CV712730

Overview
NameCV712730
Unique NameCV712730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_BORPE (Phosphoserine aminotransferase OS=Bordetella pertussis GN=serC PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.171e-49
Identity = 96/182 (52.75%), Postives = 128/182 (70.33%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+D+ R G+++AGAQKN GP+GVT+VI R+DLLG+A    P   DY     ++S YNTPP + IY+ GLVF+++   GG+  +E+ NR KAELLY  +DGS  FYR PV+ SVRS MNVPF L    L            ++QLKGH+SVGGMRASIYNAMPLAGV+ L+ ++K+F+ +H
Sbjct:  196 SRPLDIARAGLVFAGAQKNAGPAGVTVVIARRDLLGHALPICPSAFDYANVAADHSRYNTPPTFAIYVMGLVFKWIKAHGGVRGMEEANRAKAELLYGYLDGS-AFYRNPVQASVRSRMNVPFVLRDESLNDAFLQGAEAAGLMQLKGHKSVGGMRASIYNAMPLAGVQALIDYLKEFERRH 376          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_VIBPA (Phosphoserine aminotransferase OS=Vibrio parahaemolyticus GN=serC PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.067e-48
Identity = 99/183 (54.10%), Postives = 128/183 (69.95%), Query Frame = -2
Query:  169 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 717
            S+ +DV+++GVIYAGAQKN+GPSG+ I IVR DLLG A+   P +LDYK+  E  S++NTPP +  Y+ GLVF++L   GG+  +E +NR+KA+LLY+ ID S+ FYR  V  S RS MNVPF L K +L            +  LKGHR VGGMRASIYNAMPL GV+ LV FMK+F+  +A
Sbjct:  183 SREIDVSKYGVIYAGAQKNIGPSGIAIAIVRDDLLGMAKQVLPSILDYKVLAEKESMFNTPPTFAWYLSGLVFKWLKAQGGVKSIETVNREKAKLLYDYIDQSD-FYRNGVHPSNRSLMNVPFQLAKPELDATFLELADAKGLKALKGHRVVGGMRASIYNAMPLEGVQALVDFMKEFEQNYA 364          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_PSESM (Phosphoserine aminotransferase OS=Pseudomonas syringae pv. tomato GN=serC PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.067e-48
Identity = 97/182 (53.30%), Postives = 124/182 (68.13%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+PVD++RFG+IYAGAQKN+GPSGV +VI+R+DLLG A+   P MLDYK+  +N S+YNTPP    Y+ GLVFE+L E GG+  + K+N  K   LY+ ID S G Y  P+    RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ +  V  LVA+MKDF+ +H
Sbjct:  180 SRPVDISRFGMIYAGAQKNIGPSGVVVVIIREDLLGRARTLCPTMLDYKVAADNGSMYNTPPTLAWYLSGLVFEWLKEQGGVEAIGKLNDIKQRTLYDFIDAS-GLYSNPINTPDRSWMNVPFRLADDRLDKPFLAGADANGLLNLKGHRSVGGMRASIYNAVDINAVNALVAYMKDFEKEH 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_PASMU (Phosphoserine aminotransferase OS=Pasteurella multocida GN=serC PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.067e-48
Identity = 92/182 (50.55%), Postives = 134/182 (73.63%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+ +D+++FG+IYAGAQKN+GP+G+T+VIVR+DL+G+A+  TP + +Y+I  + +S+ NTPP +  Y+C LVF++LL LGG+ E+EK N+ KA+LLY+ ++ S  FYR PV K  RS MNV FT +  +L            +  LKGH+ +GGMRASIYNAMP+ GV+ L+AFMK F+A++
Sbjct:  179 SRKIDISQFGLIYAGAQKNLGPAGITLVIVREDLIGHARQTTPTIWNYEIQSKADSMINTPPTFAWYLCALVFKHLLSLGGIEEIEKRNQAKAQLLYDYLE-STPFYRNPVAKVNRSRMNVTFTTDNDELNAKFVAEATAAGLHALKGHKVLGGMRASIYNAMPMEGVQALIAFMKQFEAEN 359          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALTY (Phosphoserine aminotransferase OS=Salmonella typhimurium GN=serC PE=3 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.394e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNTLDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALPC (Phosphoserine aminotransferase OS=Salmonella paratyphi C (strain RKS4594) GN=serC PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.394e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNTLDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALNS (Phosphoserine aminotransferase OS=Salmonella newport (strain SL254) GN=serC PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.394e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNTLDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALCH (Phosphoserine aminotransferase OS=Salmonella choleraesuis GN=serC PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.394e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNTLDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALTI (Phosphoserine aminotransferase OS=Salmonella typhi GN=serC PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNALDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALSV (Phosphoserine aminotransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=serC PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNALDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361          
The following BLAST results are available for this feature:
BLAST of CV712730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_BORPE8.171e-4952.75Phosphoserine aminotransferase OS=Bordetella pertu... [more]
SERC_VIBPA1.067e-4854.10Phosphoserine aminotransferase OS=Vibrio parahaemo... [more]
SERC_PSESM1.067e-4853.30Phosphoserine aminotransferase OS=Pseudomonas syri... [more]
SERC_PASMU1.067e-4850.55Phosphoserine aminotransferase OS=Pasteurella mult... [more]
SERC_SALTY1.394e-4853.30Phosphoserine aminotransferase OS=Salmonella typhi... [more]
SERC_SALPC1.394e-4853.30Phosphoserine aminotransferase OS=Salmonella parat... [more]
SERC_SALNS1.394e-4853.30Phosphoserine aminotransferase OS=Salmonella newpo... [more]
SERC_SALCH1.394e-4853.30Phosphoserine aminotransferase OS=Salmonella chole... [more]
SERC_SALTI1.820e-4853.30Phosphoserine aminotransferase OS=Salmonella typhi... [more]
SERC_SALSV1.820e-4853.30Phosphoserine aminotransferase OS=Salmonella schwa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001N03_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001N03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712730 ID=CV712730; Name=CV712730; organism=Citrus sinensis; type=EST; length=721bp
TTTTTAGCCAGAAAAATACTCAACTACCATACCACGTTAAAAAGCAACAA
AAACATAAATAAGACAGACAAGAGAAAAACCAAAATCCTACATATTTTTC
TACTAAAAAAAAGGACTCTGGATTCAAGCCACAGCCAAAGCCAATCAACA
ACACTAAAGCAAAAATCAAGCATGCTTTGCCTGGAAATCCTTCATGAAAG
CAACCAACTTCTCAACGCCAGCCAAAGGCATAGCATTATATATTGAAGCC
CTCATTCCTCCAACTGACCTATGCCCCTTCAATTGCACCATCTTCTCCTT
AGCAGCTTCCTTCACAAACTCAGCTTCCAAATCAGACTTCTCCAGAGTAA
ACGGCACATTCATGAATGACCTCACAGATTTCTCAACTGGGCATCTATAG
AACCCGTTGCTTCCGTCAATGACGTTGTATAACAATTCAGCCTTCTTCCT
GTTCATCTTCTCAACTTCATTCAACCCACCCAATTCTAGCAAATACTCAA
AAACTAATCCACACATGTAGATACAATAACAAGGCGGTGTATTGTAAAGT
GAATTGTTTTCATCGTGAATCTTATAATCCAACATCAGAGGAGTCTTGTC
TTGAGCATTTCCAAGCAGATCCTTCCTAACAATCACGATTGTGACCCCAG
ATGGCCCCACGTTTTTCTGAGCTCCAGCATAAATTACACCAAACCTGGTA
ACATCAACAGGCTTTGAACAA
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