CV712683
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_PORYE (Cytochrome c biogenesis protein ccsA OS=Porphyra yezoensis GN=ccsA PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 6.293e-54 Identity = 111/257 (43.19%), Postives = 142/257 (55.25%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRL--------FLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYG 748 FPLS+LYE H + K + A P A F FA+ +M ++ LVPAL+ WLMMHVS+M+L Y +IT K I L K KN + S++ + E+ N+ +NS R +++ +D SYR I LGF LT GI++GAVWANEAWGSYW+WDPKETWA ITW IF YLH+R W+G AI+AS+GFL++WICY GVN LG GLHSYG Sbjct: 66 FPLSNLYESLLFLAWGLTFVHLFIENKTKSRLIGATAIPVAMFVTAFASLALPLEMQKASPLVPALKSNWLMMHVSIMMLSYAILILGSLLSILFLIITKGKDINLKGSSIGTGSYKVKNTDAKSTLIFSSQVGIVQEQSNMLINST------RMNLLESIDNLSYRTIGLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHSRITKSWQGKKPAILASLGFLVVWICYLGVNFLGKGLHSYG 316
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_ODOSI (Cytochrome c biogenesis protein ccsA OS=Odontella sinensis GN=ccsA PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.073e-53 Identity = 110/249 (44.18%), Postives = 139/249 (55.82%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYG 748 FPLS+LYE + +FK + AI P A GFA M +S LVPALQ WLM+HVSMM+L Y VI+ + I L + ++ + + + Y K +F S + +++Q LD WSYRII LGF FLT GI++G VWANEAWGSYW+WDPKETWA ITW +F YLH+R WEG +AI+ +GF +IWICY GVN LG GLHSYG Sbjct: 67 FPLSNLYESLLFLTWTLLTIYLYVEFKTKSKLVGAILIPVALLINGFANLTLSVDMQKSSPLVPALQSNWLMLHVSMMMLSYGTLIMGSLLCILFLVISKYQDIDLQILDESSLPLYNIM----LDYYEAK--LFSPSDEVSELGKLKLLQSLDNWSYRIIGLGFPFLTIGIIAGGVWANEAWGSYWSWDPKETWALITWIVFATYLHSRITKGWEGKKTAILGGLGFFVIWICYLGVNFLGKGLHSYG 309
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_PORPU (Cytochrome c biogenesis protein ccsA OS=Porphyra purpurea GN=ccsA PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.831e-53 Identity = 111/257 (43.19%), Postives = 143/257 (55.64%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNF-------VHVNGSFCFSEIQ-YMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYG 748 FPLS+LYE H + K + A++ P A F FA+ +M ++ LVPAL+ WLMMHVS+M++ Y +IT + I L + N SF FS + E+ N+ +NS R +++ +D SYRII LGF LT GI++GAVWANEAWGSYW+WDPKETWA ITW IF YLH R W+G AI+AS+GFL++WICY GVN LG GLHSYG Sbjct: 66 FPLSNLYESLLFLAWGLTFVHLFIESKTKSRLIGAVSIPVAMFVTAFASLALPIEMQKASPLVPALKSNWLMMHVSIMMISYSILILGSLLSILFLIITRGQDINLKGSSVGTGSYTVKSLDSNPSFAFSNPSGIVQEQSNMLINST------RMNLLESIDNLSYRIIGLGFPLLTIGIVAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHCRITKSWQGKRPAILASVGFLVVWICYLGVNFLGKGLHSYG 316
