CV712660

Overview
NameCV712660
Unique NameCV712660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: PUUC_ECOLI (Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=puuC PE=3 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 4.016e-38
Identity = 75/177 (42.37%), Postives = 110/177 (62.15%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            ING++  AA  +TF   DP T   +A +A G + DIDRA++ AR  F+ G W   +P +R  ++ + ADL+E + EELA LET + GKP   SL+ ++P   R + +YA   DK++G       +     + EP+GV   IVPWNFPLLL  WK+ PAL  GN+++LK +E++PL+A
Sbjct:   24 INGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAMSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSA 200          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURS3 (Betaine aldehyde dehydrogenase OS=Burkholderia sp. (strain 383) GN=betB PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.016e-38
Identity = 82/177 (46.33%), Postives = 110/177 (62.15%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+A++   E  W  MT  +RSRI+ RA DL+ +  +ELAALET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTA
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQRE--WAAMTAMQRSRILRRAVDLLRERNDELAALETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURCJ (Betaine aldehyde dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=betB PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.850e-38
Identity = 81/177 (45.76%), Postives = 110/177 (62.15%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+A++   E  W  MT  +RSRI+ RA DL+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTA
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQRE--WAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURCC (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=betB PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.850e-38
Identity = 81/177 (45.76%), Postives = 110/177 (62.15%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+A++   E  W  MT  +RSRI+ RA DL+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTA
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQRE--WATMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURVG (Betaine aldehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=betB PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.168e-37
Identity = 80/177 (45.20%), Postives = 110/177 (62.15%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+A++   E  W  +T  +RSRI+ RA DL+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTA
Sbjct:   11 IGGAYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQQGQRE--WAALTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURCH (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=betB PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.993e-37
Identity = 80/177 (45.20%), Postives = 110/177 (62.15%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+A++   E  W  MT  +RSRI+ RA +L+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTA
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQRE--WAAMTAMQRSRILRRAVELLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURCA (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=betB PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.993e-37
Identity = 80/177 (45.20%), Postives = 110/177 (62.15%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+A++   E  W  MT  +RSRI+ RA +L+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTA
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQRE--WAAMTAMQRSRILRRAVELLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURM1 (Betaine aldehyde dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=betB PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.399e-37
Identity = 78/177 (44.07%), Postives = 111/177 (62.71%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G +VDA SGKTF  +DP T +++A V +  A D+DRA+A+A++   E  W  MT  +RSRI+ RA +L+ +  +ELAALET + GKP  ++L  ++     ++ YYAG A  I GL VP   +  + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPL+A
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGDLLAQVQQASAADVDRAIASAQEGQRE--WAAMTAMQRSRILRRAVELLRERNDELAALETRDTGKPIAETLAVDIVTGADVIEYYAGLATAIEGLQVPLRADSFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLSA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH_AGABI (Aldehyde dehydrogenase OS=Agaricus bisporus GN=aldA PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.373e-36
Identity = 73/177 (41.24%), Postives = 108/177 (61.02%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            ING+FVD     T  V +P   ++I  ++E    DID AV  A KAF+       +  +R  ++ + A L+EKN+++L+A+E  +NGK ++ +   ++ + +  + +YAGWADK  G  +  D      + HEPIGV GQI+PWNFPLL+  WK+ PAL  GN IVLK +E TPL+A
Sbjct:   26 INGEFVDGVKNTTIDVVNPANGKLITKISEATEADIDIAVEAAHKAFETTWGLNCSGSKRGDMLYKLAQLMEKNIDDLSAIEALDNGKTFLWAKSVDLSLSISTIKHYAGWADKNFGQVIETDEKKLTYSRHEPIGVVGQIIPWNFPLLMLAWKIGPALATGNCIVLKPSEFTPLSA 202          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BACSU (Betaine aldehyde dehydrogenase OS=Bacillus subtilis GN=gbsA PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.094e-35
Identity = 77/177 (43.50%), Postives = 115/177 (64.97%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 740
            I+G+++ A   +   + +P   E IA V+EG  ED  +A+A AR+AFD+G W  ++  ER +I+L+ A+LI +++EELA LE+ + GK   +S K+++  +  +  YYAG ADK  G  +     +   + + EPIGV GQI PWN+PLL  +WK+APAL  GNTIV+K +E TPLT
Sbjct:    7 IDGEWISAEKEQIRSIINPFNQEEIATVSEGGREDAIKAIAAARRAFDKGEWSSLSGLERGKIVLKIAELIRRDLEELAELESLDTGKTLEES-KADMDDIANVFQYYAGLADKDGGEIISSPIPDSESKIIREPIGVCGQITPWNYPLLQASWKIAPALAAGNTIVMKPSEITPLT 182          
The following BLAST results are available for this feature:
BLAST of CV712660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
PUUC_ECOLI4.016e-3842.37Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen... [more]
BETB_BURS34.016e-3846.33Betaine aldehyde dehydrogenase OS=Burkholderia sp.... [more]
BETB_BURCJ6.850e-3845.76Betaine aldehyde dehydrogenase OS=Burkholderia cep... [more]
BETB_BURCC6.850e-3845.76Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURVG1.168e-3745.20Betaine aldehyde dehydrogenase OS=Burkholderia vie... [more]
BETB_BURCH1.993e-3745.20Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURCA1.993e-3745.20Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURM13.399e-3744.07Betaine aldehyde dehydrogenase OS=Burkholderia mul... [more]
ALDH_AGABI8.373e-3641.24Aldehyde dehydrogenase OS=Agaricus bisporus GN=ald... [more]
BETB_BACSU1.094e-3543.50Betaine aldehyde dehydrogenase OS=Bacillus subtili... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L13_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712660 ID=CV712660; Name=CV712660; organism=Citrus sinensis; type=EST; length=744bp
GTTGAATAGGTCGCTTCTTCGCTTTGGCTATGGCAGCTGCTCGCAGAATC
TCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCTTCTCCTTCTCTGCTTCG
CTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCAGGTTTAGCA
CAGCTGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAAATTAGTTAC
ACTAAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATCAGGCAAAAC
ATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTAATGTTGCTG
AAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCTCGCAAGGCA
TTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGAT
TATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGGAGCTGGCAG
CTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCTCTCAAATCT
GAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGGATGGGCTGA
TAAAATCCACGGACTAACTGTCCCTGGTGATGGAAATTACCATATTCAAA
CTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTT
CCTCTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAACTTGTGGCAA
TACTATTGTTCTAAAGTCTGCTGAGCAAACGCCTTTGACTGCTC
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