CV712660

Overview
NameCV712660
Unique NameCV712660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: AL1L2_HUMAN (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Homo sapiens GN=ALDH1L2 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.971e-41
Identity = 83/181 (45.86%), Postives = 112/181 (61.88%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            INGQF DA  GKT+   +P     I  V+     D+D+AVA A+ AF+ G W +M   ER R+M R ADL+E+N EELA +E  ++G  Y  +LK+ + M V+   Y+AGW DKI G T+P      N ++  T  EP+GV   I+PWN+PL++  WK A  L  GNT+VLK A+ TPLTA
Sbjct:  447 INGQFTDADDGKTYDTINPTDGSTICKVSYASLADVDKAVAAAKDAFENGEWGRMNARERGRLMYRLADLLEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGSTIPINQARPNRNLTFTKKEPLGVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTA 627          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAST (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae GN=ALD5 PE=1 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 2.515e-40
Identity = 89/208 (42.79%), Postives = 127/208 (61.06%), Query Frame = 3
Query:  129 RGISRFSTAAVVEEPIIPPVQISY---TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            R + R  + A +  PI  P   +Y   T   ING+FV +   KTF V +P   E I  V +   +D+D AVA A+KAF E  W  + P  R++ +   ADL+EK+ E LAA+E+ +NGK    + + +V +V + L    GWADKI+G  +    N+   ++ EP+GV GQI+PWNFPLL+++WK+ PAL  GNT+VLK AE TPL+A
Sbjct:   17 RSLLRLYSQAPLRVPITLPNGFTYEQPTGLFINGEFVASKQKKTFDVINPSNEEKITTVYKAMEDDVDEAVAAAKKAF-ETKWSIVEPEVRAKALFNLADLVEKHQETLAAIESMDNGKSLFCA-RGDVALVSKYLRSCGGWADKIYGNVIDTGKNHFTYSIKEPLGVCGQIIPWNFPLLMWSWKIGPALATGNTVVLKPAETTPLSA 222          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAS7 (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) GN=ALD5 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.515e-40
Identity = 89/208 (42.79%), Postives = 127/208 (61.06%), Query Frame = 3
Query:  129 RGISRFSTAAVVEEPIIPPVQISY---TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            R + R  + A +  PI  P   +Y   T   ING+FV +   KTF V +P   E I  V +   +D+D AVA A+KAF E  W  + P  R++ +   ADL+EK+ E LAA+E+ +NGK    + + +V +V + L    GWADKI+G  +    N+   ++ EP+GV GQI+PWNFPLL+++WK+ PAL  GNT+VLK AE TPL+A
Sbjct:   17 RSLLRLYSQAPLRVPITLPNGFTYEQPTGLFINGEFVASKQKKTFDVINPSNEEKITTVYKAMEDDVDEAVAAAKKAF-ETKWSIVEPEVRAKALFNLADLVEKHQETLAAIESMDNGKSLFCA-RGDVALVSKYLRSCGGWADKIYGNVIDTGKNHFTYSIKEPLGVCGQIIPWNFPLLMWSWKIGPALATGNTVVLKPAETTPLSA 222          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: FTHFD_MOUSE (10-formyltetrahydrofolate dehydrogenase OS=Mus musculus GN=Aldh1l1 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.318e-40
Identity = 78/181 (43.09%), Postives = 114/181 (62.98%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A++AF+ G W K+   +R R++ R ADL+E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EP+GV G ++PWN+PL++ +WK A  L  GNT+V+K A+ TPLTA
Sbjct:  426 IGGEFVDAEGAKTYSTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTA 606          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: FTHFD_PONAB (10-formyltetrahydrofolate dehydrogenase OS=Pongo abelii GN=ALDH1L1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.558e-40
Identity = 79/181 (43.65%), Postives = 114/181 (62.98%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A+ AF+ G W K++  +R R++ R ADL+E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EP+GV G I+PWN+PL++ +WK A  L  GNT+V+K A+ TPLTA
Sbjct:  426 IGGEFVDAEGAKTYETINPTDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGKISARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTA 606          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: FTHFD_RAT (10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus GN=Aldh1l1 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.248e-39
Identity = 77/181 (42.54%), Postives = 114/181 (62.98%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A++AF+ G W K+   +R R++ R AD++E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EP+GV G ++PWN+PL++ +WK A  L  GNT+V+K A+ TPLTA
Sbjct:  426 IGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDRGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTA 606          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH4_YEAST (Potassium-activated aldehyde dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=ALD4 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.248e-39
