CV712660

Overview
NameCV712660
Unique NameCV712660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 6.604e-49
Identity = 99/186 (53.23%), Postives = 128/186 (68.82%), Query Frame = 3
Query:  189 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            +I +TK  INGQF+DAASGKTF   DPR  EVIA +AEGD ED+D AV  AR AFD GPWP+MT +ER++++ + ADLIE+N+EELA L+  + GK +     +++P       Y AG ADKIHG T+     +    TL EPIGV G I+PWNFP ++F  KVAPA+  G T+V+K AEQT L+A
Sbjct:   16 EIKFTKLFINGQFIDAASGKTFETIDPRNGEVIATIAEGDKEDVDLAVNAARYAFDHGPWPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGAADKIHGETLKMTRQSLFGYTLKEPIGVVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSLSA 201          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 8.625e-49
Identity = 93/187 (49.73%), Postives = 125/187 (66.84%), Query Frame = 3
Query:  186 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            +++ +TK  IN ++ ++ SGK F   +P T E I  V EGD  D+D+AV  A+ AF  G PW ++    R R++ + ADL+E++   LAALET + GKP++ +   ++   +R L Y+AGWADKI G T+P D N    T HEPIGV G I PWNFPLL+  WK+APAL CGNT+VLK AEQTPLTA
Sbjct:   27 LEVKFTKIFINNEWHESKSGKKFATCNPSTREQICEVEEGDKPDVDKAVEAAQVAFQRGSPWRRLDALSRGRLLHQLADLVERDRATLAALETMDTGKPFLHAFFIDLEGCIRTLRYFAGWADKIQGKTIPTDDNVVCFTRHEPIGVCGAITPWNFPLLMLVWKLAPALCCGNTMVLKPAEQTPLTA 213          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.921e-48
Identity = 93/187 (49.73%), Postives = 126/187 (67.38%), Query Frame = 3
Query:  186 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            ++I +TK  IN ++ D+ SGKTFPV++P T E I  V E D ED+D+AV  AR+AF  G PW  M   ER +++ + ADLIE++   LA LE+ N GK +  +   ++   +++L Y AGWADKI G T+P DG +   T HEPIGV GQI PWN P++L   K+ PAL CGNT+++K AEQTPLTA
Sbjct:   16 IKIQHTKLFINNEWHDSVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKIFASAYLMDLDYCIKVLRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGQIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTA 202          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 2.509e-48
Identity = 93/197 (47.21%), Postives = 132/197 (67.01%), Query Frame = 3
Query:  168 EPIIPP----VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            +P +P     ++I +TK  IN ++ ++ +GK FPV +P T EVI +V EGD  D+D+AV  AR+AF  G PW  M   ER  ++ + ADL+E++   LA +E+ N GK +  +   +  + ++ L Y+AGWADKIHG T+P DG+    T  EPIGV GQI+PWN PL+LF WK+  AL+CGNT+++K AEQTPLTA
Sbjct:    6 QPAVPAPLANLKIQHTKIFINNEWHNSLNGKKFPVINPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGCLLNKLADLMERDRVLLATMESMNAGKIFTHAYLLDTEVSIKALKYFAGWADKIHGQTIPSDGDVFTYTRREPIGVCGQIIPWNGPLILFIWKIGAALSCGNTVIVKPAEQTPLTA 202          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: CROM_ENTDO (Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 3.277e-48
Identity = 91/186 (48.92%), Postives = 127/186 (68.28%), Query Frame = 3
Query:  189 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            +I +TK  IN QFVD+ +GK + V +P T + I +V EG   DID+AV   + AF  G PW +M    R  ++ R ADL E+++  L++LET N GKPY +S   ++   +++L YYAGWADK  G  +P DG++   T HEP+G+ G I+PWN+P+L+ TWK+APAL+CGN IV+K AEQTPLTA
Sbjct:   12 EIKFTKIFINNQFVDSVNGKAYSVINPCTTKKICDVQEGSKADIDKAVQACKLAFKRGTPWRRMDASRRGHLLYRLADLFERDIAYLSSLETLNTGKPY-KSAYQDIVHCIQVLRYYAGWADKNMGQNIPVDGDFFSFTKHEPVGICGLIIPWNYPMLMMTWKMAPALSCGNCIVVKPAEQTPLTA 196          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH_ENCBU (Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN=ALDH PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.245e-47
Identity = 98/199 (49.25%), Postives = 129/199 (64.82%), Query Frame = 3
Query:  150 TAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFD-EGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            +A  + EP+   +++ +TK  IN +FVD+ SGKTF   +P T E +A V EGD  DID+AVA AR AF  +  + K    +R R++ + ADLIE +  +L  LET +NGKP+  S   +  M  ++L YYAG+ADKI G T+P DGN    T HEP+GV G I PWNFPL L   K+APA+  G T+VLK AEQTPLTA
Sbjct:    2 SAPKIPEPV-KDLKVEFTKIFINNEFVDSVSGKTFATINPSTGEKLAEVQEGDKADIDKAVAAARAAFKRDAEYRKHDASDRGRLLFKLADLIEAHRVQLRTLETLDNGKPFAMSYLGDTLMAQKVLRYYAGFADKIVGQTIPADGNVFCYTRHEPVGVVGAITPWNFPLHLAASKIAPAIAAGCTLVLKPAEQTPLTA 199          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: AL1A3_RAT (Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.245e-47
Identity = 90/187 (48.13%), Postives = 122/187 (65.24%), Query Frame = 3
