CV712660

Overview
NameCV712660
Unique NameCV712660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH_ALTAL (Aldehyde dehydrogenase OS=Alternaria alternata GN=ALTA10 PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.834e-46
Identity = 93/180 (51.67%), Postives = 120/180 (66.67%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL---TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            IN +FV A  GKTF V +P T EVI +V E   +D+D AVA ARKAF+ GPW K TP  R +++ + ADL EKN + +AA+E  +NGK +  +   +VP     L YY GWADKI G    T P   NY      EPIGV GQI+PWNFP+L+++WK+ PA+  GNT+VLK+AEQTPL+A
Sbjct:   22 INNEFVKAVDGKTFDVINPSTEEVICSVQEATEKDVDIAVAAARKAFN-GPWRKETPENRGKLLNKLADLFEKNADLIAAVEALDNGKAFSMAKNVDVPAAAGCLRYYGGWADKIEGKVVDTAPDSFNY---IRKEPIGVCGQIIPWNFPILMWSWKIGPAIATGNTVVLKTAEQTPLSA 197          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH2_LEITA (Aldehyde dehydrogenase, mitochondrial OS=Leishmania tarentolae GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.430e-45
Identity = 99/198 (50.00%), Postives = 129/198 (65.15%), Query Frame = 3
Query:  153 AAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE-RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            A +    + P V     K LING+FV A SGKTF V +P   +VIANVAE +  D+D AV  AR AF+     +MT  + R  +MLR AD++EKN +E+AALE+ +NGKPY  +L  +V + V    Y AG ADK++G   P  GN+      +PIGV GQI+PWNFPLL+  +K++PAL  GNT+VLK AEQTPLTA
Sbjct:    4 ATLARLEMAPKVTHIQEKLLINGKFVPAVSGKTFEVVNPADEKVIANVAEAEKADVDLAVKAARHAFESF---RMTDCQWRRNLMLRLADILEKNSKEMAALESLDNGKPYEVALNVDVALSVECFRYCAGLADKVNGTVPPRSGNFLGIVKRQPIGVCGQIIPWNFPLLMAAFKLSPALAMGNTVVLKPAEQTPLTA 198          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: CROM_OMMSL (Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 5.785e-45
Identity = 88/194 (45.36%), Postives = 128/194 (65.98%), Query Frame = 3
Query:  177 IPPV----QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            IPP     +I + K  IN QFV++ S K +PVY+P   E +  V EGD  DID+AV   + AF  G PW +M       ++ R ADL+E+++  +A+LET + GKPY  S +  V  + ++L Y+AGWADK  G ++P DG++   T +EP+GV G ++P+N+P+L+ TWK+APAL CGN +++K AEQTPLTA
Sbjct:    4 IPPPTRNPEIKHNKIFINNQFVNSTSNKAYPVYNPCDNEKVCEVQEGDKSDIDKAVQACKAAFKRGTPWRRMDASRLGHLLYRLADLMERDIAYMASLETMDTGKPYKNSYQDMVHCI-QVLRYFAGWADKNMGESIPVDGDFFCYTRNEPVGVCGLLIPYNYPMLMMTWKMAPALACGNCMIVKPAEQTPLTA 196          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: AL1B1_BOVIN (Aldehyde dehydrogenase X, mitochondrial (Fragment) OS=Bos taurus GN=ALDH1B1 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.289e-44
Identity = 93/203 (45.81%), Postives = 131/203 (64.53%), Query Frame = 3
Query:  138 SRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            +++ +AA +  PI P   I   +  I+ ++ DA S KTFP   P T EVI +VAEGD  D+D A   AR AF  G PW  M   +R  ++   ADL+E++   LA+LE+ +NGKP+ +S   ++  V+++  Y+AGWADK HG T+P DG +   T HEP+GV  QI+PWNFPL++ +WK+A AL  GNT+V K AEQTP +A
Sbjct:   11 TQYFSAAALPSPI-PNPDIPDNQLFISNKWHDAVSKKTFPTVSPATGEVIGHVAEGDWADVDLAAKAARAAFRLGSPWRWMDALKRGWLLNHLADLVERDCVYLASLESLDNGKPFQESYVLDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCCQIIPWNFPLVMQSWKLALALAMGNTVVTKVAEQTPFSA 212          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: FTHFD_XENTR (10-formyltetrahydrofolate dehydrogenase OS=Xenopus tropicalis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.425e-43
Identity = 85/181 (46.96%), Postives = 117/181 (64.64%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            INGQF+DA  GKT+   +P     I  V+     DIDRAVA A++AF+ G W KM P +R RI+ R AD++E++ EELA +E+ ++G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EPIGV G ++PWN+PL++  WK A  L  GNT+VLK A+ TPLTA
Sbjct:  426 INGQFIDAEGGKTYDTVNPTDGTAICKVSLAQVSDIDRAVAAAKEAFENGEWGKMNPRDRGRILYRLADIMEEHQEELATIESIDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTFTRREPIGVCGIVIPWNYPLMMLAWKTAACLAAGNTVVLKPAQVTPLTA 606          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: FTHFD_XENLA (10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.431e-43
Identity = 85/181 (46.96%), Postives = 118/181 (65.19%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            INGQF+DA  GK++   +P     I  V+     DIDRAVA A++AF+ G W KM P +R R++ R ADL+E++ EELA +E+ ++G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EPIGV G ++PWN+PL++  WK A  LT GNT+VLK A+ TPLTA
Sbjct:  426 INGQFMDAEGGKSYDTINPTDGTAICKVSLAQISDIDRAVAAAKEAFENGEWGKMNPRDRGRLLYRLADLMEEHQEELATIESIDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGRTIPINQARPNRNLTFTRREPIGVCGIVIPWNYPLMMLAWKTAACLTAGNTVVLKPAQVTPLTA 606          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: YF19_SCHPO (Putative aldehyde dehydrogenase-like protein C9E9.09c OS=Schizosaccharomyces pombe GN=SPAC9E9.09c PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.174e-43
Identity = 93/203 (45.81%), Postives = 122/203 (60.10%), Query Frame = 3
