EY692109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METS3 (30S ribosomal protein S3P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps3p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.551e-13 Identity = 43/106 (40.57%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 67 GLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 384 G+ RR Y +R IM +GA+G EV +SGK+R R+ KF +GY+ G+P ++ V L+ GVLGI V+IM P T LPD V I P K E+ Sbjct: 105 GMHFRRVAYSTIRRIMGAGAQGVEVTISGKIRGSRSAVAKFVEGYIKKCGEPSIRLVEEGFATVQLKPGVLGIYVRIM---------PPETVLPDSVEILPPKMEI 201
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METM5 (30S ribosomal protein S3P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps3p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.551e-13 Identity = 43/121 (35.54%), Postives = 63/121 (52.07%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 363 +V N L + L G+ RR + +R +M SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ GV+G+ VKIM P LPD +TI Sbjct: 83 QVENPDLDPAIVGHKIASSLERGMHFRRTAHSAIRRVMGSGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKIM---------KPDVTLPDEITI 194
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METB6 (30S ribosomal protein S3P OS=Methanoregula boonei (strain 6A8) GN=rps3p PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.468e-13 Identity = 37/100 (37.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 300 +V N A AE L L G R+A ++R +M+SGA GCEV+++GKL RA++ KF +GY+ G+P N ++ + + GV+G++VKI+ Sbjct: 84 QVQNPSFNAQIMAERLANALERGWYFRKAGSSIMRRVMDSGALGCEVVIAGKLTGARARTQKFTEGYIKHCGEPSNTIVEKGYAIAIKKLGVIGVQVKIV 183
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METST (30S ribosomal protein S3P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps3p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12 Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 1 Query: 67 GLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 363 G+ RR Y ++R IM +GA+G EV +SGK+R R+ KF +GY+ G+P +Y+ V L+ GVLGI V+IM P LPD + I Sbjct: 105 GMQFRRVAYSIIRRIMSAGAQGVEVTISGKIRGSRSACAKFNEGYIKKCGEPSIKYVKEGFATVQLKPGVLGIYVRIM---------PPEVTLPDNIEI 194
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_META3 (30S ribosomal protein S3P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps3p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.615e-12 Identity = 43/130 (33.08%), Postives = 67/130 (51.54%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 390 ++ + L A A+ + L G+ RR + +R +M GAKG VIVSGKL +R+++ K+ +GYM G+P E +D + L+ GV+G+ VKIM P LPD + I + + V Sbjct: 83 QIESPDLDAGVVAQKIASSLERGMHFRRVAHSAIRRVMAQGAKGVVVIVSGKLTGERSRTEKYMEGYMKHCGEPSEELVDQCHKIAKLKLGVVGVTVKIM---------PPEITLPDEIVIKDVPSKTTV 203
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METM7 (30S ribosomal protein S3P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps3p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.109e-12 Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 67 GLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 363 G+ R+ + +R +M SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ GV+G+ VKIM P LPD +TI Sbjct: 105 GMHFRKTAHSAIRRVMGSGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKIM---------KPDVSLPDEITI 194
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METBF (30S ribosomal protein S3P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps3p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.109e-12 Identity = 46/128 (35.94%), Postives = 63/128 (49.22%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 384 +V L A A L + G R+A + LR +M +GA GCEV++SGKL R++ KF DGY+ SG PV+E +D + + G LG KV+I+ P LPD T E V Sbjct: 84 EVKKPELNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVDEVVDEGFAVAIKKLGTLGCKVRII---------QPGVVLPDSYTTTEPSEPV 202
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METM6 (30S ribosomal protein S3P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps3p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.755e-12 Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 67 GLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 363 G+ R+ + +R +M SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ GV+G+ VKIM P LPD +TI Sbjct: 105 GMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKIM---------KPDVSLPDEITI 194
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METKA (30S ribosomal protein S3P OS=Methanopyrus kandleri GN=rps3p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.755e-12 Identity = 43/114 (37.72%), Postives = 61/114 (53.51%), Query Frame = 1 Query: 37 AESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE 378 A L L G+ RRA YG LR IM +GAKG +I+SGKL RA++ KF +G + G+P +EY+ + + G +G+ V+IM P LPD + I P +E Sbjct: 104 ARRLASALERGIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGARARTEKFMEGAVKYCGEPGDEYMIEGYVQAVTKPGAIGVTVRIM---------PPDVELPDELEIRPPEE 208
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_HALMA (30S ribosomal protein S3P OS=Haloarcula marismortui GN=rps3p PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.755e-12 Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIELPVAINPE 441 +V+ L A A+ L L G R+A + + IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G++VKI+ P LPD I+ + E YVA S+E + PE Sbjct: 84 EVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRVKII---------PPNAELPDDFEIYEDVDVEDYVADTDGESVEELLEGEPE 222 The following BLAST results are available for this feature:
BLAST of EY692109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692109 ID=EY692109; Name=EY692109; organism=Citrus sinensis; type=EST; length=625bpback to top |