CV712659

Overview
NameCV712659
Unique NameCV712659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: AL1B1_HUMAN (Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1 PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.908e-57
Identity = 107/198 (54.04%), Postives = 142/198 (71.72%), Query Frame = -3
Query:  201 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV--QPVKN 788
            CCAGSRT+V E +Y+EF+E+   +A +R VG+PF+   +QGPQ+D EQFE+VL YI+ G +  A L CGG+R G RG+F++PTVF  V+DDM IA++EIFGPVQ + KFK+ ++V+ RAN TR+GLAA VFT+  D A    +AL+AGTVW+N Y++     PFGG+K SG GRE G   L AY +VK V    P KN
Sbjct:  319 CCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLLCGGERFGERGFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFKKIEEVVERANNTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKTVTIKVPQKN 516          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: AL1A3_MOUSE (Aldehyde dehydrogenase family 1 member A3 OS=Mus musculus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.255e-57
Identity = 111/199 (55.78%), Postives = 141/199 (70.85%), Query Frame = -3
Query:  198 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV--KNP 788
            C A SR +V E+VY EFV ++   A +R VGDPF +  EQGPQID +QF+K+L  I SG +  A LECGG  + +RG F++PTVFSDV D+M IA++EIFGPVQ ILKFK  ++VI+RAN T +GL A VFTK+ D A  +  AL +GTVWINCY+ F A  PFGG+K+SG GRE G Y+L  Y +VK V   +  KNP
Sbjct:  314 CTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDRGLFIKPTVFSDVTDNMRIAKEEIFGPVQPILKFKNLEEVIKRANSTDYGLTAAVFTKNLDKALKLAAALESGTVWINCYNAFYAQAPFGGFKMSGNGRELGEYALAEYTEVKTVTIKLEEKNP 512          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 4.251e-57
Identity = 102/200 (51.00%), Postives = 139/200 (69.50%), Query Frame = -3
Query:  189 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPVKNPAWL 788
            C A SR +V E +YD+ VEK   +A    VGDPF S   QGPQ+D  QFEK+L YI  G    ATL  GG  +G++GYF+QPT+F+DV +DM I QDEIFGPV S++KFK  ++ I+ AN T++GLAAG+ ++  D  NT+ R+++AG +W+NCY  FD   P+GGYK+SG  RE G+ +L+ YLQ K+VV P+ N  W+
Sbjct:  302 CVASSRVFVQEGIYDKVVEKLVEKAKDWTVGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATLLTGGKAIGDKGYFIQPTIFADVTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRSIKAGIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKSVVMPLHNSPWM 501          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: AL1A3_RAT (Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.251e-57
Identity = 110/199 (55.28%), Postives = 141/199 (70.85%), Query Frame = -3
Query:  198 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV--KNP 788
            C A SR +V E+VY EFV ++   A +R VGDPF +  EQGPQID +QF+K+L  I SG +  A LECGG  + +RG F++PTVFSDV D+M IA++EIFGPVQ ILKFK  ++VI+RAN T +GL A VFTK+ D A  +  AL +GTVW+NCY+ F A  PFGG+K+SG GRE G Y+L  Y +VK V   +  KNP
Sbjct:  314 CTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDRGLFIKPTVFSDVTDNMRIAKEEIFGPVQPILKFKNLEEVIKRANSTDYGLTAAVFTKNLDKALKLASALESGTVWVNCYNAFYAQAPFGGFKMSGNGRELGEYALAEYTEVKTVTIKLDEKNP 512          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: AL1A2_TAEGU (Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=ALDH1A2 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.599e-56
Identity = 109/190 (57.37%), Postives = 134/190 (70.53%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C AGSR YV E +Y+EFV K+  RA R+IVG PF    EQGPQID +Q+ K+L  I+SGI   A LECGG  LG +G+F++PTVFS+V DDM IA++EIFGPVQ IL+FK  D+VI RAN + FGL A VFT   + A T+  A++AGTVWINCY+  +A  PFGG K SG GRE G   L  Y +VK V
Sbjct:  320 CTAGSRIYVEESIYEEFVRKSVKRAKRKIVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGSK-SGNGREMGECGLREYSEVKTV 508          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.139e-56
Identity = 103/194 (53.09%), Postives = 134/194 (69.07%), Query Frame = -3
Query:  207 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 788
            C A S+ +V E +YDEFV+++  RA + + G+P   GV  GPQI+  Q  K++  I SG +  A LECGG   GN+GYF+QPTVFS+V DDM IA++EIFGPVQ I+KFK  D+VI+RAN T +GL AGVFTK  D A T+  AL+AGTVW+NCY    A  P GG+K+SG GRE G Y ++ Y +VK V   +
Sbjct:  303 CIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTVTMKI 496          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.017e-56
Identity = 102/194 (52.58%), Postives = 134/194 (69.07%), Query Frame = -3
Query:  207 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 788
            C A S+ +V E +YDEFV+++  RA + + G+P   GV  GPQI+  Q  K++  I SG +  A LECGG   GN+GYF+QPT+FS+V DDM IA++EIFGPVQ I+KFK  D+VI+RAN T +GL AGVFTK  D A T+  AL+AGTVW+NCY    A  P GG+K+SG GRE G Y ++ Y +VK V   +