Query:  186 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            +++ +TK  IN  + +  SG+ F  Y+P T E I  V EGD  D+D+AV  A+ AF  G PW ++    R +++ + ADLIE++   LA LET + GKP++ +   ++   ++   Y+AGWADKI G T+P D N    T HEPIGV G I PWNFPLL+  WK+APAL CGNT+VLK AEQTPLTA
Sbjct:   27 LEVKFTKIFINNDWHEPKSGRKFATYNPSTLEKICEVEEGDKPDVDKAVEAAQAAFQRGSPWRRLDALSRGQLLHQLADLIERDRAILATLETMDTGKPFLHAFFVDLEGCIKTFRYFAGWADKIQGRTIPTDDNVMCFTRHEPIGVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTA 213          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: AL1A3_MOUSE (Aldehyde dehydrogenase family 1 member A3 OS=Mus musculus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.245e-47
Identity = 89/187 (47.59%), Postives = 123/187 (65.78%), Query Frame = 3
Query:  186 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            +++ +TK  IN  + ++ SG+ F  Y+P T E I  V EGD  D+D+AV  A+ AF  G PW ++    R +++ + ADL+E++   LA LET + GKP++ +   ++   ++   Y+AGWADKI G T+P D N    T HEPIGV G I PWNFPLL+  WK+APAL CGNT+VLK AEQTPLTA
Sbjct:   27 LEVKFTKIFINNDWHESKSGRKFATYNPSTLEKICEVEEGDKPDVDKAVEAAQAAFQRGSPWRRLDALSRGQLLHQLADLVERDRAILATLETMDTGKPFLHAFFVDLEGCIKTFRYFAGWADKIQGRTIPTDDNVVCFTRHEPIGVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTA 213          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.733e-47
Identity = 91/187 (48.66%), Postives = 124/187 (66.31%), Query Frame = 3
Query:  186 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            ++I +TK  IN ++ ++ SGKTFPV++P T E I  V E D ED+D+AV  AR+AF  G PW  M   ER +++ + ADLIE++   LA LE+ N GK +  +   ++   ++ L Y AGWADKI G T+P DG +   T HEPIGV G I PWN P++L   K+ PAL CGNT+++K AEQTPLTA
Sbjct:   16 IKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTA 202          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 5.232e-46
Identity = 89/177 (50.28%), Postives = 125/177 (70.62%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            IN +FV    GKTF V +P   +VI +V E   +D+D AVA AR AF EGPW ++TP ER  ++ + ADL+E++++ LAA+E+ +NGK +  + K ++   +  L YYAGWADKIHG T+  +      T HEP+GV GQI+PWNFPLL+++WK+ PA+  GNT+VLK+AEQTPL+A
Sbjct:   23 INNEFVKGVEGKTFQVINPSNEKVITSVHEATEKDVDVAVAAARAAF-EGPWRQVTPSERGILINKLADLMERDIDTLAAIESLDNGKAFTMA-KVDLANSIGCLRYYAGWADKIHGQTIDTNPETLTYTRHEPVGVCGQIIPWNFPLLMWSWKIGPAVAAGNTVVLKTAEQTPLSA 197          
The following BLAST results are available for this feature:
BLAST of CV712660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
AL2C4_ARATH6.604e-4953.23Aldehyde dehydrogenase family 2 member C4 OS=Arabi... [more]
AL1A3_HUMAN8.625e-4949.73Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
ALDH1_MACPR1.921e-4849.73Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelid... [more]
AL1A7_RAT2.509e-4847.21Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norv... [more]
CROM_ENTDO3.277e-4848.92Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=... [more]
ALDH_ENCBU1.245e-4749.25Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN... [more]
AL1A3_RAT1.245e-4748.13Aldehyde dehydrogenase family 1 member A3 OS=Rattu... [more]
AL1A3_MOUSE1.245e-4747.59Aldehyde dehydrogenase family 1 member A3 OS=Mus m... [more]
ALDH1_ELEED4.733e-4748.66Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]
ALDH_EMENI5.232e-4650.28Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L13_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712660 ID=CV712660; Name=CV712660; organism=Citrus sinensis; type=EST; length=744bp
GTTGAATAGGTCGCTTCTTCGCTTTGGCTATGGCAGCTGCTCGCAGAATC
TCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCTTCTCCTTCTCTGCTTCG
CTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCAGGTTTAGCA
CAGCTGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAAATTAGTTAC
ACTAAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATCAGGCAAAAC
ATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTAATGTTGCTG
AAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCTCGCAAGGCA
TTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGAT
TATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGGAGCTGGCAG
CTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCTCTCAAATCT
GAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGGATGGGCTGA
TAAAATCCACGGACTAACTGTCCCTGGTGATGGAAATTACCATATTCAAA
CTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTT
CCTCTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAACTTGTGGCAA
TACTATTGTTCTAAAGTCTGCTGAGCAAACGCCTTTGACTGCTC
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