CV712659

Overview
NameCV712659
Unique NameCV712659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAS7 (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) GN=ALD5 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.733e-45
Identity = 89/197 (45.18%), Postives = 125/197 (63.45%), Query Frame = -3
Query:  198 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPVKNP 788
            CCAGSR Y+ + VY+E ++K K       VGDPF   V QG Q   +Q  K+L Y+       A L  GG R G++GYFV+PTVF+DVK+DM I ++E+FGP+ ++ KF   D+VI  AN +++GLAAG+ T   + A  + + ++AGTVWIN Y+ F   +PFGG+  SGIGRE G  +L+ Y Q K+V   +  P
Sbjct:  322 CCAGSRIYIQDTVYEEVLQKLKDYTESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHGSKGYFVKPTVFADVKEDMRIVKEEVFGPIVTVSKFSTVDEVIAMANDSQYGLAAGIHTNDINKAVDVSKRVKAGTVWINTYNNFHQNVPFGGFGQSGIGREMGEAALSNYTQTKSVRIAIDKP 518          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAST (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae GN=ALD5 PE=1 SV=3)

HSP 1 Score: 180.644 bits (457), Expect = 8.316e-45
Identity = 89/197 (45.18%), Postives = 124/197 (62.94%), Query Frame = -3
Query:  198 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPVKNP 788
            CCAGSR Y+ + VY+E ++K K       VGDPF   V QG Q   +Q  K+L Y+       A L  GG R G++GYFV+PTVF+DVK DM I ++E+FGP+ ++ KF   D+VI  AN +++GLAAG+ T   + A  + + ++AGTVWIN Y+ F   +PFGG+  SGIGRE G  +L+ Y Q K+V   +  P
Sbjct:  322 CCAGSRIYIQDTVYEEVLQKLKDYTESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHGSKGYFVKPTVFADVKGDMRIVKEEVFGPIVTVSKFSTVDEVIAMANDSQYGLAAGIHTNDINKAVDVSKRVKAGTVWINTYNNFHQNVPFGGFGQSGIGREMGEAALSNYTQTKSVRIAIDKP 518          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_RHILW (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=betB PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.675e-43
Identity = 89/203 (43.84%), Postives = 125/203 (61.58%), Query Frame = -3
Query:  198 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV---VQPVKNP 788
            C  G+R +V + +  EF+++ KAR    ++GDP     + GP +   Q EKV+ YI  G    ATL  GG   + +   GY++QPTVF+DV DDM IA++EIFGPV S+L F + D+VI RAN + FGL+ GVFT     A+ ++  L AGT+WIN Y++    IPFGG K SG GRE  + +L  Y ++K V   + PV+ P
Sbjct:  284 CSNGTRVFVQKGIKTEFLKRLKARTEAMLIGDPLDEATQIGPMVSWAQREKVVAYIEKGKAEGATLVAGGGIPNNVSGEGYYIQPTVFADVTDDMTIAREEIFGPVMSVLDFDDEDEVIARANASEFGLSGGVFTADLSRAHRVVDRLEAGTLWINAYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVGMGPVQAP 486          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_RHIEC (Betaine aldehyde dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=betB PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.675e-43
Identity = 88/193 (45.60%), Postives = 120/193 (62.18%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +V + V  EF+++ KAR    ++GDP     + GP +   Q EKV+ YI  G    ATL  GG   + +   GY+VQPTVF+DV DDM IA++EIFGPV S+L F + D+VI RAN + FGL+ GVFT     A+ ++  L AGT+WIN Y++    IPFGG K SG GRE  + +L  Y ++K V
Sbjct:  284 CSNGTRVFVQKAVKAEFLKRLKARTEAMLIGDPLDEATQIGPMVSWAQREKVIAYIEKGKAEGATLVAGGGIPNNVSGEGYYVQPTVFADVTDDMTIAREEIFGPVMSVLDFDDEDEVITRANASEFGLSGGVFTADLSRAHRVVDRLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSLAALEHYSELKTV 476          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_AGRRK (Betaine aldehyde dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=betB PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.563e-43
