CV712683
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_WHEAT (Cytochrome c biogenesis protein ccsA OS=Triticum aestivum GN=ccsA PE=3 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 9.954e-84 Identity = 151/253 (59.68%), Postives = 179/253 (70.75%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y +I FR F K+K V +N +F FS+I+Y K++ + S NYY+YQ+ ++LD WSYR+ISLGF LT GIL GAVWANEAWG+YWNWDPKETWAFITWTIF IYLH+RT+ W+G NSA++AS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 66 FPLSNLYESLISLSWALYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLGGPPLSAAILIIRFRNNFHFFSKKKKNV-LNKTFLFSDIKYFYAKRSALKRTSVPSFPNYYKYQLTERLDSWSYRVISLGFTLLTGGILGGAVWANEAWGAYWNWDPKETWAFITWTIFAIYLHSRTHPNWKGTNSALIASIGFLIIWICYFGINLLGIGLHSYGSF 317
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_SORBI (Cytochrome c biogenesis protein ccsA OS=Sorghum bicolor GN=ccsA PE=3 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 9.954e-84 Identity = 153/253 (60.47%), Postives = 177/253 (69.96%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSA--RNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y +I FR F +KN +F FSEI+Y+ K++ N+ NYY+YQ+ ++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G NSA+VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 66 FPLSNLYESLIFLSWTLYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLIIRFRNSFDFFSLKKNVFLK--TFFFSEIEYLYAKRSALKNTSFPVFPNYYKYQLTERLDSWSYRVISLGFTLLTVGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTNSALVASIGFLIIWICYFGINLLGIGLHSYGSF 316
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_ORYSI (Cytochrome c biogenesis protein ccsA OS=Oryza sativa subsp. indica GN=ccsA PE=3 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 9.954e-84 Identity = 153/253 (60.47%), Postives = 179/253 (70.75%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSAR--NYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y +I FRK + F K+K V + +F F+EI+Y K++ ++ NYY+YQ+I++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G SA VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 66 FPLSNLYESLIFLSWALYILHMIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLMIRFRKNLDFFSKKKKNVLLK-TFFFNEIEYFYAKRSALKSTFFPLFPNYYKYQLIERLDSWSYRVISLGFTLLTIGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTKSAFVASIGFLIIWICYFGINLLGIGLHSYGSF 317
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_ORYNI (Cytochrome c biogenesis protein ccsA OS=Oryza nivara GN=ccsA PE=3 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 9.954e-84 Identity = 153/253 (60.47%), Postives = 179/253 (70.75%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSAR--NYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y +I FRK + F K+K V + +F F+EI+Y K++ ++ NYY+YQ+I++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G SA VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 66 FPLSNLYESLIFLSWALYILHMIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLMIRFRKNLDFFSKKKKNVLLK-TFFFNEIEYFYAKRSALKSTFFPLFPNYYKYQLIERLDSWSYRVISLGFTLLTIGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTKSAFVASIGFLIIWICYFGINLLGIGLHSYGSF 317
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_NUPAD (Cytochrome c biogenesis protein ccsA OS=Nuphar advena GN=ccsA PE=3 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 9.954e-84 Identity = 157/250 (62.80%), Postives = 176/250 (70.40%), Query Frame = 2 Query: 5 PLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 PLSDLYE H + F+N +N+ S ITAPSA TQGFATSG LTKMHQS ILVPALQ +WLMMHVSMM+L Y VITFR+ I + K + + SF F EIQY+N +S RNY+RYQ+ Q+LD WSYR+I LGF LT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IY HTRTN +G NSAIVAS+GFLIIWICYFGVNLLG GLHSYGSF Sbjct: 66 PLSDLYESLMFLSWSFSFIHIVPYFRNYKNYFSTITAPSAILTQGFATSGLLTKMHQSAILVPALQSRWLMMHVSMMLLSYAALLCGSLLSITLLVITFRRNIDIIGKTNHLLI--SSFSFDEIQYLN---------VSFRNYHRYQLTQRLDHWSYRVIGLGFTLLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTVFAIYSHTRTNKSLQGANSAIVASIGFLIIWICYFGVNLLGRGLHSYGSF 304