Identity = 83/194 (42.78%), Postives = 122/194 (62.89%), Query Frame = 3
Query:  171 PIIPPVQISY---TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            PI  P  + Y   T   IN +FV +   KTF V +P T E I ++ EG  +D++ AV  A +AF  G W  + P +R + + R A+LIE++ + +A++ET +NGK  + S + +V +V+  L   AG+ADKI G  +     +   T  +P+GV GQI+PWNFPLL++ WK+APAL  GNT+VLK+AE TPL+A
Sbjct:   32 PIKLPNGLEYEQPTGLFINNKFVPSKQNKTFEVINPSTEEEICHIYEGREDDVEEAVQAADRAFSNGSWNGIDPIDRGKALYRLAELIEQDKDVIASIETLDNGKA-ISSSRGDVDLVINYLKSSAGFADKIDGRMIDTGRTHFSYTKRQPLGVCGQIIPWNFPLLMWAWKIAPALVTGNTVVLKTAESTPLSA 224          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: FTHFD_HUMAN (10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens GN=ALDH1L1 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.630e-39
Identity = 80/181 (44.20%), Postives = 113/181 (62.43%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G+FVDA   KT    +P    VI  V+     D+D+AVA A+ AF+ G W K++  +R R+M R ADL+E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EP+GV G I+PWN+PL++ +WK A  L  GNT+V+K A+ TPLTA
Sbjct:  426 IGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTA 606          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURCM (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.354e-38
Identity = 82/177 (46.33%), Postives = 110/177 (62.15%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+AR+   E  W  MT  +RSRI+ RA DL+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTA
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAREGQRE--WAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURA4 (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.354e-38
Identity = 82/177 (46.33%), Postives = 110/177 (62.15%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+AR+   E  W  MT  +RSRI+ RA DL+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTA
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAREGQRE--WAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTA 185          
The following BLAST results are available for this feature:
BLAST of CV712660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
AL1L2_HUMAN2.971e-4145.86Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
ALDH5_YEAST2.515e-4042.79Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
ALDH5_YEAS72.515e-4042.79Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
FTHFD_MOUSE7.318e-4043.0910-formyltetrahydrofolate dehydrogenase OS=Mus mus... [more]
FTHFD_PONAB9.558e-4043.6510-formyltetrahydrofolate dehydrogenase OS=Pongo a... [more]
FTHFD_RAT1.248e-3942.5410-formyltetrahydrofolate dehydrogenase OS=Rattus ... [more]
ALDH4_YEAST1.248e-3942.78Potassium-activated aldehyde dehydrogenase, mitoch... [more]
FTHFD_HUMAN1.630e-3944.2010-formyltetrahydrofolate dehydrogenase OS=Homo sa... [more]
BETB_BURCM2.354e-3846.33Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
BETB_BURA42.354e-3846.33Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L13_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712660 ID=CV712660; Name=CV712660; organism=Citrus sinensis; type=EST; length=744bp
GTTGAATAGGTCGCTTCTTCGCTTTGGCTATGGCAGCTGCTCGCAGAATC
TCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCTTCTCCTTCTCTGCTTCG
CTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCAGGTTTAGCA
CAGCTGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAAATTAGTTAC
ACTAAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATCAGGCAAAAC
ATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTAATGTTGCTG
AAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCTCGCAAGGCA
TTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGAT
TATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGGAGCTGGCAG
CTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCTCTCAAATCT
GAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGGATGGGCTGA
TAAAATCCACGGACTAACTGTCCCTGGTGATGGAAATTACCATATTCAAA
CTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTT
CCTCTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAACTTGTGGCAA
TACTATTGTTCTAAAGTCTGCTGAGCAAACGCCTTTGACTGCTC
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