CV712683
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_IPOPU (Cytochrome c biogenesis protein ccsA OS=Ipomoea purpurea GN=ccsA PE=3 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 6.677e-80 Identity = 157/255 (61.57%), Postives = 179/255 (70.20%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSA----IVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLSDLYE H I F N LS I +PSA FTQGFATSG LT++HQS ILVPAL+ +WL+MHVSMM+LGY VITFRK +LF +F+ SF F E + +K + F SA+NYYR Q IQQLD WSYR+ISLGF+FLT GILSGAVWANEAWGSYW+WDPKETWAFITW +F I+LHTRTN + VNSA IVAS+GFLIIWICYFGVNL+GIGLHSYGSF Sbjct: 66 FPLSDLYESFIFLSWSFALIHIIPYFTKNTKFLSKIISPSAIFTQGFATSGLLTEIHQSSILVPALKSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNGKLFSGGNDFL--TESFLFGENLF--QKTSFF----SAKNYYRTQFIQQLDFWSYRVISLGFLFLTIGILSGAVWANEAWGSYWSWDPKETWAFITWIVFAIFLHTRTNLNLQSVNSAIVASIVASIGFLIIWICYFGVNLVGIGLHSYGSF 312
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_TRACE (Cytochrome c biogenesis protein ccsA OS=Trachelium caeruleum GN=ccsA PE=3 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 2.537e-79 Identity = 152/253 (60.08%), Postives = 178/253 (70.36%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H + K N+N LS ITA S FTQGFATSG LT++++S ILVPALQ +WL+MHVSMM+L Y VIT RK K + + S F +IQY N++ ++F + S +NYY+ Q++QQLD WSYR+ISLGFIFLT GILSGAVWANEAWGSYW+WDPKETWAFITW IF IYLHTRTN + G NSAIVA +GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 66 FPLSNLYESLIFLSWSFSLIHIVAYLKKNKN-LSRITASSTIFTQGFATSGLLTEINKSGILVPALQSEWLIMHVSMMILSYAALLCGSLLSAALLVITCRK------KFNELLRLIESLSFDKIQYRNQRIHLFGKTYFFSVKNYYKIQLVQQLDYWSYRVISLGFIFLTMGILSGAVWANEAWGSYWSWDPKETWAFITWIIFAIYLHTRTNKNFWGANSAIVAVIGFLIIWICYFGVNLLGIGLHSYGSF 311
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_CUSEX (Cytochrome c biogenesis protein ccsA OS=Cuscuta exaltata GN=ccsA PE=3 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 6.909e-77 Identity = 147/251 (58.57%), Postives = 173/251 (68.92%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLSDL E H I F N LS IT+ S FTQGFATSG LT++ +S ILVPALQ +WL+MHVS+M+LGY VITFRK + F K K+F+ F+EI Y K +F+ + NYY+ Q+IQ+LD WSY++I LGFIFLT GILSGAVWANEAWGSYW+WDPKETWAFITW +F IYLHTR +G NSAIVAS+GFLIIWICYFGVNL+G+GLHSYGSF Sbjct: 66 FPLSDLSESLIFLSWSFALIHSIAYFTKNTKLLSTITSQSTVFTQGFATSGILTEIQKSSILVPALQSEWLIMHVSLMILGYAALLCGSLLSVALMVITFRKDGKFFSKSKDFL-------FTEIFY----KKIFV--FNYNNYYKTQLIQELDFWSYQVIGLGFIFLTIGILSGAVWANEAWGSYWSWDPKETWAFITWIVFAIYLHTRKKRSLQGTNSAIVASIGFLIIWICYFGVNLVGLGLHSYGSF 303
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_CUSRE (Cytochrome c biogenesis protein ccsA OS=Cuscuta reflexa GN=ccsA PE=3 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 1.179e-76 Identity = 146/251 (58.17%), Postives = 170/251 (67.73%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLSDL E H I F N LS IT+ S FTQGFATSG LTK+ +S IL+PAL+ +WL+MHVS+M+LGY VIT R + F K NF+ F EI Y N KN F A NYY+ Q+I++LD WSY++ISLGFIFLT GILSGAVWANEAWGSYW+WDPKETWAFITW +F IYLHTR N + NSAIVAS+GF+IIWICYFGVNL+G+GLHSYGSF Sbjct: 66 FPLSDLSESLIFLSWSFALIHSIGYFTKNLKFLSTITSQSTLFTQGFATSGILTKIQKSSILIPALKSEWLIMHVSLMILGYAALLCGSLLSVALMVITVRNDGKFFFKSNNFL-------FREISYQN--KNFFY----AINYYKTQLIKELDFWSYQVISLGFIFLTIGILSGAVWANEAWGSYWSWDPKETWAFITWIVFAIYLHTRININLQSTNSAIVASLGFIIIWICYFGVNLVGLGLHSYGSF 303