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_GALSU (Cytochrome c biogenesis protein ccsA OS=Galdieria sulphuraria GN=ccsA PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.957e-53 Identity = 111/252 (44.05%), Postives = 146/252 (57.94%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTK-MHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE I +FK + AI +P + T F+ S FL K M + L+PAL+ WL+MHVS++++ Y + + ++ L L R N ++ + + N+ +L +N + ++ +D SYRII LGF FLT GI+SGAVWANEAWGSYW+WDPKETWA ITW IF IYLHTR N W+G SAIVA GF+++WICY GVN LG GLHSYG F Sbjct: 72 FPLSNLYESLLFLSWSLTTIQLILEFKFKHKLIGAIASPISTLTLAFS-SFFLPKYMQEVSPLIPALKSNWLLMHVSVILISYAMLL----------IGSLLSILFLLLSRNNKLNYTKNNNLTTASNSND-------TLILKNEDKLNLLNTIDNLSYRIIGLGFPFLTIGIISGAVWANEAWGSYWSWDPKETWALITWIIFAIYLHTRINKSWQGKKSAIVAGFGFVVVWICYLGVNFLGKGLHSYGWF 305
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_ADICA (Cytochrome c biogenesis protein ccsA OS=Adiantum capillus-veneris GN=ccsA PE=2 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 7.692e-52 Identity = 109/256 (42.58%), Postives = 145/256 (56.64%), Query Frame = 2 Query: 5 PLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRY--------QVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYG 748 PL +LYE + I + ++ A+ AP A FAT +M +LVPALQ QWLMMHVS M++ Y + + KV + L+ K SF F MN +KN++ + A NY + Q+I LD+W+ + ISLGF LT GILSGAVWANEAWGSYW+WDPKETWA +TW ++ IYLHT+ + + G A+ ASMGF ++WIC+ GVNLLG+GLH+YG Sbjct: 66 PLGNLYESLMFLSWGFSLLYLILEVRDQIGLSHAVLAPGAMLIHAFATLSLPQQMRSPTLLVPALQSQWLMMHVSAMLISYITLLCGSLLAITLLSLFYGKVGSVTLEHK---FEKQSFFF----LMNPRKNLWKQT-GAENYSYFLISNSRKCQLINCLDKWACQTISLGFSLLTIGILSGAVWANEAWGSYWSWDPKETWALVTWLVYAIYLHTKVDKRKMGEGPAMTASMGFFLVWICFLGVNLLGVGLHNYG 313
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_CHLRE (Cytochrome c biogenesis protein ccsA OS=Chlamydomonas reinhardtii GN=ccsA PE=1 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 4.221e-50 Identity = 109/255 (42.75%), Postives = 141/255 (55.29%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNN---QNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN 757 FPLS+LYE + ++ + L ++ AP + FAT +M Q+ LVPALQ WLMMHV++M++ Y + + ++ L L F H G+ +K + F+N+ LD SYRII LGF FLT GILSGAVWANEAWGSYW+WDPKETWA +TW +F IYLHTR WEG AI+A++GFL++W CY GVNL+G GLHSYG FN Sbjct: 136 FPLSNLYESLMFLAWCCTFLYLLYCTSFTLLVEKMLGSLIAPCSLLMNAFATFSLPKEMQQASPLVPALQSNWLMMHVTVMIISY----------ATLIIGSLLSILFLIL----FKHKKGT---------PKKYDNFINN--------------LDALSYRIIGLGFPFLTIGILSGAVWANEAWGSYWSWDPKETWALLTWLVFAIYLHTRLTKGWEGEKPAIIAAVGFLVVWFCYLGVNLIGEGLHSYGFFN 353
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_MESVI (Cytochrome c biogenesis protein ccsA OS=Mesostigma viride GN=ccsA PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.513e-50 Identity = 105/252 (41.67%), Postives = 138/252 (54.76%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLN-SLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS++YE H + + N + IT P A FAT M S LVPAL+ WL+MHV++M+ Y +T+ K I L G+ I +N++ N ++ + + ++ + +D SYR I +GF LT GI+SGAVWAN+AWGSYW+WDPKETWA ITW IF IYLHTR W+G AIVA +GF+I+W+CY GVNLLG GLHSYG F Sbjct: 66 FPLSNMYESLMFLCWCFTFFHLLIEKYIQINFIGFITVPIAMLVNAFATFFLPLDMQHSTPLVPALKSNWLIMHVTIMMASYAALILGSLLSIAFLFLTYNKQIEL----------QGN----SIGNINDEMNSYITIDIEFQKNESIELAKLIDNLSYRTIGIGFPLLTIGIISGAVWANDAWGSYWSWDPKETWALITWIIFAIYLHTRITKGWQGRRPAIVAFIGFVIVWVCYLGVNLLGQGLHSYGWF 303
