CV712659

Overview
NameCV712659
Unique NameCV712659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: ALDHY_YEAST (Aldehyde dehydrogenase 2, mitochondrial OS=Saccharomyces cerevisiae GN=ALD2 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.958e-42
Identity = 90/182 (49.45%), Postives = 121/182 (66.48%), Query Frame = -3
Query:  246 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNR-GYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSL 788
            C A SR  VHE +YDE VE+   +A ++++G+PF+S    GPQI   +F+ + R I S     A + CGG R  +  GY++QPTVF+DV D+M IA++EIFGPV +I +FK  D+ I+R + T++GLAA VFTK  D A  +  AL+AGTVW+NC  V    IPFGG K SG+GRE G Y L
Sbjct:  331 CIAQSRITVHESIYDEIVERDLEKAKKQVLGNPFESDTRYGPQILKIEFDSIPRLINSAKAEGAKVLCGGGRDDSCVGYYIQPTVFADVTDEMRIAKEEIFGPVITISRFKSVDEAIKRVDNTKYGLAAYVFTK--DKAIRISAALKAGTVWVNCVHVASYQIPFGGNKNSGMGRELGEYGL 510          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: FTHFD_XENTR (10-formyltetrahydrofolate dehydrogenase OS=Xenopus tropicalis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.045e-42
Identity = 81/192 (42.19%), Postives = 122/192 (63.54%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFK--ETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C A  R ++ E ++DEFV++      +  +GDP     + GPQ      +K++ Y ++G++  A L  GG ++   G+F +PT+F+DV D+M IA++E FGP+  I KFK  + D+V++RAN T FGLA+GVFTK    A  +   L+AGTV++N Y+  D A PFGG+K SG G++ G  +LN YL+ KAV
Sbjct:  707 CIAAGRLFLEESIHDEFVKRVVGEVKKMKIGDPLDRSTDHGPQNHKAHLDKLIEYCQTGVKEGAKLVYGGKQVERPGFFFEPTIFTDVTDEMFIAKEESFGPIMIISKFKDGDVDEVLKRANNTEFGLASGVFTKDISKALYVSEKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKAV 898          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_VIBHB (Betaine aldehyde dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=betB PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.589e-42
Identity = 92/195 (47.18%), Postives = 118/195 (60.51%), Query Frame = -3
Query:  216 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV 788
            C  G+R +VHE +YDEFV + K R    +VGDP     + G  I  E   KVL  I     S ATL  GG ++   G     FV PTVF D +DDM   Q EIFGPV S+LKF + D+VI RAN T +GLAAGVFT++   A+ ++  ++AG  WIN +    A +P GGYKLSGIGRE G+ +L  Y Q K+V+
Sbjct:  281 CTHGTRVFVHEGIYDEFVVQLKKRTELLVVGDPLDEQTQIGALISKEHESKVLSAIEQAKASKATLLTGGYKVTENGLASGNFVVPTVFIDCEDDMPHVQQEIFGPVMSVLKFSDEDEVIARANNTDYGLAAGVFTQNLSRAHRVIHQIQAGICWINTWGDSPAEMPVGGYKLSGIGRENGVETLTHYTQTKSVL 475          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_RHOS5 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=betB PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.124e-41
Identity = 84/190 (44.21%), Postives = 118/190 (62.11%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +V + + + F+ +   RA    +GDP    V+ GP + P Q EKVL YI         L CGG+   + G +VQPTVF+DV D M +A++E+FGPV ++L F+  ++VI RAN T FGLAAGVFT     A+ ++  L+AGT WIN Y++     PFGG K+SG+GRE G  ++  Y QVK+V
Sbjct:  283 CSNGTRVFVQKGIKEAFLARLAERADAIQMGDPLDPEVQMGPLVSPAQLEKVLSYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDGMTLAREEVFGPVMAVLDFETEEEVIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKMSGVGRENGRAAVEHYTQVKSV 472          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_VIBVY (Betaine aldehyde dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betB PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.468e-41
Identity = 94/194 (48.45%), Postives = 119/194 (61.34%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R YV   +YD FVE+ K R  + IVGDP     + G  I     EKVL  I S  ES ATL  GG ++  RG     FV PTVF D +D+M   Q+EIFGPV S+L F + D+VI RAN T++GLAAGVFT++   A+ ++  L+AG  WIN +    A +P GGYKLSGIGRE G  +L  Y Q K+V
Sbjct:  281 CTHGTRVYVQRAMYDAFVEQLKERTEKLIVGDPMNMETQIGSLISKSHLEKVLGAISSAKESGATLLTGGFQVTERGLEKGCFVAPTVFVDCRDEMPHVQNEIFGPVMSVLVFDDEDEVIARANNTQYGLAAGVFTQNLSKAHRVIHQLQAGICWINTWGNSPAEMPVGGYKLSGIGRENGQETLLHYTQTKSV 474          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_VIBVU (Betaine aldehyde dehydrogenase OS=Vibrio vulnificus GN=betB PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.468e-41
Identity = 94/194 (48.45%), Postives = 119/194 (61.34%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R YV   +YD FVE+ K R  + IVGDP     + G  I     EKVL  I S  ES ATL  GG ++  RG     FV PTVF D +D+M   Q+EIFGPV S+L F + D+VI RAN T++GLAAGVFT++   A+ ++  L+AG  WIN +    A +P GGYKLSGIGRE G  +L  Y Q K+V
