CV712683
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_NASOF (Cytochrome c biogenesis protein ccsA OS=Nasturtium officinale GN=ccsA PE=3 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 9.003e-85 Identity = 163/259 (62.93%), Postives = 183/259 (70.66%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKR---KNFVHVNGSFCFSEIQYMNEKKNVFL----NSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H + F K +NHL+AITAPSA F QGFATSG L KM QS ILVPALQ QWLMMHVSMM+LGY VITFRKV FL++ K F+ + F F +NEK + L N +RNYYRYQ+I+QLD WS+RIISLGFIFLT GILSGAVWANE WGSYWNWDPKETWAFITWTIF IYLH +TN +NSAIVAS+GF++IWICYFGVNLLGIGLHSYGSF Sbjct: 68 FPLSNLYESLIFLSWAFSIIHMVSYFNKKKKNHLNAITAPSAIFIQGFATSGLLNKMPQSAILVPALQSQWLMMHVSMMILGYGALLCGSLLSMALLVITFRKVGPTFLQKNIKKKFL-LTELFSFDVFYSINEKNAILLQQNINFSFSRNYYRYQLIEQLDYWSFRIISLGFIFLTVGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHIKTNRNVRSINSAIVASIGFILIWICYFGVNLLGIGLHSYGSF 325
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_ARAHI (Cytochrome c biogenesis protein ccsA OS=Arabis hirsuta GN=ccsA PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 2.006e-84 Identity = 161/260 (61.92%), Postives = 183/260 (70.38%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLF----LKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLS----ARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H I F K +NHL+AITAPSA F QGFATSG L K+ +S ILVPALQ QWLMMHVSMM+LGY VITFRK F +K+ N + F F + Y+NE+ ++ L S +RNYYRYQ+I+QLD WS+RIISLGFIFLT GILSGAVWANE WGSYWNWDPKETWAFITWTIF I+LH +TN G+NSAIVAS GFL+IWICYFGVNLLGIGLHSYGSF Sbjct: 68 FPLSNLYESLIFLSWAFSIIHMISYFNKKQKNHLNAITAPSAIFIQGFATSGLLNKIPESAILVPALQSQWLMMHVSMMILGYGALLCGSLLSIALLVITFRKTGPTFWNKNIKKNNLL--TEFFYFDVLYYINERNSILLQQNSNFSFSRNYYRYQLIEQLDYWSFRIISLGFIFLTVGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIFLHIKTNRNVRGINSAIVASTGFLLIWICYFGVNLLGIGLHSYGSF 325
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_AMBTC (Cytochrome c biogenesis protein ccsA OS=Amborella trichopoda GN=ccsA PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 2.006e-84 Identity = 157/251 (62.55%), Postives = 180/251 (71.71%), Query Frame = 2 Query: 5 PLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLN-SLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 PLS+LYE H I +N++N LS+ITAPSA TQGF TSG LT+MHQS ILVPALQ WL+MHVSMM+L Y VITFRK + + F+ + F F EIQY+NEK+++ N S S RNY++YQ+ QQLD WSYR+I +GF LT GILSGAVWANEAWGSYWNWDPKETWAFITWTI IYLHTRTN + NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 66 PLSNLYESLIFLSWGFSLIHMISKIQNHKNFLSSITAPSAILTQGFVTSGLLTEMHQSAILVPALQSHWLIMHVSMMLLSYAALLCGSLLSIALLVITFRKKLDII-----FLLIR-LFSFGEIQYLNEKRSILQNTSFSFRNYHKYQLTQQLDHWSYRVIGIGFTLLTLGILSGAVWANEAWGSYWNWDPKETWAFITWTISAIYLHTRTNKNLQSANSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 310
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_SACOF (Cytochrome c biogenesis protein ccsA OS=Saccharum officinarum GN=ccsA PE=3 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 2.619e-84 Identity = 153/253 (60.47%), Postives = 178/253 (70.36%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSA--RNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y +I FR F +KN + +F FSEI+Y+ K++ N+ NYY+YQ+ ++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G NSA+VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 66 FPLSNLYESLIFLSWTLYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLIIRFRNSFDFFSLKKNVLRK--TFFFSEIEYLYAKRSALKNTSFPVFPNYYKYQLTERLDSWSYRVISLGFTLLTVGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTNSALVASIGFLIIWICYFGINLLGIGLHSYGSF 316
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_SACHY (Cytochrome c biogenesis protein ccsA OS=Saccharum hybrid GN=ccsA PE=3 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 2.619e-84 Identity = 153/253 (60.47%), Postives = 178/253 (70.36%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSA--RNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y +I FR F +KN + +F FSEI+Y+ K++ N+ NYY+YQ+ ++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G NSA+VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 66 FPLSNLYESLIFLSWTLYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLIIRFRNSFDFFSLKKNVLRK--TFFFSEIEYLYAKRSALKNTSFPVFPNYYKYQLTERLDSWSYRVISLGFTLLTVGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTNSALVASIGFLIIWICYFGINLLGIGLHSYGSF 316
