CV712781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_NEPOL (30S ribosomal protein S19, chloroplastic OS=Nephroselmis olivacea GN=rps19 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.332e-34 Identity = 66/90 (73.33%), Postives = 76/90 (84.44%), Query Frame = -3 Query: 333 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 602 RSLKK PFVANHLLRKI+K+N K EK +I TWSRASTIIP M+GHTIAIHNG+ HLPI+I DRM+GHKLGEF T N+RGH K D ++RR Sbjct: 3 RSLKKGPFVANHLLRKIEKMNGKGEKHVITTWSRASTIIPIMIGHTIAIHNGKSHLPIFINDRMIGHKLGEFVLTRNYRGHGKTDKKARR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_OLTVI (30S ribosomal protein S19, chloroplastic OS=Oltmannsiellopsis viridis GN=rps19 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.194e-34 Identity = 60/92 (65.22%), Postives = 82/92 (89.13%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 ++RSLKK PFVA+HLL+K++KLN + +K++I TWSRASTI+P M+GHTIA+HNGREH+P+++TD+MVGHKLGEFAPT FRGH +D +++R Sbjct: 1 MSRSLKKGPFVADHLLKKVEKLNAQNDKKVITTWSRASTIVPVMIGHTIAVHNGREHIPVFVTDQMVGHKLGEFAPTRTFRGHKNSDKKAKR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_CHLAT (30S ribosomal protein S19, chloroplastic OS=Chlorokybus atmophyticus GN=rps19 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.194e-34 Identity = 63/92 (68.48%), Postives = 80/92 (86.96%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKK PFVA+HLL+KI+ LN + EK++I TWSR STI+P M+GHTIA++NGREHLPI++TD+MVGHKLGEF+PT FRGH K+D +SRR Sbjct: 1 MARSLKKGPFVADHLLKKIEYLNARREKQVITTWSRGSTIVPIMIGHTIAVYNGREHLPIFVTDQMVGHKLGEFSPTRTFRGHVKSDKKSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_ADICA (30S ribosomal protein S19, chloroplastic OS=Adiantum capillus-veneris GN=rps19 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 8.860e-34 Identity = 64/92 (69.57%), Postives = 78/92 (84.78%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RS K+ PFVANHL+R+I LN + ++++I TWSRAS I+P M+GHTIA+HNGREHLPIY+TDRMVGHKLGEF PT NFRGHAK+D SRR Sbjct: 1 MARSSKRGPFVANHLIREIRNLNIQKKRKLITTWSRASAIVPIMIGHTIAVHNGREHLPIYVTDRMVGHKLGEFVPTRNFRGHAKSDKGSRR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_CYAPA (Cyanelle 30S ribosomal protein S19 OS=Cyanophora paradoxa GN=rps19 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.157e-33 Identity = 62/92 (67.39%), Postives = 80/92 (86.96%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKK PF+A+HLL+K++ LNT + E+I TWSRASTI+P MVGHTIA+HNGR+HLP++ITD+MVGHKLGEFAPT F+GH K+D ++RR Sbjct: 1 MARSLKKGPFIAHHLLKKVELLNTSGKTEVIKTWSRASTILPMMVGHTIAVHNGRQHLPVFITDQMVGHKLGEFAPTRTFKGHTKSDKKARR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RS19_SYNP6 (30S ribosomal protein S19 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsS PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.578e-33 Identity = 61/91 (67.03%), Postives = 78/91 (85.71%), Query Frame = -3 Query: 336 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSR 608 + RSLKK PFVA+HLLRK++KLN K +K++I TWSRASTI+P M+GHTIA+HNGR+H+P+Y+T++MVGHKLGEFAPT FRGH K+ R Sbjct: 1 MARSLKKGPFVADHLLRKVEKLNAKGDKQVIKTWSRASTILPQMIGHTIAVHNGRQHVPVYVTEQMVGHKLGEFAPTRTFRGHTKDKKAGR 91
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RS19_SYNE7 (30S ribosomal protein S19 OS=Synechococcus elongatus (strain PCC 7942) GN=rpsS PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.578e-33 Identity = 61/91 (67.03%), Postives = 78/91 (85.71%), Query Frame = -3 Query: 336 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSR 608 + RSLKK PFVA+HLLRK++KLN K +K++I TWSRASTI+P M+GHTIA+HNGR+H+P+Y+T++MVGHKLGEFAPT FRGH K+ R Sbjct: 1 MARSLKKGPFVADHLLRKVEKLNAKGDKQVIKTWSRASTILPQMIGHTIAVHNGRQHVPVYVTEQMVGHKLGEFAPTRTFRGHTKDKKAGR 91
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_OEDCA (30S ribosomal protein S19, chloroplastic OS=Oedogonium cardiacum GN=rps19 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.578e-33 Identity = 60/92 (65.22%), Postives = 80/92 (86.96%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 + RSLKK PFVAN L +KI+KLN K +K++++TWSR+STI+P M+GHTIA+HNGREH+P++ITD+MVGHKLGEF+ T +RGHAK D +S+R Sbjct: 1 MVRSLKKGPFVANDLFKKIEKLNNKGKKKVLVTWSRSSTIVPVMIGHTIAVHNGREHIPVFITDKMVGHKLGEFSLTRTYRGHAKTDKKSKR 92
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_JASNU (30S ribosomal protein S19, chloroplastic OS=Jasminum nudiflorum GN=rps19 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.578e-33 Identity = 71/98 (72.45%), Postives = 81/98 (82.65%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINF-RGH-----AKNDNRSRR 608 + RSLKKNPFV +HL+RKIDKLN K +K II TWSRASTIIPTM+GHTIA++ G+EHLPIYITD M GHKLGEFAPT+ F RGH KNDNRS+R Sbjct: 1 MARSLKKNPFVVHHLVRKIDKLNKKKKKGIIKTWSRASTIIPTMIGHTIAVYKGKEHLPIYITDYMTGHKLGEFAPTLYFLRGHPTERPTKNDNRSQR 98
BLAST of CV712781 vs. ExPASy Swiss-Prot
Match: RR19_PSEAK (30S ribosomal protein S19, chloroplastic OS=Pseudendoclonium akinetum GN=rps19 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.367e-33 Identity = 63/92 (68.48%), Postives = 78/92 (84.78%), Query Frame = -3 Query: 333 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 608 ++RSLKK PFVANHLL+K+ KLN EK++I TWSR+S IIP M+GHTI+IHNG+EH+P+YITD MVGHKLGEFAPT F+GH K D +S+R Sbjct: 1 MSRSLKKGPFVANHLLKKVQKLNDLDEKQVIKTWSRSSVIIPIMIGHTISIHNGKEHIPLYITDLMVGHKLGEFAPTRTFKGHIKKDKKSKR 92 The following BLAST results are available for this feature:
BLAST of CV712781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712781 ID=CV712781; Name=CV712781; organism=Citrus sinensis; type=EST; length=802bpback to top |