CV712693
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_CENSY (30S ribosomal protein S12P OS=Cenarchaeum symbiosum GN=rps12p PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.899e-36 Identity = 76/126 (60.32%), Postives = 95/126 (75.40%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFG-RKGHAVGDIPGVRFKVVKVSGVSL 459 G+ AGR LK ++ QRW+ YK+ LG + K P GS A+GIVLEK+G+EAKQPNSA+RKC RVQLIKNGK I AF+P DG +N+I+E+DEV + G G +G A+GDIPGVRFKV KV+G SL Sbjct: 7 GLFAGRVLKAKKKRQRWSISRYKRRELGLDRKANPMGGSPQARGIVLEKVGVEAKQPNSAVRKCVRVQLIKNGKSITAFLPRDGAMNFIDEHDEVHVEGMGATQGGAMGDIPGVRFKVFKVNGTSL 132
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_THEVO (30S ribosomal protein S12P OS=Thermoplasma volcanium GN=rps12p PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.591e-34 Identity = 74/129 (57.36%), Postives = 95/129 (73.64%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLAL 468 G+ AGRKL +R+ RW+D+ YK+ L + K P G+ AKGI +EK+GIEAKQPNSAIRKC +VQLIKNG++I AF DG +NYI+E+DEV + G GR G + GDIPGVR+KVV V+G+SL L Sbjct: 4 GLNAGRKLLENRKKFRWSDRDYKRRVLQLKRKSDPLEGAPQAKGIAIEKVGIEAKQPNSAIRKCVKVQLIKNGRQITAFAVGDGAINYIDEHDEVTVEGIGGRMGRSKGDIPGVRYKVVAVNGISLKEL 132
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_HALSA (30S ribosomal protein S12P OS=Halobacterium salinarium GN=rps12p PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.591e-34 Identity = 75/131 (57.25%), Postives = 94/131 (71.76%), Query Frame = 1 Query: 82 TRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLAL 468 T G A RKLK R+ +RW+D Y + G K P G+ +GIVLEK+GIEAKQPNSAIRKC RVQLIKNGK++ AF P DG +++I+E+DEV IAG G KG A+GD+ GV +KV KV+GVSL+ L Sbjct: 2 TNGKYAARKLKKDRQQRRWSDSEYARRERGLGKKSDPLEGAPQGRGIVLEKVGIEAKQPNSAIRKCVRVQLIKNGKQVTAFCPGDGAISFIDEHDEVTIAGIGGAKGRAMGDLSGVNYKVEKVNGVSLIEL 132
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_THEAC (30S ribosomal protein S12P OS=Thermoplasma acidophilum GN=rps12p PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.078e-34 Identity = 74/129 (57.36%), Postives = 95/129 (73.64%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLAL 468 G+ AGRKL +R+ RW+D+ YK+ L + K P G+ AKGI +EK+GIEAKQPNSAIRKC +VQLIKNG++I AF DG +NYI+E+DEV + G GR G + GDIPGVR+KVV V+G+SL L Sbjct: 4 GINAGRKLLENRKKFRWSDRDYKRRVLQLKRKSDPLEGAPQAKGIAIEKVGIEAKQPNSAIRKCVKVQLIKNGRQITAFAVGDGAINYIDEHDEVTVEGIGGRMGRSKGDIPGVRYKVVAVNGISLKEL 132
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_PYRCJ (30S ribosomal protein S12P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps12p PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.078e-34 Identity = 76/130 (58.46%), Postives = 98/130 (75.38%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALF 471 G+ AG KLK R+ RW D +YK+ LG K P G+ A+GIVLEK+G+EA++PN+A+RKC RVQL+KNGK + AFVP DG LNYI E+DEV+I G +G ++GDIPGVRFKVVKV+GVSL A++ Sbjct: 9 GLFAGGKLKKKRQKFRWNDVTYKRRMLGLAEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPYDGGLNYINEHDEVIIERIGGPEGKSLGDIPGVRFKVVKVNGVSLWAIW 138
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_PYRAE (30S ribosomal protein S12P OS=Pyrobaculum aerophilum GN=rps12p PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.078e-34 Identity = 75/130 (57.69%), Postives = 98/130 (75.38%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALF 471 G+ AG KLK R+ RW D +YK+ LG K P G+ A+GIVLEK+G+EA++PN+A+RKC RVQL+KNGK + AFVP DG LNYI E+DEV+I G +G ++GDIPGVRFKV+KV+GVSL A++ Sbjct: 9 GLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIW 138
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_METST (30S ribosomal protein S12P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps12p PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.078e-34 Identity = 74/126 (58.73%), Postives = 93/126 (73.81%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSL 459 G+ A +KLK +R+ RW D YK+ LG K P GS A+GIV+EK+GIEAKQPNSAIRKC RVQLIKNGK+I AF P DG + +I+E+DEV+I G G G ++GDIPGVR+KV KV+ V+L Sbjct: 3 GLFAAKKLKDNRQNFRWKDTQYKRKTLGLNIKADPLEGSPQARGIVIEKVGIEAKQPNSAIRKCVRVQLIKNGKQITAFAPGDGAIGFIDEHDEVMIEGIGGPSGRSMGDIPGVRWKVTKVNNVAL 128
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_METKA (30S ribosomal protein S12P OS=Methanopyrus kandleri GN=rps12p PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.078e-34 Identity = 76/129 (58.91%), Postives = 95/129 (73.64%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLG-NEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLAL 468 G A RKL+ R+ RW D+ YK+ L +E P G+ A+GIVLEK+G+EAKQPNSAIRKC RVQLIKNGK++ AF P DG ++YI+E+DEV+I G G KG A GDIPGVR+KVVKV+ V+L L Sbjct: 9 GEFAARKLREKRKKFRWKDERYKRRMLKLDEKADPLEGAPQARGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKQVTAFCPGDGAIDYIDEHDEVVIEGIGGPKGRAKGDIPGVRYKVVKVNDVALSEL 137
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS23_ENCCU (40S ribosomal protein S23 OS=Encephalitozoon cuniculi GN=RPS23 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.544e-34 Identity = 75/129 (58.14%), Postives = 91/129 (70.54%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKKPFAGSS-HAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 471 G+ + L R+ +R AD +Y+K LG ++K G + AK IVLEKIG+EAKQPNSAIRK R QLI GKKI AFVP DG + YIE NDEV + GFG+KG +VGDIPG+RFKV KV VSL A+F Sbjct: 3 GLFSANNLIKSRKAKRLADTAYRKRALGTKYKHSVLGRAPQAKAIVLEKIGVEAKQPNSAIRKAVRCQLIATGKKITAFVPYDGSVTYIESNDEVTVEGFGKKGRSVGDIPGIRFKVCKVQNVSLHAIF 131
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_PYRIL (30S ribosomal protein S12P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps12p PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.544e-34 Identity = 74/130 (56.92%), Postives = 98/130 (75.38%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALF 471 G+ AG KLK R+ +W D +YK+ LG K P G+ A+GIVLEK+G+EA++PN+A+RKC RVQL+KNGK + AFVP DG LNYI E+DEV+I G +G ++GDIPGVRFKV+KV+GVSL A++ Sbjct: 9 GLFAGGKLKRKRKRFKWNDITYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVIIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIW 138 The following BLAST results are available for this feature:
BLAST of CV712693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712693 ID=CV712693; Name=CV712693; organism=Citrus sinensis; type=EST; length=746bpback to top |