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_HORVU (Cytochrome c biogenesis protein ccsA OS=Hordeum vulgare GN=ccsA PE=3 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 2.619e-84 Identity = 154/253 (60.87%), Postives = 179/253 (70.75%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y +I FR F K+K V +N +F FSEI + K++ ++ S NYY+YQ+ ++LD WSYRIISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G NSA++AS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 66 FPLSNLYESLIFLSWALYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAAILIIRFRNNFHFFSKKKKNV-LNKTFFFSEIAFFYAKRSALKSAPVPSFPNYYKYQLTERLDSWSYRIISLGFTLLTIGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTNSALIASIGFLIIWICYFGINLLGIGLHSYGSF 317
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_NYMAL (Cytochrome c biogenesis protein ccsA OS=Nymphaea alba GN=ccsA PE=3 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 3.421e-84 Identity = 159/250 (63.60%), Postives = 175/250 (70.00%), Query Frame = 2 Query: 5 PLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 PLSDLYE H + F+N +N S ITAPSA TQGFATSG LTKMHQS ILVPALQ +WLMMHVSMM+L Y VITFR+ I +F K + + SF F E QY+N S RNY+RYQ+ Q+LD WSYR+I LGF LT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IYLHTRTN +G NSAIVASMGFLIIWICYFGVNLLG GLHSYGSF Sbjct: 66 PLSDLYESLMFLSWSFSLIHIVPYFRNYKNFFSKITAPSAILTQGFATSGLLTKMHQSAILVPALQSRWLMMHVSMMLLSYAALLCGSLLSITLLVITFRRKIDIFGKTNHLLI--SSFSFDETQYVN---------FSFRNYHRYQLTQRLDYWSYRVIGLGFTLLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTVFAIYLHTRTNKSLQGANSAIVASMGFLIIWICYFGVNLLGRGLHSYGSF 304
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_NICTO (Cytochrome c biogenesis protein ccsA OS=Nicotiana tomentosiformis GN=ccsA PE=3 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 3.421e-84 Identity = 163/251 (64.94%), Postives = 177/251 (70.52%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLSDLYE H I FK N LS I PSA FTQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY VITFRK +LF K F+ N SF E N +N + SA+NYYR Q+IQQLD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNWDPKETWAFITW +F IYLHTRTN G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 66 FPLSDLYESLIFLSWSFSLIHIIPYFKKNVLILSKIIGPSAIFTQGFATSGILTEIHQSVILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRQLFYKSNGFL--NESFFLGE----NVLQNTYF--FSAKNYYRSQLIQQLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWIVFAIYLHTRTNRNLRGANSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 308
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_ORYSJ (Cytochrome c biogenesis protein ccsA OS=Oryza sativa subsp. japonica GN=ccsA PE=3 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 5.835e-84 Identity = 153/253 (60.47%), Postives = 180/253 (71.15%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSAR--NYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y +I FRK + F K+K V ++ +F F+EI+Y K++ ++ NYY+YQ+I++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G SA VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 66 FPLSNLYESLIFLSWALYILHMIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLMIRFRKNLDFFSKKKKNV-LSKTFFFNEIEYFYAKRSALKSTFFPLFPNYYKYQLIERLDSWSYRVISLGFTLLTIGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTKSAFVASIGFLIIWICYFGINLLGIGLHSYGSF 317
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_ORYSA (Cytochrome c biogenesis protein ccsA OS=Oryza sativa GN=ccsA PE=3 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 5.835e-84 Identity = 153/253 (60.47%), Postives = 180/253 (71.15%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSAR--NYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y +I FRK + F K+K V ++ +F F+EI+Y K++ ++ NYY+YQ+I++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G SA VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 66 FPLSNLYESLIFLSWALYILHMIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLMIRFRKNLDFFSKKKKNV-LSKTFFFNEIEYFYAKRSALKSTFFPLFPNYYKYQLIERLDSWSYRVISLGFTLLTIGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTKSAFVASIGFLIIWICYFGINLLGIGLHSYGSF 317 The following BLAST results are available for this feature:
BLAST of CV712683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712683 ID=CV712683; Name=CV712683; organism=Citrus sinensis; type=EST; length=831bpback to top |