Sbjct:  303 CIAASKLFVEETIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTIFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTVTMKI 496          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.368e-55
Identity = 108/199 (54.27%), Postives = 139/199 (69.85%), Query Frame = -3
Query:  198 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV--KNP 788
            C A SR +V E+VY EFV ++   A +R VGDPF    EQGPQID +QF+K+L  I SG +  A LECGG  + ++G F++PTVFS+V D+M IA++EIFGPVQ ILKFK  ++VI+RAN T +GL A VFTK+ D A  +  AL +GTVWINCY+   A  PFGG+K+SG GRE G Y+L  Y +VK V   +  KNP
Sbjct:  314 CTAASRVFVEEQVYSEFVRRSVEYAKKRPVGDPFDVKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDKGLFIKPTVFSEVTDNMRIAKEEIFGPVQPILKFKSIEEVIKRANSTDYGLTAAVFTKNLDKALKLASALESGTVWINCYNALYAQAPFGGFKMSGNGRELGEYALAEYTEVKTVTIKLGDKNP 512          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: ALDH_ASPNG (Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.787e-55
Identity = 99/190 (52.11%), Postives = 133/190 (70.00%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            CCAGSR  V E +YD+F+ + K RA++  VGDPF     QGPQ+   QF++++ YI+ G ++ AT+  GG+R G  GYF+QPTVF+DV  DM I Q+EIFGPV ++ KFK+ +D I+  N T +GLAAG+ TK   TA  +  ALRAGTVW+N Y++    +PFGG+K SGIGRE G Y+L  Y Q+KAV
Sbjct:  299 CCAGSRILVQEGIYDKFIARLKERALQNKVGDPFAKDTFQGPQVSQLQFDRIMEYIQHGKDAGATVAVGGERHGTEGYFIQPTVFTDVTSDMKINQEEIFGPVVTVQKFKDVEDAIKIGNSTSYGLAAGIHTKDVTTAIRVSNALRAGTVWVNSYNLIQYQVPFGGFKESGIGRELGSYALENYTQIKAV 488          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: YF19_SCHPO (Putative aldehyde dehydrogenase-like protein C9E9.09c OS=Schizosaccharomyces pombe GN=SPAC9E9.09c PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.512e-54
Identity = 101/190 (53.16%), Postives = 130/190 (68.42%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            CCAGSR YV E VYDEF+++  A+A    VGDPF     QG Q+  +Q+E+++ YI SGI   A LE GG R GN GYFV+PT+ S+V +DM + ++EIFGPV +++KFK  ++ IRR N + +GLAAGV T +   A  +  AL AGTVW+NCY++    IPFGGYK SGIGRE G Y L  Y Q KAV
Sbjct:  304 CCAGSRVYVQEDVYDEFIKRMVAKAKTLKVGDPFAEDTFQGAQVSKQQYERIVSYIESGIAHGAKLEIGGKRHGNLGYFVEPTILSNVTEDMAVGKEEIFGPVLAVIKFKTIEEAIRRGNNSTYGLAAGVHTNNITNAIKVSNALEAGTVWVNCYNLLHHQIPFGGYKESGIGRELGSYGLTNYTQTKAV 493          
The following BLAST results are available for this feature:
BLAST of CV712659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
AL1B1_HUMAN1.908e-5754.04Aldehyde dehydrogenase X, mitochondrial OS=Homo sa... [more]
AL1A3_MOUSE3.255e-5755.78Aldehyde dehydrogenase family 1 member A3 OS=Mus m... [more]
AL2C4_ARATH4.251e-5751.00Aldehyde dehydrogenase family 2 member C4 OS=Arabi... [more]
AL1A3_RAT4.251e-5755.28Aldehyde dehydrogenase family 1 member A3 OS=Rattu... [more]
AL1A2_TAEGU3.599e-5657.37Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=... [more]
ALDH1_ELEED6.139e-5653.09Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]
ALDH1_MACPR8.017e-5652.58Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelid... [more]
AL1A3_HUMAN1.368e-5554.27Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
ALDH_ASPNG6.787e-5552.11Aldehyde dehydrogenase OS=Aspergillus niger GN=ald... [more]
YF19_SCHPO1.512e-5453.16Putative aldehyde dehydrogenase-like protein C9E9.... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L13_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712659 ID=CV712659; Name=CV712659; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTCAGTGAAAGCTGCCTTGATCAACAGACATGCAT
CATTGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATC
CATTTGCTCCATAATTACAAGCTGATATTTGCACGCTGTCCTTATTCATA
AACACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAGAGCCATGCTGG
GTTCTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGC
TGTAAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAA
GGAATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGC
TCTCAGTGCACGCATCATGGTGTTAGCAGTGTCTGCACTCTTGGTGAAAA
CCCCAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCA
TCAGTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATC
CTGTGCTATCAACATGTCATCCTTAACATCTGAGAAGACAGTTGGCTGAA
CAAAGTAGCCTCTGTTGCCCAATCTATCACCTCCACACTCAAGGGTTGCA
TTGCTTTCAATTCCAGACCTTATGTACCTAAGGACCTTCTCAAATTGCTC
TGGATCAATCTGAGGACCTTGTTCAACACCACTCTTGAAGGGATCGCCAA
CAATACGCCTCATAGCACGTGCCTTTGCTTTTTCTACAAACTCGTCATAT
ACACGCTCATGTACATAAGTACGAGATCCAGCACAGCAAC
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