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_COFAR (Cytochrome c biogenesis protein ccsA OS=Coffea arabica GN=ccsA PE=3 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 9.954e-84 Identity = 161/253 (63.64%), Postives = 183/253 (72.33%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H + FK N+ +LS IT S FTQGF TSG LT++ QS ILVPALQ +WL+MHV+MM+LGY VITFRK ++ L R N + +N SF F EI+YMNE+ N+ N+ SA+NYYR Q+IQQLD WS R ISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITW IF IYLHTRT + NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 67 FPLSNLYESLIFLSWSFSLIHIVPYFKKNKKYLSTITGSSVVFTQGFTTSGLLTEIDQSSILVPALQSEWLIMHVTMMILGYASLLCGSLLSIALLVITFRKNKKI-LYRNNLL-LNESFFFVEIEYMNERSNLLQNTSFFSAKNYYRSQLIQQLDYWSSRGISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWIIFAIYLHTRTTRNPKCANSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 317
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_BRADI (Cytochrome c biogenesis protein ccsA OS=Brachypodium distachyon GN=ccsA PE=3 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 9.954e-84 Identity = 152/253 (60.08%), Postives = 179/253 (70.75%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y +I FR F K+ V + +F FS+++Y K++ F ++ S NYY+YQ+ ++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G NSA+VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 66 FPLSNLYESLIFLSWALYILHTIPKVQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAAILIIRFRNNFNFFSKKNKNV-LKKTFLFSKMEYFYAKRSYFKSASVPSFPNYYKYQLTERLDSWSYRVISLGFTLLTIGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNQNWKGTNSALVASIGFLIIWICYFGINLLGIGLHSYGSF 317
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_MAIZE (Cytochrome c biogenesis protein ccsA OS=Zea mays GN=ccsA PE=3 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.698e-83 Identity = 153/253 (60.47%), Postives = 177/253 (69.96%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSA--RNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y +I FRK F +KN +F FSEI+Y+ K++ N+ NYY+YQ+ ++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+R N W+G NSA+VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 66 FPLSNLYESLIFLSWTLYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLIIRFRKNFDFFSLKKNVFLK--TFFFSEIEYLYAKRSALKNTSFPVFPNYYKYQLTERLDSWSYRVISLGFTLLTVGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNPNWKGTNSALVASIGFLIIWICYFGINLLGIGLHSYGSF 316
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_SOLTU (Cytochrome c biogenesis protein ccsA OS=Solanum tuberosum GN=ccsA PE=3 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.896e-83 Identity = 163/253 (64.43%), Postives = 176/253 (69.57%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLSDLYE H I FK N LS IT PSA TQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY VITFRK +LF K F+ N SF E NV N+ A+NYYR Q+IQQLD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNWDPKETWAFITW +F IYLHTRTN G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 66 FPLSDLYESLIFLSWSFSLIHIIPYFKKNVLILSKITGPSAILTQGFATSGILTEIHQSGILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRKLFYKSNGFL--NESFFLGE--------NVVENTSFFCAKNYYRSQLIQQLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWIVFAIYLHTRTNRNLRGPNSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 308
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_SOLBU (Cytochrome c biogenesis protein ccsA OS=Solanum bulbocastanum GN=ccsA PE=3 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.896e-83 Identity = 163/253 (64.43%), Postives = 176/253 (69.57%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLSDLYE H I FK N LS IT PSA TQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY VITFRK +LF K F+ N SF E NV N+ A+NYYR Q+IQQLD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNWDPKETWAFITW +F IYLHTRTN G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 66 FPLSDLYESLIFLSWSFSLIHIIPYFKKNVLILSKITGPSAILTQGFATSGILTEIHQSGILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRKLFYKSNGFL--NESFFLGE--------NVVENTSFFCAKNYYRSQLIQQLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWIVFAIYLHTRTNRNLRGPNSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 308 The following BLAST results are available for this feature:
BLAST of CV712683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712683 ID=CV712683; Name=CV712683; organism=Citrus sinensis; type=EST; length=831bpback to top |