CV712660

Overview
NameCV712660
Unique NameCV712660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ALDH_VIBC3 (Aldehyde dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=aldA PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.280e-33
Identity = 74/178 (41.57%), Postives = 103/178 (57.87%), Query Frame = 3 
Query:  207 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 740
            N I GQ++   SG+ F    P    V   VA   ++D++ A+  A  A +   W   +  ERS I+LR AD IE N+E LA +E+W+NGKP  ++L +++P+ +    Y+A       G     D       L EPIGV GQI+PWNFPLL+  WK+APAL  G T+VLK AEQTP++
Sbjct:   21 NYIGGQWMKPHSGEYFSNTSPVNGLVFCRVARSSSQDVELALDAAHNALES--WSTTSAVERSNILLRIADRIESNLETLAIVESWDNGKPIRETLAADLPLTIDHFRYFAACIRSQEGAASELDSRTLTYHLPEPIGVVGQIIPWNFPLLMAAWKLAPALAAGCTVVLKPAEQTPVS 196
[Close]
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ABDH_ESCF3 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ydcW PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.280e-33
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 3 
Query:  204 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL  GN +VLK +E TPLTA
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 181
[Close]
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ABDH_ECOSM (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.280e-33
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 3 
Query:  204 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL  GN +VLK +E TPLTA
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 181
[Close]
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ABDH_SHISS (Gamma-aminobutyraldehyde dehydrogenase OS=Shigella sonnei (strain Ss046) GN=ydcW PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.978e-33
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 3 
Query:  204 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL  GN +VLK +E TPLTA
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 181
[Close]
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ABDH_ECOSE (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain SE11) GN=ydcW PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.978e-33
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 3 
Query:  204 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL  GN +VLK +E TPLTA
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 181
[Close]
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ABDH_ECOLI (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=ydcW PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.978e-33
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 3 
Query:  204 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL  GN +VLK +E TPLTA
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 181
[Close]
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ABDH_ECOLC (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ydcW PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.978e-33
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 3 
Query:  204 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL  GN +VLK +E TPLTA
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 181
[Close]
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ABDH_ECOHS (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=ydcW PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.978e-33
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 3 
Query:  204 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL  GN +VLK +E TPLTA
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 181
[Close]
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ABDH_ECODH (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=ydcW PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.978e-33
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 3 
Query:  204 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL  GN +VLK +E TPLTA
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 181
[Close]
BLAST of CV712660 vs. ExPASy Swiss-Prot
Match: ABDH_ECOBW (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12 / BW2952) GN=ydcW PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.978e-33
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 3 
Query:  204 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 743
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL  GN +VLK +E TPLTA
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 181
The following BLAST results are available for this feature:
BLAST of CV712660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
ALDH_VIBC32.280e-3341.57Aldehyde dehydrogenase OS=Vibrio cholerae serotype... [more]
ABDH_ESCF32.280e-3341.99Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOSM2.280e-3341.99Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_SHISS2.978e-3341.99Gamma-aminobutyraldehyde dehydrogenase OS=Shigella... [more]
ABDH_ECOSE2.978e-3341.99Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOLI2.978e-3341.99Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOLC2.978e-3341.99Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOHS2.978e-3341.99Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECODH2.978e-3341.99Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOBW2.978e-3341.99Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L13_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712660 ID=CV712660; Name=CV712660; organism=Citrus sinensis; type=EST; length=744bp
GTTGAATAGGTCGCTTCTTCGCTTTGGCTATGGCAGCTGCTCGCAGAATC
TCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCTTCTCCTTCTCTGCTTCG
CTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCAGGTTTAGCA
CAGCTGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAAATTAGTTAC
ACTAAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATCAGGCAAAAC
ATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTAATGTTGCTG
AAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCTCGCAAGGCA
TTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGAT
TATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGGAGCTGGCAG
CTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCTCTCAAATCT
GAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGGATGGGCTGA
TAAAATCCACGGACTAACTGTCCCTGGTGATGGAAATTACCATATTCAAA
CTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTT
CCTCTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAACTTGTGGCAA
TACTATTGTTCTAAAGTCTGCTGAGCAAACGCCTTTGACTGCTC
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