Query:  147 STAAVVEEPIIPPVQISYTKNL---INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFD-EGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            ST  V    I  P   +Y + +   IN Q VD+  G    VY P T ++I  VA+ D ED+D AV  AR AF  + PW K +  +R R + R AD IE+N+E LA++ET +NGK  +   + +V        YY GWADK +G T+  D      T HEPIGV GQI+PWNFP L+  WK+APA+ CGNTI+LK+AE TPL+A
Sbjct:    2 STKLVDHVEITVPTGKTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTDAPWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKS-ITLARGDVQAAADCFRYYGGWADKDYGQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLSA 203          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH_ASPNG (Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.415e-43
Identity = 89/192 (46.35%), Postives = 121/192 (63.02%), Query Frame = 3
Query:  174 IIPPVQISYTKNL---INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 740
            I  P  + Y + L   I+G+FV  A GKTF   +P   + I  V E   +D+D AVA ARKAF EG W ++TP  R R++ + ADL E++ E LA++E  +NGK    +   ++      L YY GWADKIHG T+  +      T HEPIGV GQI+PWNFPLL++ WK+ PA+  GNT+V+K+AEQTPL+
Sbjct:    8 ITTPNGVKYEQPLGLFIDGEFVKGAEGKTFETINPSNEKPIVAVHEATEKDVDTAVAAARKAF-EGSWRQVTPSTRGRMLTKLADLFERDAEILASIEALDNGKSITMA-HGDIAGAAGCLRYYGGWADKIHGQTIDTNSETLNYTRHEPIGVCGQIIPWNFPLLMWAWKIGPAIATGNTVVIKTAEQTPLS 197          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.206e-42
Identity = 91/178 (51.12%), Postives = 115/178 (64.61%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL---TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 737
            IN +FV    GKTF V +P    VI  V E   +D+D AVA ARKAF EG W + TP  R +++   A+L EKN++ LAA+E+ +NGK  +   K ++ M V  L YY GWADKI G    T P   NY      EPIGV GQI+PWNFPLL++ WK+ PA+ CGNT+VLK+AEQTPL
Sbjct:   22 INNEFVKGQEGKTFDVINPSDESVITQVHEATEKDVDIAVAAARKAF-EGSWRQETPENRGKLLNNLANLFEKNIDLLAAVESLDNGKA-ISMAKGDISMCVGCLRYYGGWADKITGKVIDTTPDTFNY---VKKEPIGVCGQIIPWNFPLLMWAWKIGPAIACGNTVVLKTAEQTPL 194          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: AL1L2_MOUSE (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Mus musculus GN=Aldh1l2 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.584e-42
Identity = 86/190 (45.26%), Postives = 118/190 (62.11%), Query Frame = 3
Query:  186 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            V+I Y +  INGQFVDA  G+T+   +P     I  V+     D+DRAVA A+ AF+ G W +M   +R R+M R ADL+E+N EELA +E  ++G  Y  +LK+ + M V+   Y+AGW DKI G T+P      NY++  T  EP+G    I+PWN+PL++  WK A  L  GNT+VLK A+ TPLTA
Sbjct:  439 VKIPY-QCFINGQFVDAEDGETYATVNPTDGTTICRVSHASLADVDRAVAAAKDAFENGEWGRMNARDRGRLMYRLADLMEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGSTIPINQARPNYNLTFTKKEPLGACAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTA 627          
The following BLAST results are available for this feature:
BLAST of CV712660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
ALDH_ALTAL6.834e-4651.67Aldehyde dehydrogenase OS=Alternaria alternata GN=... [more]
ALDH2_LEITA4.430e-4550.00Aldehyde dehydrogenase, mitochondrial OS=Leishmani... [more]
CROM_OMMSL5.785e-4545.36Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3[more]
AL1B1_BOVIN1.289e-4445.81Aldehyde dehydrogenase X, mitochondrial (Fragment)... [more]
FTHFD_XENTR1.425e-4346.9610-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
FTHFD_XENLA2.431e-4346.9610-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
YF19_SCHPO3.174e-4345.81Putative aldehyde dehydrogenase-like protein C9E9.... [more]
ALDH_ASPNG5.415e-4346.35Aldehyde dehydrogenase OS=Aspergillus niger GN=ald... [more]
ALDH_CLAHE1.206e-4251.12Aldehyde dehydrogenase OS=Cladosporium herbarum GN... [more]
AL1L2_MOUSE4.584e-4245.26Probable 10-formyltetrahydrofolate dehydrogenase A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L13_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712660 ID=CV712660; Name=CV712660; organism=Citrus sinensis; type=EST; length=744bp
GTTGAATAGGTCGCTTCTTCGCTTTGGCTATGGCAGCTGCTCGCAGAATC
TCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCTTCTCCTTCTCTGCTTCG
CTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCAGGTTTAGCA
CAGCTGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAAATTAGTTAC
ACTAAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATCAGGCAAAAC
ATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTAATGTTGCTG
AAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCTCGCAAGGCA
TTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGAT
TATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGGAGCTGGCAG
CTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCTCTCAAATCT
GAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGGATGGGCTGA
TAAAATCCACGGACTAACTGTCCCTGGTGATGGAAATTACCATATTCAAA
CTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTT
CCTCTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAACTTGTGGCAA
TACTATTGTTCTAAAGTCTGCTGAGCAAACGCCTTTGACTGCTC
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