EY692109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_UNCMA (30S ribosomal protein S3P OS=Uncultured methanogenic archaeon RC-I GN=rps3p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 49/135 (36.30%), Postives = 66/135 (48.89%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATA 405 +V L A A L L G R+A L+ IM+SGA GCEVI++GKL R + KF GY+ G+PV E +D + G++G+KV+IM P LPD +TI + APA A Sbjct: 84 EVKKPELNAQMMATRLANALERGWYFRKAGQSTLQRIMDSGAMGCEVIIAGKLTGARKRREKFIAGYIKHCGKPVEELVDVGYARAKKKLGIIGVKVRIM---------PPEAVLPDQITIEAAQA---AAPAPA 206
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METMJ (30S ribosomal protein S3P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps3p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 399 +V N A AE L L G R+A +R IMESGA GCEVIV+GKL R+++ KF +GY+ G+P ++ + + G +G++VKI+ P LPD + L+ E APA Sbjct: 84 QVQNPNFNAQIMAERLANALERGWYFRKAGSSTIRRIMESGALGCEVIVAGKLTGSRSRTQKFTEGYIKHCGEPSETIVEKGYALAIKKLGTIGVQVKIV---------PPDARLPDAFDV--LEPEPKKAPA 205
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METJA (30S ribosomal protein S3P OS=Methanocaldococcus jannaschii GN=rps3p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 45/120 (37.50%), Postives = 61/120 (50.83%), Query Frame = 1 Query: 4 VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 363 V N L A A+ + L GL RR + +R +M +GAKG VI+SGKL +RA++ KF GYM G+P E +D + GV+G+ VKIM P LPD + I Sbjct: 84 VENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVMNAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGVIGVTVKIM---------RPDVLLPDEIII 194
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METAC (30S ribosomal protein S3P OS=Methanosarcina acetivorans GN=rps3p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.699e-12 Identity = 39/100 (39.00%), Postives = 55/100 (55.00%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 300 +V L A A L + G R+A + LR +M +GA GCEV++SGKL R++ KF DGY+ SG PV E +D + + G LG KV+I+ Sbjct: 84 EVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVEEVVDEGFAVAVKKLGTLGCKVRII 183
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_SULAC (30S ribosomal protein S3P OS=Sulfolobus acidocaldarius GN=rps3p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.137e-12 Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 10 NRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 297 N L A A L L G RRA + +R IM SGA G EVIVSGKL ++RAK K K+G + SGQ + + ID A+ +L+ GV G++V I Sbjct: 88 NPELNARVMAFRLAIALEKGYHFRRAAFITIRRIMSSGAVGAEVIVSGKLTSERAKYEKLKEGTVYKSGQQLEKIIDRAIGIAMLKPGVYGVEVVI 183
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METMP (30S ribosomal protein S3P OS=Methanococcus maripaludis GN=rps3p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.137e-12 Identity = 40/121 (33.06%), Postives = 62/121 (51.24%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 363 +V N L + L G+ R+ + +R +M SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ G++G+ VKIM P LPD + I Sbjct: 83 QVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIM---------RPDVSLPDEIVI 194
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METMA (30S ribosomal protein S3P OS=Methanosarcina mazei GN=rps3p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.137e-12 Identity = 38/100 (38.00%), Postives = 55/100 (55.00%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 300 +V L A A L + G R+A + +R +M +GA GCEV++SGKL R++ KF DGY+ SG PV E +D + + G LG KV+I+ Sbjct: 84 EVKKPELNAQMMASRLAASIERGWYFRKAGHNTIRAVMNAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGHPVEEVVDEGFAVAIKKLGTLGCKVRII 183
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METTH (30S ribosomal protein S3P OS=Methanobacterium thermoautotrophicum GN=rps3p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = 1 Query: 37 AESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 363 A + L G+ RR Y +R IM +GA+G EV +SGK+R R+ + KF DGY+ G+P +++ V L+ GVLG+ V+IM P LPD V I Sbjct: 95 AHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGEPSVKHVREGFATVQLKPGVLGVYVRIM---------PPDVVLPDKVEI 194
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_SULSO (30S ribosomal protein S3P OS=Sulfolobus solfataricus GN=rps3p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.367e-11 Identity = 45/123 (36.59%), Postives = 65/123 (52.85%), Query Frame = 1 Query: 4 VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI----MLEWDQKGKQGPTTPLPDLVT 360 V N L A A L L G RRA + +R IM +GA G E+I+SGKL +RA+ K K+G + SGQ + + ID A+ +L+ G+ G++V I +E K+ P+ P VT Sbjct: 86 VENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVVITKPLKIEDKINLKESPSVPQEVSVT 208
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_STAMF (30S ribosomal protein S3P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps3p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 43/121 (35.54%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 79 RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELPVAINPE 441 RR +LR +ME+GA G E+I+SGKLR++RA+ K K G + +G V+ +D AV LL++GV G++V I+ P PD V I +K E E +I+P+ Sbjct: 113 RRVAMAMLRRVMEAGAVGAEIIISGKLRSERARYEKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVIV---------RPHLKPPDYVEIKSVKPEELADLIPVEKEETNESISPQ 224 The following BLAST results are available for this feature:
BLAST of EY692109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692109 ID=EY692109; Name=EY692109; organism=Citrus sinensis; type=EST; length=625bpback to top |