CV712659

Overview
NameCV712659
Unique NameCV712659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 1.975e-54
Identity = 99/190 (52.11%), Postives = 136/190 (71.58%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            CCAGSR YV E +YD+FV+K K RA + +VGDPF +   QGPQ+   QF++++ YI++G ++ AT+E GG R G++GYF++PT+FS+V +DM I ++EIFGPV SI KFK  +D I+  N + +GLAA V TK+ +TA  +  AL+AGTVW+N Y+     +PFGGYK SGIGRE G  +L  Y Q K V
Sbjct:  297 CCAGSRVYVQESIYDKFVQKFKERAQKNVVGDPFAADTFQGPQVSKVQFDRIMEYIQAGKDAGATVETGGKRKGDKGYFIEPTIFSNVTEDMKIVKEEIFGPVCSIAKFKTKEDAIKLGNASTYGLAAAVHTKNLNTAIEVSNALKAGTVWVNTYNTLHHQMPFGGYKESGIGRELGEDALANYTQTKTV 486          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: CROM_OMMSL (Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 2.579e-54
Identity = 99/196 (50.51%), Postives = 139/196 (70.92%), Query Frame = -3
Query:  201 AGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQ--PVKN 782
            +GSRTYVHE +YDEFV++A  +A  R  GDP++   E GPQID EQ++K++ +I+ G +  A L+CGG+R G++G++V+PTVFSDV D+M  +Q+EIFGPVQ I+KFK+ D+VI R N T +G+AA +FT   + + T   A+  GTVW+N Y+ +    PFGGYK SG+ RE G Y+L  Y +VK +V   P KN
Sbjct:  299 SGSRTYVHENIYDEFVKRAVEKATSRKTGDPYEMDTEHGPQIDEEQYKKIMEFIKKGKDKGAQLKCGGNRHGDKGFYVEPTVFSDVTDEMKFSQEEIFGPVQLIMKFKDMDEVIDRCNNTDYGMAAAIFTNDINRSITFTHAMYCGTVWVNTYNHWFPQAPFGGYKKSGLYREMGKYTLQEYTEVKNIVYRIPQKN 494          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: ALDH_ALTAL (Aldehyde dehydrogenase OS=Alternaria alternata GN=ALTA10 PE=1 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 5.746e-54
Identity = 100/190 (52.63%), Postives = 134/190 (70.53%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            CCAGSR YV E +YD+F+++ K RA +  VGDPF +   QGPQ+   QF++++ YI  G +S AT+E GG+R G++GYF++PT+FS+V +DM I Q+EIFGPV +I KFK   DVI+  N T +GLAA V T +  TA  +  ALRAGTVW+N Y+     +PFGGYK SGIGRE G  +L+ Y+Q K V
Sbjct:  298 CCAGSRIYVQEEIYDKFIQRFKERAAQNAVGDPFAADTFQGPQVSQLQFDRIMGYIEEGKKSGATIETGGNRKGDKGYFIEPTIFSNVTEDMKIQQEEIFGPVCTISKFKTKADVIKIGNNTTYGLAAAVHTSNLTTAIEVANALRAGTVWVNSYNTLHWQLPFGGYKESGIGRELGEAALDNYIQTKTV 487          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 2.852e-53
Identity = 100/190 (52.63%), Postives = 132/190 (69.47%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            CCAGSR  V E +YD+FV + K RA +  VG+PF+    QGPQ+   QF++++ YI  G ++ AT+  GGDR GN GYF+QPTVF+DV  DM IAQ+EIFGPV +I KFK+  + I+  N T +GLAA V TK+ +TA  +  AL+AGTVWIN Y++     PFGG+K SG+GRE G Y+L  Y Q+K V
Sbjct:  298 CCAGSRILVQEGIYDKFVARFKERAQKNKVGNPFEQDTFQGPQVSQLQFDRIMEYINHGKKAGATVATGGDRHGNEGYFIQPTVFTDVTSDMKIAQEEIFGPVVTIQKFKDEAEAIKIGNSTDYGLAAAVHTKNVNTAIRVSNALKAGTVWINNYNMISYQAPFGGFKQSGLGRELGSYALENYTQIKTV 487          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: ALDH_AGABI (Aldehyde dehydrogenase OS=Agaricus bisporus GN=aldA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.848e-52
Identity = 92/190 (48.42%), Postives = 133/190 (70.00%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            CCAG+R +V E +YD+F++K   +     +GDPF  G++QGPQ+   Q+++++ YI SG    AT+  GG+R GN GYF+QPT+F+D   DM I ++EIFGPV +++KFK+  +VI++AN + +GLAA VF++  + A     A +AGT W+NC +  DA +PFGGYK SGIGRE G Y+L+ Y  VKAV