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_MARPO (Cytochrome c biogenesis protein ccsA OS=Marchantia polymorpha GN=ccsA PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 6.067e-65 Identity = 128/252 (50.79%), Postives = 152/252 (60.32%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS---LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYG 748 FPLS+LYE H I + K+ L ITAPSA T GFAT +M +S LVPALQ WLMMHV+MM+L Y +IT K L + F SF F + E + + + S N+ ++Q+I++LD WSYR+ISLGF LT GILSGAVWANEAWGSYWNWDPKETWA ITW IF IYLHTR W+G AI+AS+GF I+WICY GVNLLG GLHSYG Sbjct: 66 FPLSNLYESSMFLSWSFTLIHLILENKSKNTWLGIITAPSAMLTHGFATLSLPKEMQESVFLVPALQSHWLMMHVTMMMLSYSTLLCGSLLAITILIITLTKQKNLPILTSYFNFPFNSFIFKNLLQPMENEILSYKTQKVFSFINFRKWQLIKELDNWSYRVISLGFPLLTIGILSGAVWANEAWGSYWNWDPKETWALITWLIFAIYLHTRMIKGWQGKKPAIIASLGFFIVWICYLGVNLLGKGLHSYG 317
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_CYCTA (Cytochrome c biogenesis protein ccsA OS=Cycas taitungensis GN=ccsA PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 8.761e-64 Identity = 130/257 (50.58%), Postives = 160/257 (62.26%), Query Frame = 2 Query: 5 PLSDLYEXXXXXXXXXXXXHKIFDFKNNQNH-LSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRK---VIRLFLKRKN-----FVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYG 748 PLS+LYE H I + ++ ++ L AITAPS T GFATSG +M QS +LVPALQ WLMMHVSM++L Y +ITFR+ ++ L R N F N + Q ++ +N F LS N+ + ++ QQLD WSYR+I LGF+ LT GILSGAVWANEAWGS W+WDPKETWA ITW IF IYLHTR N W+ N AI+AS+G I+WICY GV+LLGIGLHSYG Sbjct: 66 PLSNLYESFMFLSWSSSVIHIILEVRSQKDRGLGAITAPSTMLTHGFATSGLPKEMQQSAMLVPALQSHWLMMHVSMILLSYATLLCGSLSSIAFLIITFRRNRRILSLLSARDNSFIWPFPSRNNLYLHE--QEKSDLQNTFY--LSFTNHRKCKLTQQLDYWSYRVIGLGFLLLTIGILSGAVWANEAWGSRWSWDPKETWALITWIIFAIYLHTRVNKGWQDENPAIIASLGSFIVWICYLGVDLLGIGLHSYG 318
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_PINTH (Cytochrome c biogenesis protein ccsA OS=Pinus thunbergii GN=ccsA PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 7.675e-60 Identity = 129/264 (48.86%), Postives = 153/264 (57.95%), Query Frame = 2 Query: 5 PLSDLYEXXXXXXXXXXXXHKIFDFKNNQNH-LSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITF---RKVI---------RLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS---LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYG 748 PLS+LYE H + + ++ + L AITAPSA T GFAT G +M +S +LVPALQ W MMHVSM++ Y VI R+VI R L +NF Y +EK+ L S+ NY + Q+I+QLD WSYR I LGF T G LSGA+WANEAWGSYW+WDPKETWA ITWTIF IYLHTR N W+G AIVAS+GF I+WI Y GVNLLGIGLHSYG Sbjct: 66 PLSNLYESFMFLSWSSSVFHILLEVRSRDDRWLGAITAPSAMLTHGFATLGLPEEMQRSGMLVPALQSHWSMMHVSMILFSYATLLCGSLASIALLVIMSGVNRQVIFGAMDNLFSRAILPNENF-------------YSHEKQKSDLQYTVYFSSTNYRKCQLIKQLDHWSYRAIGLGFSLSTIGTLSGAIWANEAWGSYWSWDPKETWALITWTIFAIYLHTRMNKGWQGEEPAIVASLGFFIVWIRYLGVNLLGIGLHSYG 316
