EY692109

Overview
NameEY692109
Unique NameEY692109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_BOVIN (40S ribosomal protein S3 OS=Bos taurus GN=RPS3 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.723e-52
Identity = 104/128 (81.25%), Postives = 110/128 (85.94%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 384
            KV  RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKVKIML WD  GK GP  PLPD V+I   K+E+
Sbjct:   90 KVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEI 217          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_AMBME (40S ribosomal protein S3 OS=Ambystoma mexicanum GN=RPS3 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.645e-52
Identity = 103/128 (80.47%), Postives = 110/128 (85.94%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 384
            KV  RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKVKIML WD  GK GP  PLPD V+I   K+E+
Sbjct:   90 KVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLAWDPSGKIGPKKPLPDHVSIVEPKDEI 217          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_PONAB (40S ribosomal protein S3 OS=Pongo abelii GN=RPS3 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 7.923e-52
Identity = 103/128 (80.47%), Postives = 110/128 (85.94%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 384
            +V  RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKVKIML WD  GK GP  PLPD V+I   K+E+
Sbjct:   90 EVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEI 217          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_MANSE (40S ribosomal protein S3 OS=Manduca sexta GN=RpS3 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.144e-50
Identity = 101/137 (73.72%), Postives = 112/137 (81.75%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 411
            KV  RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGIKVKIML WDQ+GK GP  P PD + +   K+E   AP   TS
Sbjct:   91 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDE--PAPLEPTS 225          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_DROME (40S ribosomal protein S3 OS=Drosophila melanogaster GN=RpS3 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.494e-50
Identity = 101/142 (71.13%), Postives = 114/142 (80.28%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELP 423
            KV  RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGIKVK+ML +D K K GP  PLPD V+ + P +E++Y  P T   I  P
Sbjct:   92 KVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPP 233          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_CAEEL (40S ribosomal protein S3 OS=Caenorhabditis elegans GN=rps-3 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.546e-47
Identity = 96/128 (75.00%), Postives = 107/128 (83.59%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 384
            KV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLRFIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI  AVRHV LRQGV+GIKVKIML +D +G+ GP   LPD V I   +EEV
Sbjct:   92 KVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEV 219          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_SCHPO (40S ribosomal protein S3 OS=Schizosaccharomyces pombe GN=rps3 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.311e-43
Identity = 96/155 (61.94%), Postives = 115/155 (74.19%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPATATS--IELPVAINPELSCVQ 456
            KV NRGLCA+AQ ESLRYKLL GLAVRRA YGVLR++ME+GAKGCEV++SGKLRA RAKSMKF DG+MI SGQP  ++IDSA RHVLLRQGVLG+KVKIML  + K +Q  +  LPD+V +  P +EE    P T  +  +E   A   E+   Q
Sbjct:   92 KVQNRGLCAVAQCESLRYKLLAGLAVRRAAYGVLRYVMEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGVLGVKVKIMLP-EPKTRQKKS--LPDIVVVLDPKEEEPITKPYTVINQPVEAAAAAGQEVVAEQ 243          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_YEAST (40S ribosomal protein S3 OS=Saccharomyces cerevisiae GN=RPS3 PE=1 SV=5)

HSP 1 Score: 171.785 bits (434), Expect = 2.555e-42
Identity = 88/134 (65.67%), Postives = 111/134 (82.84%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPA 399
            +V +RGL A+AQAES+++KLL GLA+RRA YGV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQGVLGIKVKIM +   K + GP   LPD VT I P +EE  +AP+
Sbjct:   90 RVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKVKIMRD-PAKSRTGPKA-LPDAVTIIEPKEEEPILAPS 221          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_DICDI (40S ribosomal protein S3 OS=Dictyostelium discoideum GN=rps3 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.692e-39
Identity = 82/123 (66.67%), Postives = 95/123 (77.24%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGK--QGPTTPLPDLVTI 363
            K+ NRGLCA+AQAESL+ KLL GL VR+ACY ++  IM  GAKGCEVIVSGKLRAQRAKSMKF+DGYMI SGQP  ++ID A RHVLLRQG LG+KV IML +D+  K       P PD+V I
Sbjct:   93 KILNRGLCAVAQAESLKLKLLAGLPVRKACYAIVHQIMTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFIDFACRHVLLRQGTLGVKVAIMLPYDETRKIHGACNIPQPDVVVI 215          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_ENCCU (40S ribosomal protein S3 OS=Encephalitozoon cuniculi GN=RPS3 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.581e-28
Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 363
            KV+ +GLCA+ QA  +R K+LGG+  RRA    L+    + A+GC++IVSGKL+ QRAKS+KF+DG +I SG  V +YI++    V  +QGV+GI+V+IML +D +G  GP  PLPD +TI
Sbjct:  101 KVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIMLPYDPEGVLGPNYPLPDRITI 221          
The following BLAST results are available for this feature:
BLAST of EY692109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
RS3_BOVIN2.723e-5281.2540S ribosomal protein S3 OS=Bos taurus GN=RPS3 PE=... [more]
RS3_AMBME4.645e-5280.4740S ribosomal protein S3 OS=Ambystoma mexicanum GN... [more]
RS3_PONAB7.923e-5280.4740S ribosomal protein S3 OS=Pongo abelii GN=RPS3 P... [more]
RS3_MANSE1.144e-5073.7240S ribosomal protein S3 OS=Manduca sexta GN=RpS3 ... [more]
RS3_DROME1.494e-5071.1340S ribosomal protein S3 OS=Drosophila melanogaste... [more]
RS3_CAEEL1.546e-4775.0040S ribosomal protein S3 OS=Caenorhabditis elegans... [more]
RS3_SCHPO2.311e-4361.9440S ribosomal protein S3 OS=Schizosaccharomyces po... [more]
RS3_YEAST2.555e-4265.6740S ribosomal protein S3 OS=Saccharomyces cerevisi... [more]
RS3_DICDI7.692e-3966.6740S ribosomal protein S3 OS=Dictyostelium discoide... [more]
RS3_ENCCU3.581e-2850.4140S ribosomal protein S3 OS=Encephalitozoon cunicu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-H04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692109 ID=EY692109; Name=EY692109; organism=Citrus sinensis; type=EST; length=625bp
AAAGTTAACAATAGGGGTCTCTGTGCCATTGCTCAGGCTGAGTCTCTGCG
TTACAAGCTTCTTGGAGGTCTCGCTGTTCGAAGGGCATGCTATGGTGTGC
TGAGATTTATCATGGAGAGTGGTGCCAAGGGATGTGAGGTTATTGTGAGT
GGAAAGCTCCGGGCTCAACGTGCAAAGTCCATGAAATTTAAAGATGGGTA
CATGATATCCTCAGGTCAACCTGTGAATGAATACATCGACTCAGCTGTAA
GACATGTTCTTCTTAGACAGGGTGTGCTTGGTATCAAGGTGAAGATCATG
CTTGAATGGGATCAAAAGGGCAAGCAAGGGCCAACAACACCTTTGCCTGA
TCTGGTTACCATCCACCCTCTGAAGGAAGAAGTGTATGTTGCACCAGCGA
CGGCAACCAGTATTGAGCTTCCAGTAGCTATAAACCCTGAGTTGAGTTGT
GTCCAATGTCTGATGTAATGATTTAGTAATAGCTTTTATGTTTTCTTTTA
TCCTTTTTTAATTATCTATGGAGGAGCAAGAAAATACTACTGGGTAATGG
GCATGATGTTGTCTTGTCTACAATTTTTGGGTTATTAAAAAATTTTGGGT
TCAGTTTTTAAAAAAAAAAAAAAAA
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