CV712693
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_ARCFU (30S ribosomal protein S12P OS=Archaeoglobus fulgidus GN=rps12p PE=3 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.489e-32 Identity = 73/130 (56.15%), Postives = 95/130 (73.08%), Query Frame = 1 Query: 85 RGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLAL 468 RG+ A RKL +R+ RW+D+ + + LG K P G+ A+GIVLEKIGIEA+QPNSAIRK RVQLIKNG++I AF P DG +N+I+E+DEV++ GR G ++GDIPGVR+KVVKV+ SL L Sbjct: 3 RGLFAARKLMENRKKFRWSDRRFVRRTLGLAAKADPLEGAPMARGIVLEKIGIEARQPNSAIRKAVRVQLIKNGRQITAFCPGDGAINFIDEHDEVIVEKIGGRMGRSMGDIPGVRYKVVKVNNTSLREL 132
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_PYRHO (30S ribosomal protein S12P OS=Pyrococcus horikoshii GN=rps12p PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.945e-32 Identity = 74/129 (57.36%), Postives = 92/129 (71.32%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLG-NEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLAL 468 G AGRKLK R+ RW+D YK+ L E P G+ A+GIVLEKI +EAKQPNS +RK RVQLIKNGK + AF P DG +N+I+E+DEV+I G G KG ++GDIPG+R+KVVKV+ VSL L Sbjct: 9 GEFAGRKLKLKRKKFRWSDIRYKRRVLRLKEKSDPLEGAPQARGIVLEKIAVEAKQPNSGMRKAVRVQLIKNGKVVTAFCPGDGAINFIDEHDEVIIEGIGGPKGGSMGDIPGIRYKVVKVNRVSLKEL 137
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_METS3 (30S ribosomal protein S12P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps12p PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.945e-32 Identity = 70/126 (55.56%), Postives = 93/126 (73.81%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSL 459 G+ A +KLK +R+ +W D YK+ L + K P G+ A+GIV+EK+GIEAKQPNSAIRKC RVQLIKNGK++ AF P DG + +I+E+DEV+I G G G ++GDIPGVR+KV KV+ V+L Sbjct: 3 GLFAAKKLKKNRQNFKWKDVDYKRKALRLDVKADPLEGAPQARGIVIEKVGIEAKQPNSAIRKCVRVQLIKNGKQLTAFAPGDGAIGFIDEHDEVMIEGIGGPSGRSMGDIPGVRWKVSKVNNVAL 128
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_HYPBU (30S ribosomal protein S12P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps12p PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.659e-32 Identity = 71/129 (55.04%), Postives = 96/129 (74.42%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLAL 468 G+ A RKL+ R RW+++ +K LG + K P G+ A+GIVLEK+G+EA+QPNSA+RKC RVQLIKNG+ + AFVP DG L ++E+DEVLI G G +G ++GDIPGVR++VV V+GVSL A+ Sbjct: 9 GLFAARKLRRKRLKFRWSEREFKIRMLGLKKKYDPLEGAPMARGIVLEKVGVEARQPNSAVRKCVRVQLIKNGRIVTAFVPGDGGLLVVDEHDEVLIEGIGGPRGRSMGDIPGVRYRVVTVNGVSLRAI 137
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_HALMO (30S ribosomal protein S12P OS=Halococcus morrhuae GN=rps12p PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.659e-32 Identity = 71/129 (55.04%), Postives = 90/129 (69.77%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLG-NEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLAL 468 G A RKLK R+ RW+D Y + G E G+ +GIVLEK+GIEAKQPNSAIRKC RVQLIKNG+++ AF P DG +++I+E+DEV IAG G KG A+GD+ V +KV KV+GVSL+ L Sbjct: 4 GKYAARKLKKDRQNHRWSDSKYARRARGLKEKTDALEGAPQGRGIVLEKVGIEAKQPNSAIRKCVRVQLIKNGQQVTAFCPGDGAISFIDEHDEVTIAGIGGAKGRAMGDLSAVNYKVEKVNGVSLIEL 132