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_WELMI (Cytochrome c biogenesis protein ccsA OS=Welwitschia mirabilis GN=ccsA PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 7.942e-57 Identity = 115/251 (45.82%), Postives = 140/251 (55.78%), Query Frame = 2 Query: 5 PLSDLYEXXXXXXXXXXXXHKIFDFKN-NQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 PLS+LYE D KN N + ITAPSA FT FAT +M QS+ L+PALQ WL+MHV+++ LGY I K + F + +Y E K + S +N+ + Q+I Q+D SY I +GF FLT GILSGAVWANEAWGSYW+WDPKE WA ITW IF Y+H R N WEG A+VAS+G +WICYFGVN+LGIG HSYG F Sbjct: 66 PLSNLYESLMFFSWNFCLIPFFIDIKNPNTQWIGVITAPSALFTHAFATLILPIEMQQSQRLIPALQSHWLIMHVTIIFLGYVTLLCGSLSSIALLAINLEKKLSFFT------------LYFRKEYSYENKRKAFHPYSFKNFRKSQMIHQIDNLSYYTIVIGFTFLTIGILSGAVWANEAWGSYWSWDPKEIWALITWLIFANYIHIRLNKGWEGNKPALVASLGLFFVWICYFGVNILGIGFHSYGWF 304
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_HETA4 (Cytochrome c biogenesis protein ccsA OS=Heterosigma akashiwo (strain CCMP452) GN=ccsA PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 6.723e-56 Identity = 111/254 (43.70%), Postives = 143/254 (56.30%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVI-TFRKVIRLFLKRKNFVHVNGSFCFSEIQY-MNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN 757 FPLS+LYE ++ +FK + A+ P QGFA+ T M +S LVPALQ WLM+HVSMM+L Y V+ +K++ ++ FV N F + + +N+ N+ + + R ++I LD WSYR I +GF FLT GI+SGAVWANEAWGSYW+WDPKETWA ITW IF YLH R W G +A + S GF I+W+CY GVN LG GLHSYG N Sbjct: 73 FPLSNLYESLMFLSCLLLFIYQFIEFKTRSRVIGALVLPLIVLVQGFASLSLPTAMQKSSPLVPALQSNWLMLHVSMMMLSYATLLLGSLFSILYLVLYKDKKILTKKSIKEQFVEENFVFQLTTSAFSLNQTSNIITEAKTDRQ----RLILSLDNWSYRTIGIGFPFLTMGIISGAVWANEAWGSYWSWDPKETWALITWLIFASYLHARLTKGWRGKRAAFLGSFGFFIVWVCYLGVNFLGKGLHSYGFLN 322
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_HETA2 (Cytochrome c biogenesis protein ccsA OS=Heterosigma akashiwo (strain NIES-293) GN=ccsA PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 6.723e-56 Identity = 111/254 (43.70%), Postives = 143/254 (56.30%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVI-TFRKVIRLFLKRKNFVHVNGSFCFSEIQY-MNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN 757 FPLS+LYE ++ +FK + A+ P QGFA+ T M +S LVPALQ WLM+HVSMM+L Y V+ +K++ ++ FV N F + + +N+ N+ + + R ++I LD WSYR I +GF FLT GI+SGAVWANEAWGSYW+WDPKETWA ITW IF YLH R W G +A + S GF I+W+CY GVN LG GLHSYG N Sbjct: 73 FPLSNLYESLMFLSCLLLFIYQFIEFKTRSRVIGALVLPLIVLVQGFASLSLPTAMQKSSPLVPALQSNWLMLHVSMMMLSYATLLLGSLFSILYLVLYKDKKILTKKSIKEQFVEENFVFQLTTSAFSLNQTSNIITEAKTDRQ----RLILSLDNWSYRTIGIGFPFLTMGIISGAVWANEAWGSYWSWDPKETWALITWLIFASYLHARLTKGWRGKRAAFLGSFGFFIVWVCYLGVNFLGKGLHSYGFLN 322 The following BLAST results are available for this feature:
BLAST of CV712683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712683 ID=CV712683; Name=CV712683; organism=Citrus sinensis; type=EST; length=831bpback to top |