFRGHARNDNRSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_PICAB (30S ribosomal protein S19, chloroplastic OS=Picea abies GN=rps19 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.943e-37 Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKKNPFVANH LRKI LN K EK+II+TWSRAS I+P M+GHTIA+HNGREHLPIY+TDRMV HKLGEFAPT+ F+GHA+ND +SRR Sbjct: 1 MARSLKKNPFVANHSLRKIQNLNIKEEKKIIVTWSRASVIVPAMIGHTIAVHNGREHLPIYVTDRMVDHKLGEFAPTLLFQGHARNDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_PINTH (30S ribosomal protein S19, chloroplastic OS=Pinus thunbergii GN=rps19 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.843e-37 Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKKNPFVANH LRKI LN K EK+II+TWSRAS I+P M+GHTIA+HNGREHLPIY+TDRMV HKLGEFAPT+ F+GHA+ND +SRR Sbjct: 1 MARSLKKNPFVANHSLRKIKNLNIKEEKKIIVTWSRASVIVPAMIGHTIAVHNGREHLPIYVTDRMVDHKLGEFAPTLLFQGHARNDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_CUSGR (30S ribosomal protein S19, plastid OS=Cuscuta gronovii GN=rps19 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.020e-37 Identity = 73/92 (79.35%), Postives = 82/92 (89.13%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +T LKKNPFVAN+LL+KI+KLN KA+KEIIITWSR STIIP M+GHTIAIHNG+EHLPIYI D MVGHKLGEFA T+NFRGH K DN+SRR Sbjct: 1 MTYLLKKNPFVANNLLKKINKLNRKAQKEIIITWSRGSTIIPIMIGHTIAIHNGKEHLPIYIMDDMVGHKLGEFAATLNFRGHEKGDNKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_CUSRE (30S ribosomal protein S19, plastid OS=Cuscuta reflexa GN=rps19 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.556e-37 Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKKNPFVA +LL+KI KLN K EKEIIITWSR STIIP MVGHTIAIH G+EHLPIYI D MVGHKLGEFA T+NFRGHAK DNRSRR Sbjct: 1 MARSLKKNPFVAKNLLKKIYKLNIKTEKEIIITWSRGSTIIPIMVGHTIAIHTGKEHLPIYIMDHMVGHKLGEFAFTLNFRGHAKTDNRSRR 92 The following BLAST results are available for this feature:
BLAST of CV712781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712781 ID=CV712781; Name=CV712781; organism=Citrus sinensis; type=EST; length=802bpback to top |