CV712660

Overview
NameCV712660
Unique NameCV712660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_XANCP (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris GN=betB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.156e-35
Identity = 80/187 (42.78%), Postives = 109/187 (58.29%), Query Frame = 3
Query:  183 PVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            P Q+ Y    I G++V A  G TF V +P T EV+ANV   DA+D+D AV +A+    +  W  +T  ERSRI+LRA  L+ +  + LA LET N GKP  ++   ++     +L YYAG A  + G+ VP        T HEP+GV G I  WN+P+ +  WK APAL  GN ++ K +E TPLTA
Sbjct:    5 PDQLLY----IGGRYVPARGGHTFEVVNPATGEVLANVHNADADDLDAAVDSAKAG--QRHWAALTVVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDIVTGADVLEYYAGVAQALQGVQVPLREGSFFYTRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_XANCB (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.156e-35
Identity = 80/187 (42.78%), Postives = 109/187 (58.29%), Query Frame = 3
Query:  183 PVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            P Q+ Y    I G++V A  G TF V +P T EV+ANV   DA+D+D AV +A+    +  W  +T  ERSRI+LRA  L+ +  + LA LET N GKP  ++   ++     +L YYAG A  + G+ VP        T HEP+GV G I  WN+P+ +  WK APAL  GN ++ K +E TPLTA
Sbjct:    5 PDQLLY----IGGRYVPARGGHTFEVVNPATGEVLANVHNADADDLDAAVDSAKAG--QRHWAALTVVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDIVTGADVLEYYAGVAQALQGVQVPLREGSFFYTRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_XANC8 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=betB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.156e-35
Identity = 80/187 (42.78%), Postives = 109/187 (58.29%), Query Frame = 3
Query:  183 PVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            P Q+ Y    I G++V A  G TF V +P T EV+ANV   DA+D+D AV +A+    +  W  +T  ERSRI+LRA  L+ +  + LA LET N GKP  ++   ++     +L YYAG A  + G+ VP        T HEP+GV G I  WN+P+ +  WK APAL  GN ++ K +E TPLTA
Sbjct:    5 PDQLLY----IGGRYVPARGGHTFEVVNPATGEVLANVHNADADDLDAAVDSAKAG--QRHWAALTVVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDIVTGADVLEYYAGVAQALQGVQVPLREGSFFYTRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH6_YEAST (Magnesium-activated aldehyde dehydrogenase, cytosolic OS=Saccharomyces cerevisiae GN=ALD6 PE=1 SV=4)

HSP 1 Score: 147.902 bits (372), Expect = 5.427e-35
Identity = 80/204 (39.22%), Postives = 120/204 (58.82%), Query Frame = 3
Query:  144 FSTAAVVEEPIIPPVQISY---TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV-PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            F TA  V+  I  P  ++Y   T   IN +F+ A  GKT+PV DP T   +  V+    ED++ A+  A +AF +  W    P ER R++ + AD +E  ++ ++++E  +NGK    + + +V + +  L   A +ADK++G T+  GDG  +  TL EPIGV GQI+PWNFP+++  WK+APAL  GN  +LK A  TPL A
Sbjct:    6 FDTAEPVK--ITLPNGLTYEQPTGLFINNKFMKAQDGKTYPVEDPSTENTVCEVSSATTEDVEYAIECADRAFHDTEWATQDPRERGRLLSKLADELESQIDLVSSIEALDNGKTLALA-RGDVTIAINCLRDAAAYADKVNGRTINTGDGYMNFTTL-EPIGVCGQIIPWNFPIMMLAWKIAPALAMGNVCILKPAAVTPLNA 205          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURPP (Betaine aldehyde dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=betB PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.258e-35
Identity = 75/177 (42.37%), Postives = 107/177 (60.45%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G +VDA SG+TF   DP T E +A+V +  A D+DRAV +A++   E  W  +T  +RSRI+ RA DL+ +  +ELAALET + GKP  ++L  ++     ++ YYAG A  I G  +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPL+A
Sbjct:   11 IGGGYVDATSGETFDTLDPATGETLASVQQASAADVDRAVRSAKQGQRE--WAALTAMQRSRILRRAVDLLRERNDELAALETRDTGKPIAETLAVDIVTGADVIEYYAGLATAIEGQQIPLRPTSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEITPLSA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.579e-34
Identity = 76/176 (43.18%), Postives = 110/176 (62.50%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 740
            ING++  +A  +T+   DP   EVIA V     ++ID AV +A++AF    W K+   E+  ++++ A+L EK+ + LAA+E  ++GKP V + + +V   + LL Y AGWADKI+G  +P            PIGV GQIVPWN+PL +  WK+APAL  GN I++KSAE TPL+
Sbjct:   25 INGEWHKSA--ETWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKT--WKKVPGSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYGQVIPTGPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLS 196          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ABDH_SERP5 (Gamma-aminobutyraldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=Spro_3642 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.062e-34