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_GUITH (Cytochrome c biogenesis protein ccsA OS=Guillardia theta GN=ccsA PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.604e-49 Identity = 100/252 (39.68%), Postives = 134/252 (53.17%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN 757 FPLS+LYE ++K N + AI +P + F F+T M ++ LVPAL+ WLMMHVS+M+L Y V+ +K + H F F+ +++ K N + +++ LD SYR I GF LT GI++GAVWANEAWG+YW+WDPKETWA ITW +F YLH R W G A +A++GF+++WICY GVN LG GLHSYG N Sbjct: 68 FPLSNLYESLMFLTWGLLFSAIYLEYKTNLYLIGAIVSPISLFIVSFSTLSLPQDMQKAAPLVPALKSNWLMMHVSVMMLSYSTLIIGSLLAILYLVL---------IKAQQKKHSLKDFAFANLEFTFPKST---------NSTNFNLLETLDNLSYRTIGFGFPLLTIGIIAGAVWANEAWGTYWSWDPKETWALITWLVFAAYLHARITKSWTGERPAYLAALGFVVVWICYLGVNFLGKGLHSYGWLN 301
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_MICAN (Cytochrome c biogenesis protein ccsA OS=Microcystis aeruginosa (strain NIES-843) GN=ccsA PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.667e-49 Identity = 104/266 (39.10%), Postives = 139/266 (52.26%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVF---------------LNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FP+S+LYE H I ++ + + +T P A FAT +M S LVPAL+ WLMMHVS+M+L Y ++T + I L K G++ +F L +++ + R + + LD SYR+I LGF LT GI++GAVWANEAWGSYW+WDPKETWA ITW +F YLH R W+G AI+A+ GF+++W+CY GVNLLG GLHSYG F Sbjct: 66 FPISNLYESLFFLAWGVTAVHLIAEYTSRSRLVGVVTTPVAMGITAFATLSLPGEMQTSAPLVPALKSNWLMMHVSVMMLSYAALMVGSLMAIAFLIVTRGQNIEL----KGSSVGTGAYRLQNKLSTTLSAPIFMETANGGTTALLTPTLTAMATLSPQRLSLAETLDNISYRVIGLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHARITRGWQGRKPAILAASGFVVVWVCYLGVNLLGKGLHSYGWF 327
BLAST of CV712683 vs. ExPASy Swiss-Prot
Match: CCSA_NOSP7 (Cytochrome c biogenesis protein ccsA OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ccsA PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 7.960e-49 Identity = 107/287 (37.28%), Postives = 144/287 (50.17%), Query Frame = 2 Query: 2 FPLSDLYEXXXXXXXXXXXXHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXXVITFRKVIRL------------------------------------FLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 754 FPLS+LYE H I + + + +TAP A FAT ++M S LVPAL+ WLMMHVS+M+L Y ++T + I+L F + ++ + NG+ + + + + + S + R + + LD SYRII LGF LT GI++G VWANEAWGSYW+WDPKETWA ITW +F YLH R W+G AI+A+ GF+++WICY GVNLLG GLHSYG F Sbjct: 66 FPLSNLYESLFFLTWGITTVHLIAESSSRSRLVGVVTAPVAMLIAAFATMTLPSQMQASEPLVPALKSNWLMMHVSVMMLSYSALMVGALLAIAFLIVTRGQNIQLQGSSVGTGGYRSNGYRLHKAAELISQPPAPSAENNGFARFESSSNGNGNANTAVLNLVTTSEPQTVASAEPLSPQRLSLAETLDNISYRIIGLGFPLLTIGIIAGGVWANEAWGSYWSWDPKETWALITWLVFAAYLHARITRGWQGRRPAILAATGFVVVWICYLGVNLLGKGLHSYGWF 352 The following BLAST results are available for this feature:
BLAST of CV712683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712683 ID=CV712683; Name=CV712683; organism=Citrus sinensis; type=EST; length=831bpback to top |