Identity = 90/203 (44.33%), Postives = 124/203 (61.08%), Query Frame = -3
Query:  198 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV---VQPVKNP 788
            C  G+R +V+ ++  EF+++ KAR    ++GDP     + GP +   Q EKVL YI  G    ATL  GG   + +   GY+VQPTVF+DV DDM IA++EIFGPV  +L F +  +VI RAN T FGL+ GVFT     A+ ++  L AGT+WIN Y++    IPFGG K SG GRE  + +L  Y ++K V   + PV+ P
Sbjct:  284 CSNGTRVFVNRKIKAEFLKRLKARTEAMLIGDPMDEATQVGPMVSWAQREKVLSYIEKGKAEGATLVAGGGIPNNVSGEGYYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEAEVIARANDTEFGLSGGVFTADLTRAHRVVDQLEAGTLWINAYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVGMGPVQAP 486          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_RHIE6 (Betaine aldehyde dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betB PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.783e-43
Identity = 89/203 (43.84%), Postives = 125/203 (61.58%), Query Frame = -3
Query:  198 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV---VQPVKNP 788
            C  G+R +V + +  EF+++ KAR    ++GDP     + GP +   Q EKV+ YI  G    ATL  GG   + +   GY+VQPTVF+DV D+M IA++EIFGPV S+L F + D+VI RAN + FGL+ GVFT     A+ ++  L AGT+WIN Y++    IPFGG K SG GRE  + +L  Y ++K V   + PV+ P
Sbjct:  284 CSNGTRVFVQKGIKTEFLKRLKARTEAMLIGDPMDEATQIGPMVSWAQREKVVAYIEKGKAEGATLVAGGGIPNNVSGEGYYVQPTVFADVTDEMTIAREEIFGPVMSVLDFDDEDEVITRANASEFGLSGGVFTADLTRAHRVVDRLEAGTLWINAYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVGMGPVQAP 486          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: ALDH6_YEAST (Magnesium-activated aldehyde dehydrogenase, cytosolic OS=Saccharomyces cerevisiae GN=ALD6 PE=1 SV=4)

HSP 1 Score: 173.711 bits (439), Expect = 1.017e-42
Identity = 86/191 (45.03%), Postives = 124/191 (64.92%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C +GSR YV E +YDE +   KA     I VG+PF     QG   + +QF+ ++ YI  G +  A +  GG+++G++GYF++PTVF DV +DM I ++EIFGPV ++ KFK  ++ +  AN + FGL +G+ T+S  T   + + L+AGTVWIN Y+ FD+ +PFGG K SG GRE G    +AY +VKAV
Sbjct:  306 CSSGSRIYVQEGIYDELLAAFKAYLETEIKVGNPFDKANFQGAITNRQQFDTIMNYIDIGKKEGAKILTGGEKVGDKGYFIRPTVFYDVNEDMRIVKEEIFGPVVTVAKFKTLEEGVEMANSSEFGLGSGIETESLSTGLKVAKMLKAGTVWINTYNDFDSRVPFGGVKQSGYGREMGEEVYHAYTEVKAV 496          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_RHILO (Betaine aldehyde dehydrogenase OS=Rhizobium loti GN=betB PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.328e-42
Identity = 88/194 (45.36%), Postives = 122/194 (62.89%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +V   ++D FVE+   R  +  +G+P     + GP +   Q EKV+ YI  G +  A L CGG+       + G+FV+PTVF+ V D M IA++EIFGPV S+LKF   D+VI RAN T FGLAAGVFT+    A+ ++  L+AGT WIN Y++    IPFGG+K SGIGRE  + +L  Y Q+K++
Sbjct:  283 CSNGTRVFVQSGIHDRFVERLVERTKKIRIGNPLDPETQMGPLVSKAQHEKVVGYIGIGKQDGAVLACGGNVPSLQGFDGGFFVEPTVFTGVTDTMRIAREEIFGPVMSVLKFDGEDEVIDRANDTEFGLAAGVFTRDLPRAHRVIAELQAGTCWINAYNLTPVEIPFGGFKQSGIGRENSLAALALYSQLKSI 476          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_RHIL3 (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=betB PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.328e-42