Sbjct:  303 CCAGTRIFVQEGIYDKFLQKFTDKIKEIKLGDPFGLGIDQGPQVSQIQYDRIMSYIESGRAEGATVHVGGERHGNEGYFIQPTIFTDTTPDMKIVKEEIFGPVGAVIKFKDGKEVIKQANDSNYGLAAAVFSQDINKAIETAHAFKAGTAWVNCANTIDAGVPFGGYKQSGIGRELGEYALHNYTNVKAV 492          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: ALDH4_YEAST (Potassium-activated aldehyde dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=ALD4 PE=1 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 3.153e-52
Identity = 98/190 (51.58%), Postives = 130/190 (68.42%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            CCAGSR YV E +YD+F+E+ KA +    VGDPF     QG Q    Q  K+L+Y+  G    ATL  GG+RLG++GYF++PTVF DVK+DM I ++EIFGPV ++ KFK  D+VI  AN + +GLAAG+ T + +TA  +   + AGTVWIN Y+ F  A+PFGG+  SG+GRE  + +L  YLQVKAV
Sbjct:  324 CCAGSRVYVEESIYDKFIEEFKAASESIKVGDPFDESTFQGAQTSQMQLNKILKYVDIGKNEGATLITGGERLGSKGYFIKPTVFGDVKEDMRIVKEEIFGPVVTVTKFKSADEVINMANDSEYGLAAGIHTSNINTALKVADRVNAGTVWINTYNDFHHAVPFGGFNASGLGREMSVDALQNYLQVKAV 513          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: CROM_ENTDO (Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=3)

HSP 1 Score: 198.749 bits (504), Expect = 2.951e-50
Identity = 92/190 (48.42%), Postives = 135/190 (71.05%), Query Frame = -3
Query:  216 AGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRG-YFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV 782
            +GSR YVHE +Y+EFV+++  +A RR +GDP++   E GPQID EQ+ KVL YI+S  E  A L+ GG++ G++G Y+++PTVFS+V D+M IA++EIFGPVQ ++KF++ DDVI R N + +G+AA +FT   +   T   A+  GT+W+N +  +    PFGG+K SGI RE G Y+L  Y +VK+V+
Sbjct:  299 SGSRAYVHESIYEEFVKRSVEQATRRKIGDPYELDTEHGPQIDEEQYTKVLDYIKSAQEQGAKLKYGGNKHGDKGGYYIEPTVFSEVSDNMKIAKEEIFGPVQLLMKFRDLDDVIDRCNNSDYGMAAAIFTNDINRIMTFTNAVNTGTIWVNTFHHWFPQAPFGGFKTSGISREMGKYALREYTEVKSVI 488          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: AL1B1_BOVIN (Aldehyde dehydrogenase X, mitochondrial (Fragment) OS=Bos taurus GN=ALDH1B1 PE=2 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.951e-50
Identity = 97/198 (48.99%), Postives = 133/198 (67.17%), Query Frame = -3
Query:  201 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV--QPVKN 788
            CC GS T++ E +YDEF+E+   +A +R VG+PF    +QGPQ+D E+FE++L YI+ G +  A L CGG+    + +F++PTVF  V+DDM IA++EIFGPVQ + KFK+ ++VI RA+ TR+GLAA VFT+  D A    +AL+ GTVW+N Y+V     P GG+K  G GRE G   L AY +VK V    P KN
Sbjct:  313 CCPGSWTFIEESIYDEFLERTVEKAKQRRVGNPFDLDTQQGPQVDRERFERILGYIQLGQKEGAKLLCGGEHFRQQCFFIKPTVFGGVQDDMRIAREEIFGPVQPLFKFKKIEEVIERADNTRYGLAAAVFTQDLDKAMYFTQALQTGTVWVNTYNVVTCHTPLGGFKEPGNGRELGEDGLKAYTEVKTVTIKVPQKN 510          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: ALDH2_LEITA (Aldehyde dehydrogenase, mitochondrial OS=Leishmania tarentolae GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.033e-50
Identity = 94/190 (49.47%), Postives = 133/190 (70.00%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C A SR YVHE VYDEFV + +  A  R VG    +G   GP +  +Q E+VL YI  G+++ AT+  GG ++G++GYFVQPT+FSDVK+DM I ++EIFGPV  ++K+K+ D+V++RAN + +GLAAG+ T+S DTA      L AGTVW+N ++ F  ++PFGG+K SGIGRE G   ++ Y + KA+
