CV712781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_CUSOB (30S ribosomal protein S19, plastid OS=Cuscuta obtusiflora GN=rps19 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.556e-37 Identity = 73/92 (79.35%), Postives = 82/92 (89.13%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +T S KKNPFVAN+LL+KI+KLN KA+KEIIITWSR STIIP M+GHTIAIHNG+EHLPIYI D MVGHKLGEFA T+NFRGH K DN+SRR Sbjct: 1 MTYSRKKNPFVANNLLKKINKLNRKAKKEIIITWSRGSTIIPIMIGHTIAIHNGKEHLPIYIMDDMVGHKLGEFAATLNFRGHEKGDNKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_EPIVI (Plastid 30S ribosomal protein S19 OS=Epifagus virginiana GN=rps19 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.118e-36 Identity = 71/89 (79.78%), Postives = 80/89 (89.89%), Query Frame = -3 Query: 333 SLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 599 +LKKN FVANHL KI+KLN K +KEII+TWSRASTIIP M+GH I+IHNG+EHLPIYITD MVGHKLGEF PT+NFRGHAK+DNRSRR Sbjct: 6 TLKKNLFVANHLRAKINKLNNKKKKEIIVTWSRASTIIPIMIGHMISIHNGKEHLPIYITDHMVGHKLGEFVPTLNFRGHAKSDNRSRR 94
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_HUPLU (30S ribosomal protein S19, chloroplastic OS=Huperzia lucidula GN=rps19 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.460e-36 Identity = 70/92 (76.09%), Postives = 82/92 (89.13%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSL+K PFVA HLL+KI+ LN + EK+II+TWSRASTI+P MVGHTIA+HNG+EHLPIY+TDRMVGHKLGEFAPT FRGHAKND +SRR Sbjct: 1 MARSLEKGPFVAYHLLKKIENLNVEEEKKIIVTWSRASTIVPIMVGHTIAVHNGQEHLPIYVTDRMVGHKLGEFAPTRIFRGHAKNDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_ANEMR (30S ribosomal protein S19, plastid OS=Aneura mirabilis GN=rps19 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.491e-36 Identity = 69/92 (75.00%), Postives = 81/92 (88.04%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRSL K PFVANHLL++I+ LN +E+++TWSRASTI+P M+GHTIAIHNGREHLPIYITDRMVGHKLGEFAPT FRGHA+ND +SRR Sbjct: 1 MTRSLGKGPFVANHLLKEIEILNFGGSEEVVVTWSRASTIVPVMIGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTRTFRGHARNDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_STAPU (30S ribosomal protein S19, chloroplastic OS=Staurastrum punctulatum GN=rps19 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.550e-36 Identity = 68/92 (73.91%), Postives = 81/92 (88.04%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKK PFVA+HLL+KI+ LN + EK++IITWSRAS I+P M+GHTIA+HNGREHLP+YITD MVGHKLGEFAPT FRGHAK+D +SRR Sbjct: 1 MARSLKKGPFVADHLLKKIESLNAQGEKKVIITWSRASIIVPGMIGHTIAVHNGREHLPVYITDLMVGHKLGEFAPTRTFRGHAKSDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_CHAVU (30S ribosomal protein S19, chloroplastic OS=Chara vulgaris GN=rps19 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.248e-36 Identity = 67/92 (72.83%), Postives = 83/92 (90.22%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRSLKK PF+ANHLL+K+ LN +A+K++I+TWSR STIIP+M+GHTIAIHNGREH+PI+ITD+MVGHKLGEF+ T FRGHAKND +SRR Sbjct: 1 MTRSLKKGPFIANHLLKKVHILNLEAQKKVILTWSRGSTIIPSMIGHTIAIHNGREHIPIFITDQMVGHKLGEFSATRTFRGHAKNDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_OENPA (30S ribosomal protein S19, chloroplastic OS=Oenothera parviflora GN=rps19 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.466e-36 Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = -3 Query: 333 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 602 RSLK NPFVAN LLRK++KLN + +K +I TWSRASTII TM+GHTIAIHNG+EHLPIYITD MVGHKLGEFAPTINF HAKNDN+SRR Sbjct: 3 RSLKNNPFVANPLLRKMEKLNRREDKILIRTWSRASTIILTMIGHTIAIHNGKEHLPIYITDYMVGHKLGEFAPTINFHEHAKNDNKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_OENGL (30S ribosomal protein S19, chloroplastic OS=Oenothera glazioviana GN=rps19 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.466e-36 Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = -3 Query: 333 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 602 RSLK NPFVAN LLRK++KLN + +K +I TWSRASTII TM+GHTIAIHNG+EHLPIYITD MVGHKLGEFAPTINF HAKNDN+SRR Sbjct: 3 RSLKNNPFVANPLLRKMEKLNRREDKILIRTWSRASTIILTMIGHTIAIHNGKEHLPIYITDYMVGHKLGEFAPTINFHEHAKNDNKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_OENEH (30S ribosomal protein S19, chloroplastic OS=Oenothera elata subsp. hookeri GN=rps19 PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 9.466e-36 Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = -3 Query: 333 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 602 RSLK NPFVAN LLRK++KLN + +K +I TWSRASTII TM+GHTIAIHNG+EHLPIYITD MVGHKLGEFAPTINF HAKNDN+SRR Sbjct: 3 RSLKNNPFVANPLLRKMEKLNRREDKILIRTWSRASTIILTMIGHTIAIHNGKEHLPIYITDYMVGHKLGEFAPTINFHEHAKNDNKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_OENBI (30S ribosomal protein S19, chloroplastic OS=Oenothera biennis GN=rps19 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.466e-36 Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = -3 Query: 333 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 602 RSLK NPFVAN LLRK++KLN + +K +I TWSRASTII TM+GHTIAIHNG+EHLPIYITD MVGHKLGEFAPTINF HAKNDN+SRR Sbjct: 3 RSLKNNPFVANPLLRKMEKLNRREDKILIRTWSRASTIILTMIGHTIAIHNGKEHLPIYITDYMVGHKLGEFAPTINFHEHAKNDNKSRR 92 The following BLAST results are available for this feature:
BLAST of CV712781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712781 ID=CV712781; Name=CV712781; organism=Citrus sinensis; type=EST; length=802bpback to top |