CV712660

Overview
NameCV712660
Unique NameCV712660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURP1 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=betB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.595e-34
Identity = 75/177 (42.37%), Postives = 105/177 (59.32%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPL+A
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURP0 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=betB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.595e-34
Identity = 75/177 (42.37%), Postives = 105/177 (59.32%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPL+A
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURMS (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain SAVP1) GN=betB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.595e-34
Identity = 75/177 (42.37%), Postives = 105/177 (59.32%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPL+A
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURMA (Betaine aldehyde dehydrogenase OS=Burkholderia mallei GN=betB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.595e-34
Identity = 75/177 (42.37%), Postives = 105/177 (59.32%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPL+A
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURM9 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10229) GN=betB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.595e-34
Identity = 75/177 (42.37%), Postives = 105/177 (59.32%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPL+A
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURM7 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10247) GN=betB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.595e-34
Identity = 75/177 (42.37%), Postives = 105/177 (59.32%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPL+A
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH_DEIRA (Aldehyde dehydrogenase OS=Deinococcus radiodurans GN=aldA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.001e-34
Identity = 74/176 (42.05%), Postives = 103/176 (58.52%), Query Frame = 3
Query:  207 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 734
            N I GQ+V    G+ F    P   +V    A   AED++ A+  A +A     W + +  ERS I+L+ AD +E+N+E LA  ETW+NGKP  ++L +++P+ +    Y+AG      G     D +      HEP+GV GQI+PWNFPLL+  WK+APAL  GN +VLK AEQTP
Sbjct:   31 NFIGGQWVPPVKGQYFDNASPVDGKVFTQAARSTAEDVELALDAAHRAAPA--WGRTSVTERSNILLKIADRMEQNLEMLAVAETWDNGKPVRETLAADLPLAIDHFRYFAGCIRAQEGGLSQIDDSTVAYHFHEPLGVVGQIIPWNFPLLMGVWKLAPALAAGNAVVLKPAEQTP 204          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: BETB_BURP6 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 668) GN=betB PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.837e-34
Identity = 75/177 (42.37%), Postives = 104/177 (58.76%), Query Frame = 3
Query:  213 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +    LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPL+A
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNNALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSA 185          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ABDH_ECOLU (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.024e-33
Identity = 77/181 (42.54%), Postives = 109/181 (60.22%), Query Frame = 3
Query:  204 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            K LING+ V +  G+  PVY+P T EV+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL  GN +VLK +E TPLTA
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGEVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 181          
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH_VIBCH (Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.280e-33
Identity = 74/178 (41.57%), Postives = 103/178 (57.87%), Query Frame = 3
Query:  207 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 740
            N I GQ++   SG+ F    P    V   VA   ++D++ A+  A  A +   W   +  ERS I+LR AD IE N+E LA +E+W+NGKP  ++L +++P+ +    Y+A       G     D       L EPIGV GQI+PWNFPLL+  WK+APAL  G T+VLK AEQTP++
Sbjct:   21 NYIGGQWMKPHSGEYFSNTSPVNGLVFCRVARSSSQDVELALDAAHNALES--WSTTSAVERSNILLRIADRIESNLETLAIVESWDNGKPIRETLAADLPLTIDHFRYFAACIRSQEGAASELDSRTLTYHLPEPIGVVGQIIPWNFPLLMAAWKLAPALAAGCTVVLKPAEQTPVS 196          
The following BLAST results are available for this feature:
BLAST of CV712660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
BETB_BURP14.595e-3442.37Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP04.595e-3442.37Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURMS4.595e-3442.37Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURMA4.595e-3442.37Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURM94.595e-3442.37Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURM74.595e-3442.37Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
ALDH_DEIRA6.001e-3442.05Aldehyde dehydrogenase OS=Deinococcus radiodurans ... [more]
BETB_BURP67.837e-3442.37Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
ABDH_ECOLU1.024e-3342.54Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ALDH_VIBCH2.280e-3341.57Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_0001L13_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712660 ID=CV712660; Name=CV712660; organism=Citrus sinensis; type=EST; length=744bp
GTTGAATAGGTCGCTTCTTCGCTTTGGCTATGGCAGCTGCTCGCAGAATC
TCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCTTCTCCTTCTCTGCTTCG
CTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCAGGTTTAGCA
CAGCTGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAAATTAGTTAC
ACTAAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATCAGGCAAAAC
ATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTAATGTTGCTG
AAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCTCGCAAGGCA
TTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGAT
TATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGGAGCTGGCAG
CTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCTCTCAAATCT
GAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGGATGGGCTGA
TAAAATCCACGGACTAACTGTCCCTGGTGATGGAAATTACCATATTCAAA
CTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTT
CCTCTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAACTTGTGGCAA
TACTATTGTTCTAAAGTCTGCTGAGCAAACGCCTTTGACTGCTC
back to top