CV712683
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_POPAL (Cytochrome c biogenesis protein ccsA OS=Populus alba GN=ccsA PE=3 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.061e-93 Identity = 170/252 (67.46%), Postives = 191/252 (75.79%), Query Frame = 2 Query: 5 PLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 P+SDLYE H + FK ++N+LS ITAPS FFTQGFAT G LT MHQS+ILVPALQ QWL+MHVSMMV GY VITFRKVIR+ K N + N SF EIQYM EKK++F N+ S+RNYYR+Q+IQQLD W +RI+S+GF+FLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IY HTRTN EG+NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 67 PISDLYESLIFLSWIFSIIHMVPYFKKHKNYLSTITAPSTFFTQGFATWGLLTDMHQSKILVPALQSQWLIMHVSMMVSGYAALLCGSLLSAALLVITFRKVIRIVGKNNNLL--NDSFPVDEIQYMMEKKSIFKNTFFPSSRNYYRFQLIQQLDHWGFRILSIGFLFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYFHTRTNKNLEGLNSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 316
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_CUCSA (Cytochrome c biogenesis protein ccsA OS=Cucumis sativus GN=ccsA PE=3 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 3.087e-93 Identity = 174/254 (68.50%), Postives = 189/254 (74.41%), Query Frame = 2 Query: 5 PLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLS--AITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 PLSDLYE H FK +NHLS AITAPS FTQGFATSGFLT+MHQS +LVPALQ WLMMHVSMMVLGY VITF+K IR+F K N + N F F+EIQY+NE N+ S++NYY+ Q+IQQLD WSYRIISLGFIFL+ GILSGAVWANE WGSYWNWDPKETWAFITWTIF IYLHTRTN +EGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 67 PLSDLYESLLFLSWAFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGFATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIFCKNNNLL--NALFSFNEIQYINEGNYFVRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIFLSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 318
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_POPTR (Cytochrome c biogenesis protein ccsA OS=Populus trichocarpa GN=ccsA PE=3 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 5.266e-93 Identity = 169/252 (67.06%), Postives = 190/252 (75.40%), Query Frame = 2 Query: 5 PLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 P+SDLYE H + FK ++N+LS ITAPS FFTQGFAT G LT MHQS+ILVPALQ QWL+MHVSMMV GY VITFRKVIR+ K N + N SF EIQYM EKK++ N+ S+RNYYR+Q+IQQLD W +RI+S+GF+FLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IY HTRTN EG+NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 67 PISDLYESLIFLSWIFSIIHMVPYFKKHKNYLSTITAPSTFFTQGFATWGLLTDMHQSKILVPALQSQWLIMHVSMMVSGYAALLCGSLLSAALLVITFRKVIRIVGKNNNLL--NDSFPVDEIQYMMEKKSILKNTFFPSSRNYYRFQLIQQLDHWGFRILSIGFLFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYFHTRTNKNLEGLNSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 316
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_LIRTU (Cytochrome c biogenesis protein ccsA OS=Liriodendron tulipifera GN=ccsA PE=3 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 1.173e-92 Identity = 173/253 (68.38%), Postives = 189/253 (74.70%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLSDLYE H + N++N LSAITAPSA FTQGFATSG T+MHQS ILVPALQ QWLMMHVSMM+L Y VITFRK I + K + + GSF F EI Y+NEK+NV N+ LS RNY+RYQ+ Q+LD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLHTRTN +GVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 66 FPLSDLYESLMFLSWSFSIIHMVPKIWNHKNDLSAITAPSAIFTQGFATSGLSTEMHQSAILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALLVITFRKNIGIVGKSNHLLI--GSFSFDEIHYLNEKRNVLQNTSFLSFRNYHRYQLTQRLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRTNRSLQGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 316
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_CERDE (Cytochrome c biogenesis protein ccsA OS=Ceratophyllum demersum GN=ccsA PE=3 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 2.613e-92 Identity = 169/253 (66.80%), Postives = 189/253 (74.70%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H + F N++N LS IT PSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y VITFR+ I LF KR + G F F EIQY+NEK++V N+ LS +NY+RYQ+ ++LD WSYRIISLGF FLT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IYLHTRTN ++ NSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 66 FPLSNLYESLMFLSWSFSIIHMVPYFGNHKNDLSVITNPSAIFTQGFATSGLLTEMHQSSILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALLVITFRQSIDLFFKRDQLL--TGGFSFGEIQYLNEKRSVLQNTSFLSFKNYHRYQLTRRLDHWSYRIISLGFTFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTVFAIYLHTRTNQNFQSANSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 316
