CV712781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_OENAR (30S ribosomal protein S19, chloroplastic OS=Oenothera argillicola GN=rps19 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.466e-36 Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = -3 Query: 333 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 602 RSLK NPFVAN LLRK++KLN + +K +I TWSRASTII TM+GHTIAIHNG+EHLPIYITD MVGHKLGEFAPTINF HAKNDN+SRR Sbjct: 3 RSLKNNPFVANPLLRKMEKLNRREDKILIRTWSRASTIILTMIGHTIAIHNGKEHLPIYITDYMVGHKLGEFAPTINFHEHAKNDNKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_DIOEL (30S ribosomal protein S19, chloroplastic OS=Dioscorea elephantipes GN=rps19 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.466e-36 Identity = 68/92 (73.91%), Postives = 80/92 (86.96%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRSLKKNPFV +HL KI+KLN + EKEII+TWSR STIIP M+GHTIAIHNG+EH PIYITD+MVGHKLGEF+PT+ F H +NDN+SRR Sbjct: 1 MTRSLKKNPFVVDHLSGKIEKLNMREEKEIIVTWSRGSTIIPAMMGHTIAIHNGKEHFPIYITDQMVGHKLGEFSPTLTFARHTRNDNKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_ANGEV (30S ribosomal protein S19, chloroplastic OS=Angiopteris evecta GN=rps19 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.466e-36 Identity = 69/92 (75.00%), Postives = 83/92 (90.22%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRSLKK PFVANHLLRKI+ LN + EK+II+T SRASTI+PTM+GHTIA++NG+EHLPIYITDRM+GHKLGEF PT FRGHA++D +SRR Sbjct: 1 MTRSLKKGPFVANHLLRKIENLNLRKEKKIIVTRSRASTIVPTMIGHTIAVYNGQEHLPIYITDRMIGHKLGEFVPTRIFRGHARSDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_CHAGL (30S ribosomal protein S19, chloroplastic OS=Chaetosphaeridium globosum GN=rps19 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.754e-35 Identity = 64/92 (69.57%), Postives = 81/92 (88.04%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RS+KK PFVA+HL++KI+ LN K EK++IITWSRASTI+P M+GHTIA+HNGREHLP+++TDRMVG KLGEF+PT FRGH K+D +SRR Sbjct: 1 MARSIKKGPFVADHLIKKIENLNAKGEKKVIITWSRASTIVPMMIGHTIAVHNGREHLPVFVTDRMVGQKLGEFSPTRTFRGHVKSDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_MESVI (30S ribosomal protein S19, chloroplastic OS=Mesostigma viride GN=rps19 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.014e-35 Identity = 66/92 (71.74%), Postives = 80/92 (86.96%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKK PFVA+HLL+KI+ LN K EK++I TWSR STI+P M+GHTIA+HNGREHLPI+ITD+MVGHKLGEF+PT FRGH K+D +SRR Sbjct: 1 MARSLKKGPFVADHLLKKIEFLNVKKEKKVITTWSRGSTILPIMIGHTIAVHNGREHLPIFITDQMVGHKLGEFSPTRTFRGHTKSDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_CHLVU (30S ribosomal protein S19, chloroplastic OS=Chlorella vulgaris GN=rps19 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.014e-35 Identity = 63/92 (68.48%), Postives = 81/92 (88.04%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKK PFVANHLL K+++LNT+ +K++I TWSR+STI+P M+GHTIA+HNGREH+P++ITD+MVGHKLGEFAPT FRGH K D +S+R Sbjct: 1 MARSLKKAPFVANHLLEKVERLNTQGDKKVIKTWSRSSTIVPLMIGHTIAVHNGREHIPVFITDQMVGHKLGEFAPTRTFRGHVKKDKKSKR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_ANTFO (30S ribosomal protein S19, chloroplastic OS=Anthoceros formosae GN=rps19 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.014e-35 Identity = 69/92 (75.00%), Postives = 81/92 (88.04%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TR LKK PFVA HLL KI+ LN K EK+II+TWSRASTI+PTM+GHTIA++NG+EHLPIYITDRMVGHKLGEFA T F+GHAK+D +SRR Sbjct: 1 MTRLLKKGPFVAYHLLEKIEDLNIKREKKIIVTWSRASTIVPTMIGHTIAVYNGQEHLPIYITDRMVGHKLGEFALTRVFKGHAKSDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RS19_CYAP7 (30S ribosomal protein S19 OS=Cyanothece sp. (strain PCC 7424) GN=rpsS PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.367e-34 Identity = 66/92 (71.74%), Postives = 82/92 (89.13%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKK PFVA+HLL KI+KLN K EK++I TWSRASTIIP MVGHTIA+HNG++H+PI+I+++MVGHKLGEFAPT FRGHAK+D ++RR Sbjct: 1 MARSLKKGPFVADHLLSKIEKLNEKGEKQVIKTWSRASTIIPDMVGHTIAVHNGKQHVPIFISEQMVGHKLGEFAPTRTFRGHAKSDKKARR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_SPIMX (30S ribosomal protein S19, chloroplastic OS=Spirogyra maxima GN=rps19 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.332e-34 Identity = 64/92 (69.57%), Postives = 81/92 (88.04%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRSLKK P VA+HLL+KI+ LN++ EK +I+TWSR STI+P M+GHTIA++NGREHLPI++TD MVGHKLGEF+PT FRGHAK+D +SRR Sbjct: 1 MTRSLKKGPNVADHLLKKIENLNSQGEKRVIVTWSRGSTIVPAMIGHTIAVYNGREHLPIFVTDLMVGHKLGEFSPTRTFRGHAKSDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_PSINU (30S ribosomal protein S19, chloroplastic OS=Psilotum nudum GN=rps19 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.332e-34 Identity = 67/92 (72.83%), Postives = 79/92 (85.87%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 +TRSLKK PFVA+HL +KI+ LN K EK +IITWSRASTI+P M+GHTIA++NGREHLPIY+TDRMVGHKLGEF T FRGHA+ D +SRR Sbjct: 1 MTRSLKKVPFVAHHLWKKIESLNIKKEKRVIITWSRASTIVPGMIGHTIAVYNGREHLPIYVTDRMVGHKLGEFVLTRTFRGHARKDKKSRR 92 The following BLAST results are available for this feature:
BLAST of CV712781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712781 ID=CV712781; Name=CV712781; organism=Citrus sinensis; type=EST; length=802bpback to top |