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_SULAC (30S ribosomal protein S12P OS=Sulfolobus acidocaldarius GN=rps12p PE=3 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 7.390e-32 Identity = 70/131 (53.44%), Postives = 98/131 (74.81%), Query Frame = 1 Query: 85 RGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALF 471 +G+ A RKL+ R W+ +S+K+ L + K P G+ A+GIVLEK+GIE++QPNSA+RK RVQL+KNG+ + AFVP DG +N+I+E+DEV+IAG G G ++GD+PGVR+KVV V+GVSL AL+ Sbjct: 8 KGLFAARKLRLKRLKFSWSQRSFKRRMLALKEKFDPLEGAPMARGIVLEKVGIESRQPNSAVRKAVRVQLVKNGRIVTAFVPGDGGVNFIDEHDEVVIAGIGGTLGRSMGDLPGVRYKVVMVNGVSLDALY 138
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_METTP (30S ribosomal protein S12P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps12p PE=3 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 7.390e-32 Identity = 68/126 (53.97%), Postives = 92/126 (73.02%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSL 459 G+ A RK++ + RW+D Y + LG + K P G+ A+GIVLEK+G+EAKQPNSAIRKC R+QLIKNG+++ AF P DG + +I+E+DEV++ GR G ++GDIPGVRFKVV V+ VSL Sbjct: 4 GINAARKMEDDWKKLRWSDPHYCRRALGLKVKADPLGGAPRARGIVLEKVGVEAKQPNSAIRKCVRIQLIKNGRQVTAFCPGDGAIGFIDEHDEVVVERIGGRMGRSMGDIPGVRFKVVAVNNVSL 129
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_IGNH4 (30S ribosomal protein S12P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps12p PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.390e-32 Identity = 71/129 (55.04%), Postives = 95/129 (73.64%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLAL 468 G+ A RKL+ R RW+ + +K+ L + K P G+ A+GIVLEK+G+EA++PNSA+RKC RVQL+KNGK + AFVP DG LN I E+DEV+I G G +G ++GDIPGVR+KVV V+GVSL A+ Sbjct: 9 GLFAARKLERKRLKFRWSQREFKRRMLKLKEKYDPLEGAPMARGIVLEKVGVEARKPNSAVRKCVRVQLVKNGKVVTAFVPGDGGLNVISEHDEVVIVGIGGPRGRSMGDIPGVRYKVVLVNGVSLDAI 137
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_PYRFU (30S ribosomal protein S12P OS=Pyrococcus furiosus GN=rps12p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.652e-32 Identity = 73/129 (56.59%), Postives = 91/129 (70.54%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLG-NEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLAL 468 G AGRKLK R+ RW+D YK+ L E P G+ A+GIVLEKI +EAKQPNS +RK RVQLIKNGK + AF P DG + +I+E+DEV+I G G KG ++GDIPG+R+KVVKV+ VSL L Sbjct: 9 GEFAGRKLKLKRKKFRWSDIRYKRRVLRLKEKSDPLEGAPQARGIVLEKIAVEAKQPNSGMRKAVRVQLIKNGKVVTAFCPGDGAIKFIDEHDEVIIEGIGGPKGGSMGDIPGIRYKVVKVNRVSLKEL 137
BLAST of CV712693 vs. ExPASy Swiss-Prot
Match: RS12_PYRAB (30S ribosomal protein S12P OS=Pyrococcus abyssi GN=rps12p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.652e-32 Identity = 73/129 (56.59%), Postives = 91/129 (70.54%), Query Frame = 1 Query: 88 GMGAGRKLKTHRRTQRWADKSYKKSHLG-NEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLAL 468 G AGRKLK R+ RW+D YK+ L E P G+ A+GIVLEKI +EAKQPNS +RK RVQLIKNGK + AF P DG + +I+E+DEV+I G G KG ++GDIPG+R+KVVKV+ VSL L Sbjct: 9 GEFAGRKLKLKRKKFRWSDIRYKRRVLRLKEKSDPLEGAPQARGIVLEKIAVEAKQPNSGMRKAVRVQLIKNGKVVTAFCPGDGAIKFIDEHDEVIIEGIGGPKGGSMGDIPGIRYKVVKVNRVSLKEL 137 The following BLAST results are available for this feature:
BLAST of CV712693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712693 ID=CV712693; Name=CV712693; organism=Citrus sinensis; type=EST; length=746bpback to top |