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_ACOCL (Cytochrome c biogenesis protein ccsA OS=Acorus calamus GN=ccsA PE=3 SV=1) HSP 1 Score: 337.035 bits (863), Expect = 7.604e-92 Identity = 170/253 (67.19%), Postives = 190/253 (75.10%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLSDLYE H + F+N++NH SAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y VITFRK +F KR NF+ SF F EI+Y+NEK++V N+ S NY++YQ+ Q+LD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNWDPKE WAFITW IF IYLHTRTN +G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 66 FPLSDLYESLIFLSWSFSIIHMVPYFRNHRNHFSAITAPSAIFTQGFATSGLLTEMHQSIILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALLVITFRKNSDIFDKRNNFLI--RSFFFGEIEYLNEKRSVLQNTSFDSFTNYHKYQLTQRLDFWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNWDPKEIWAFITWAIFAIYLHTRTNHSLQGANSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 316
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_ACOAM (Cytochrome c biogenesis protein ccsA OS=Acorus americanus GN=ccsA PE=3 SV=1) HSP 1 Score: 337.035 bits (863), Expect = 7.604e-92 Identity = 170/253 (67.19%), Postives = 190/253 (75.10%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLSDLYE H + F+N++NH SAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y VITFRK +F KR NF+ SF F EI+Y+NEK++V N+ S NY++YQ+ Q+LD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNWDPKE WAFITW IF IYLHTRTN +G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 66 FPLSDLYESLIFLSWSFSIIHMVPYFRNHRNHFSAITAPSAIFTQGFATSGLLTEMHQSIILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALLVITFRKNSDIFDKRNNFLI--RSFFFGEIEYLNEKRSVLQNTSFDSFTNYHKYQLTQRLDFWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNWDPKEIWAFITWAIFAIYLHTRTNHSLQGANSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 316
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_NANDO (Cytochrome c biogenesis protein ccsA OS=Nandina domestica GN=ccsA PE=3 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 2.212e-91 Identity = 170/253 (67.19%), Postives = 188/253 (74.31%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLSDLYE H + F N++N LS ITAPSA FTQGFATSG LT+MH+S LVPALQ QWLMMHVSMM+L Y VITFRK + F K K+ + G F F EI+Y+NE NV N+ +S RN+ RYQVIQQLD WS R+ISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLHTRTN +G+NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 66 FPLSDLYESLMFLSWSFSIIHMVPYFTNHKNLLSTITAPSAIFTQGFATSGLLTEMHRSTKLVPALQSQWLMMHVSMMILSYAALLCGSLLSIALLVITFRKNVENFGKSKSNPFLIGPFSFGEIKYVNEINNVLRNTFLISFRNFRRYQVIQQLDCWSCRVISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNLQGINSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 318
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_SPIOL (Cytochrome c biogenesis protein ccsA OS=Spinacia oleracea GN=ccsA PE=3 SV=1) HSP 1 Score: 333.569 bits (854), Expect = 8.407e-91 Identity = 172/255 (67.45%), Postives = 190/255 (74.51%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRK-VIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSA--RNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLSDLYE H I F K +N L+ ITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVLGY +I F+K +I++F KRK+ + N SF F EIQY+NEK N+ N+ + RNYYR Q+I+QLD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLH RTN G NSAIVA +GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 66 FPLSDLYESLIFLSWSFYLIHMIPSFLKKEKNSLNVITAPSAIFTQGFATSGLLTEMHQSGILVPALQSQWLMMHVSMMVLGYAALLGGSLLSVTLLIIIFQKDLIQVFDKRKHLL--NESFFFGEIQYINEKSNIVQNASPSYVRNYYRSQLIEQLDHWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHIRTNKNLRGANSAIVAFIGFLIIWICYFGVNLLGIGLHSYGSF 318
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_OENEH (Cytochrome c biogenesis protein ccsA OS=Oenothera elata subsp. hookeri GN=ccsA PE=3 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 3.195e-90 Identity = 166/256 (64.84%), Postives = 189/256 (73.83%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN*H 763 FPLS+LYE H FK ++++ IT+ S FTQG TSG L++M QS ILVPALQ QWLMMHVSMMVLGY VITFRK +R+F K+K F+ SF F EIQY NE NV L++ +S++NYYR Q+IQQLDRWS RIISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IYLHTRTN ++ VNSAIVA +GF+IIWICYFGVNLLGIGLHSYGSFN H Sbjct: 66 FPLSNLYESLLFLSWSFAIIHMFPYFKKQKSYVRTITSSSTIFTQGLVTSGLLSEMQQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKALRIFSKKKAFL--KDSFSFVEIQYRNEPSNVLLSTSFISSKNYYRAQLIQQLDRWSSRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTMFAIYLHTRTNPNFQSVNSAIVAFLGFIIIWICYFGVNLLGIGLHSYGSFNLH 319 The following BLAST results are available for this feature:
BLAST of CV712683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712683 ID=CV712683; Name=CV712683; organism=Citrus sinensis; type=EST; length=831bpback to top |