Identity = 81/181 (44.75%), Postives = 108/181 (59.67%), Query Frame = 3
Query:  210 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNY---HIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 740
            LINGQ V    G   PVY+P T EV+  VAE  AE +D+AV  A  AF+   W + TP ER+  +L+ ADLI+ + E  A LE+ N GKPY   L  E+P V  +  ++AG +  + GL     G Y   H   +  +P+GV   I PWN+PL++  WK+APAL  GN +VLK +EQTPLT
Sbjct:    6 LINGQLV-TGQGALLPVYNPATGEVVVQVAEASAEQVDQAVLAADAAFEH--WGQTTPKERAEHLLKLADLIDSHAETFARLESINCGKPYHCVLNDELPGVADVFRFFAGASRCLSGLAA---GEYLAGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEQTPLT 180          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_XANC5 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=betB PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.518e-34
Identity = 77/177 (43.50%), Postives = 103/177 (58.19%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G++V A  G TF V +P T EV+ANV    A+D+D AV +A+    +  W  +T  ERSRI+LRA  L+ +  + LA LET N GKP  ++   +V     +L YYAG A  + G  VP        T HEP+GV G I  WN+P+ +  WK APAL  GN ++ K +E TPLTA
Sbjct:   11 IGGRYVPARGGHTFEVVNPATGEVLANVHNAGADDLDAAVDSAQAG--QRQWAALTTVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDVVTGADVLEYYAGVAQALQGAQVPLREGSFFYTRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURXL (Betaine aldehyde dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=betB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.595e-34
Identity = 72/177 (40.68%), Postives = 107/177 (60.45%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G +VDA SG+TF   DP T E +A+V +  A D++RAV +AR+   E  W  +T  +RSR++ RA +++ +  +ELAALET + GKP  ++L  ++     ++ YYAG A  I G  +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPL+A
Sbjct:   11 IGGAYVDATSGETFDTLDPATGETLASVQQASAADVERAVQSAREGQRE--WAALTAMQRSRVLRRAVEILRERNDELAALETRDTGKPIAETLAVDIATGADVIEYYAGLATAIEGQQIPLRPTSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEITPLSA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURPS (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei GN=betB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.595e-34
Identity = 75/177 (42.37%), Postives = 105/177 (59.32%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPL+A
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSA 185          
The following BLAST results are available for this feature:
BLAST of CV712660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
BETB_XANCP4.156e-3542.78Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANCB4.156e-3542.78Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANC84.156e-3542.78Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
ALDH6_YEAST5.427e-3539.22Magnesium-activated aldehyde dehydrogenase, cytoso... [more]
BETB_BURPP9.258e-3542.37Betaine aldehyde dehydrogenase OS=Burkholderia phy... [more]
YLX7_SCHPO1.579e-3443.18Putative aldehyde dehydrogenase-like protein C922.... [more]
ABDH_SERP52.062e-3444.75Gamma-aminobutyraldehyde dehydrogenase OS=Serratia... [more]
BETB_XANC53.518e-3443.50Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_BURXL4.595e-3440.68Betaine aldehyde dehydrogenase OS=Burkholderia xen... [more]
BETB_BURPS4.595e-3442.37Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L13_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712660 ID=CV712660; Name=CV712660; organism=Citrus sinensis; type=EST; length=744bp
GTTGAATAGGTCGCTTCTTCGCTTTGGCTATGGCAGCTGCTCGCAGAATC
TCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCTTCTCCTTCTCTGCTTCG
CTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCAGGTTTAGCA
CAGCTGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAAATTAGTTAC
ACTAAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATCAGGCAAAAC
ATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTAATGTTGCTG
AAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCTCGCAAGGCA
TTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGAT
TATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGGAGCTGGCAG
CTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCTCTCAAATCT
GAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGGATGGGCTGA
TAAAATCCACGGACTAACTGTCCCTGGTGATGGAAATTACCATATTCAAA
CTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTT
CCTCTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAACTTGTGGCAA
TACTATTGTTCTAAAGTCTGCTGAGCAAACGCCTTTGACTGCTC
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