Identity = 86/193 (44.56%), Postives = 118/193 (61.14%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +V + + DEF+++ K R    ++GDP     + GP +   Q EKV+ YI  G    ATL  GG   + +   GY+VQPTVF+DV DDM IA++EIFGPV  +L F   D+VI RAN + FGL+ GVFT     A+ ++  L AGT+WIN Y++    IPFGG K SG GRE  + +L  Y ++K V
Sbjct:  284 CSNGTRVFVQKTIKDEFLKRLKVRTEAMLIGDPMDEATQVGPMVSWAQREKVISYIEKGKAEGATLIAGGGIPNNVSGEGYYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDAEDEVIARANASEFGLSGGVFTADLTRAHRVVDRLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSLAALEHYSELKTV 476          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_VIBSL (Betaine aldehyde dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=betB PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.958e-42
Identity = 88/195 (45.13%), Postives = 123/195 (63.08%), Query Frame = -3
Query:  216 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV 788
            C  G+R YVHE +Y++F+++ K R  + I+G+P     + G  I  E   KVL  I    +S ATL  GG ++ + G     FV PTVF+D  DDM   Q EIFGPV S+LKF + DDVIRRAN T++GLAAGVFT++   A+ ++  ++AG  W+N +    A +P GGYKLSG+GRE G  +L  Y Q K+++
Sbjct:  281 CTNGTRVYVHESIYNDFIDQLKTRTEKLIIGNPMDMETQIGALISKEHLSKVLEAIELAKQSGATLLTGGYQVTDNGLANGNFVIPTVFTDCHDDMPHVQQEIFGPVMSVLKFTDEDDVIRRANDTQYGLAAGVFTQNLSRAHRVIHQMQAGICWVNTWGDSPAEMPVGGYKLSGVGRENGPETLLHYTQTKSIL 475          
The following BLAST results are available for this feature:
BLAST of CV712659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
ALDH5_YEAS73.733e-4545.18Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
ALDH5_YEAST8.316e-4545.18Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
BETB_RHILW2.675e-4343.84Betaine aldehyde dehydrogenase OS=Rhizobium legumi... [more]
BETB_RHIEC2.675e-4345.60Betaine aldehyde dehydrogenase OS=Rhizobium etli (... [more]
BETB_AGRRK4.563e-4344.33Betaine aldehyde dehydrogenase OS=Agrobacterium ra... [more]
BETB_RHIE67.783e-4343.84Betaine aldehyde dehydrogenase OS=Rhizobium etli (... [more]
ALDH6_YEAST1.017e-4245.03Magnesium-activated aldehyde dehydrogenase, cytoso... [more]
BETB_RHILO1.328e-4245.36Betaine aldehyde dehydrogenase OS=Rhizobium loti G... [more]
BETB_RHIL31.328e-4244.56Betaine aldehyde dehydrogenase OS=Rhizobium legumi... [more]
BETB_VIBSL2.958e-4245.13Betaine aldehyde dehydrogenase OS=Vibrio splendidu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L13_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712659 ID=CV712659; Name=CV712659; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTCAGTGAAAGCTGCCTTGATCAACAGACATGCAT
CATTGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATC
CATTTGCTCCATAATTACAAGCTGATATTTGCACGCTGTCCTTATTCATA
AACACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAGAGCCATGCTGG
GTTCTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGC
TGTAAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAA
GGAATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGC
TCTCAGTGCACGCATCATGGTGTTAGCAGTGTCTGCACTCTTGGTGAAAA
CCCCAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCA
TCAGTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATC
CTGTGCTATCAACATGTCATCCTTAACATCTGAGAAGACAGTTGGCTGAA
CAAAGTAGCCTCTGTTGCCCAATCTATCACCTCCACACTCAAGGGTTGCA
TTGCTTTCAATTCCAGACCTTATGTACCTAAGGACCTTCTCAAATTGCTC
TGGATCAATCTGAGGACCTTGTTCAACACCACTCTTGAAGGGATCGCCAA
CAATACGCCTCATAGCACGTGCCTTTGCTTTTTCTACAAACTCGTCATAT
ACACGCTCATGTACATAAGTACGAGATCCAGCACAGCAAC
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