Sbjct:  299 CTASSRIYVHESVYDEFVSRLRKNAEARKVGPGNDTGNNMGPLVSKKQHERVLGYIEDGVKAGATVVTGGKKIGDKGYFVQPTIFSDVKEDMRICKEEIFGPVTCVMKYKDMDEVVKRANDSIYGLAAGICTRSMDTALRYSTYLNAGTVWVNTWNNFCPSMPFGGFKQSGIGRELGKEVVDMYTEPKAI 488          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_OCHA4 (Betaine aldehyde dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=betB PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47
Identity = 91/194 (46.91%), Postives = 126/194 (64.95%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +VH+ + + FVE+   R  +  +GDP     + GP ++  Q +KVL YI  G    ATL CGG     +  ++GYF++PT+F+DV DDM IA++EIFGPV S+L+F + D+VI RAN T FGLAAGVFT      + ++  ++AGT WIN Y++    +PFGGYK SGIGRE GI +L  Y Q+K V
Sbjct:  283 CSNGTRVFVHKNLRERFVERLVERTRKIRIGDPLDEATQMGPLVNRAQRDKVLSYIEKGKAEGATLACGGGVPKLQGFDKGYFIEPTIFTDVTDDMTIAREEIFGPVMSVLEFSDEDEVIARANDTEFGLAAGVFTADIARGHRVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
The following BLAST results are available for this feature:
BLAST of CV712659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
ALDH_CLAHE1.975e-5452.11Aldehyde dehydrogenase OS=Cladosporium herbarum GN... [more]
CROM_OMMSL2.579e-5450.51Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3[more]
ALDH_ALTAL5.746e-5452.63Aldehyde dehydrogenase OS=Alternaria alternata GN=... [more]
ALDH_EMENI2.852e-5352.63Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]
ALDH_AGABI1.848e-5248.42Aldehyde dehydrogenase OS=Agaricus bisporus GN=ald... [more]
ALDH4_YEAST3.153e-5251.58Potassium-activated aldehyde dehydrogenase, mitoch... [more]
CROM_ENTDO2.951e-5048.42Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=... [more]
AL1B1_BOVIN2.951e-5048.99Aldehyde dehydrogenase X, mitochondrial (Fragment)... [more]
ALDH2_LEITA5.033e-5049.47Aldehyde dehydrogenase, mitochondrial OS=Leishmani... [more]
BETB_OCHA46.803e-4746.91Betaine aldehyde dehydrogenase OS=Ochrobactrum ant... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_0001L13_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712659 ID=CV712659; Name=CV712659; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTCAGTGAAAGCTGCCTTGATCAACAGACATGCAT
CATTGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATC
CATTTGCTCCATAATTACAAGCTGATATTTGCACGCTGTCCTTATTCATA
AACACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAGAGCCATGCTGG
GTTCTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGC
TGTAAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAA
GGAATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGC
TCTCAGTGCACGCATCATGGTGTTAGCAGTGTCTGCACTCTTGGTGAAAA
CCCCAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCA
TCAGTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATC
CTGTGCTATCAACATGTCATCCTTAACATCTGAGAAGACAGTTGGCTGAA
CAAAGTAGCCTCTGTTGCCCAATCTATCACCTCCACACTCAAGGGTTGCA
TTGCTTTCAATTCCAGACCTTATGTACCTAAGGACCTTCTCAAATTGCTC
TGGATCAATCTGAGGACCTTGTTCAACACCACTCTTGAAGGGATCGCCAA
CAATACGCCTCATAGCACGTGCCTTTGCTTTTTCTACAAACTCGTCATAT
ACACGCTCATGTACATAAGTACGAGATCCAGCACAGCAAC
back to top