Sbjct:  281 CTHGTRVYVQRAMYDAFVEQLKERTEKLIVGDPMNMETQIGSLISKSHLEKVLGAISSAKESGATLLTGGFQVTERGLEKGCFVAPTVFVDCRDEMPHVQNEIFGPVMSVLVFDDEDEVIARANNTQYGLAAGVFTQNLSKAHRVIHQLQAGICWINTWGNSPAEMPVGGYKLSGIGRENGQETLLHYTQTKSV 474          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_MARMS (Betaine aldehyde dehydrogenase OS=Marinomonas sp. (strain MWYL1) GN=betB PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.504e-41
Identity = 89/194 (45.88%), Postives = 120/194 (61.86%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +VH  + D F ++ K R    I+GDP     + G  I  +  +KVL YI++  ++ ATL CGG ++     ++G FV PTVF+D  DDM   +DEIFGPV S+L F + D+VI RAN T+ GLAAGVFTK    A+ ++  L+AG  WIN +    A +P GGYK SGIGRE GI +L  Y Q K+V
Sbjct:  281 CTNGTRVFVHADMLDAFTKELKQRTEAMIIGDPMDMDTQVGALISKDHMQKVLGYIQAAKDAGATLLCGGYQVTENGLDKGAFVAPTVFTDCTDDMPQVRDEIFGPVMSVLSFTDEDEVIARANDTKLGLAAGVFTKDFARAHRVINQLQAGICWINSWGASPAEMPVGGYKQSGIGRENGIETLYHYTQNKSV 474          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_VIBPA (Betaine aldehyde dehydrogenase OS=Vibrio parahaemolyticus GN=betB PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.270e-41
Identity = 89/195 (45.64%), Postives = 117/195 (60.00%), Query Frame = -3
Query:  216 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV 788
            C  G+R +VHE +YD+FV + K R  + +VGDP     + G  I  E   KVL  I S   S ATL  GG ++ + G     FV PTVF D  D M   Q EIFGPV S+LKF E  +VI RAN T +GLAAGVFT++   A+ ++  ++AG  W+N +    A +P GGYK SGIGRE G+ +L  Y Q K+V+
Sbjct:  281 CTNGTRVFVHESIYDDFVAQLKTRTEKLVVGDPLDENTQIGALISKEHESKVLSAIESAKASGATLLTGGYKVTDNGLQNGNFVAPTVFIDCDDSMSHVQQEIFGPVMSVLKFSEEAEVIERANDTDYGLAAGVFTQNLSRAHRVIHKIQAGICWVNAWGDSPAEMPVGGYKQSGIGRENGVETLKHYTQTKSVL 475          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: FTHFD_PONAB (10-formyltetrahydrofolate dehydrogenase OS=Pongo abelii GN=ALDH1L1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.578e-41
Identity = 83/192 (43.23%), Postives = 120/192 (62.50%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFK--ETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C A  R +V + ++DEFV +      +  VGDP     + GPQ       K++ Y + G++  ATL CGG+++   G+F +PTVF+DV+D M IA++E FGPV  I +F   + D V+ RAN T FGLA+GVFT+  + A  +   L+AGTV++N Y+  D A PFGG+K SG G++ G  +LN YL+VK V
Sbjct:  707 CIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGDPLDRDTDHGPQNHHAHLMKLMEYCQRGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDVDTVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTV 898          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_RHISN (Betaine aldehyde dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.243e-40
Identity = 82/193 (42.49%), Postives = 116/193 (60.10%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +V  ++ D F+ + K R    ++GDP     + GP +   Q +KVL YI  G    A L  GG   + +   G ++QPTVF+DV D+M IA++EIFGPV  +L F +  +V+ RAN T FGL+AGVFT     A+ ++  L AGT+WIN Y++    IPFGG K SG GRE  + +LN Y ++K V
Sbjct:  284 CSNGTRVFVQRKIKDAFLARLKERTEAIVIGDPMDEATQLGPMVSKAQRDKVLSYIEQGKAEGARLVTGGGIPNAVNTEGTYIQPTVFADVTDEMTIAREEIFGPVMCVLDFDDEAEVVARANATEFGLSAGVFTADLTRAHRVVDQLEAGTLWINTYNLAPVEIPFGGSKQSGFGRENSVAALNHYTELKTV 476          
The following BLAST results are available for this feature:
BLAST of CV712659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
ALDHY_YEAST2.958e-4249.45Aldehyde dehydrogenase 2, mitochondrial OS=Sacchar... [more]
FTHFD_XENTR5.045e-4242.1910-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
BETB_VIBHB6.589e-4247.18Betaine aldehyde dehydrogenase OS=Vibrio harveyi (... [more]
BETB_RHOS51.124e-4144.21Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_VIBVY1.468e-4148.45Betaine aldehyde dehydrogenase OS=Vibrio vulnificu... [more]
BETB_VIBVU1.468e-4148.45Betaine aldehyde dehydrogenase OS=Vibrio vulnificu... [more]
BETB_MARMS2.504e-4145.88Betaine aldehyde dehydrogenase OS=Marinomonas sp. ... [more]
BETB_VIBPA3.270e-4145.64Betaine aldehyde dehydrogenase OS=Vibrio parahaemo... [more]
FTHFD_PONAB5.578e-4143.2310-formyltetrahydrofolate dehydrogenase OS=Pongo a... [more]
BETB_RHISN1.243e-4042.49Betaine aldehyde dehydrogenase OS=Rhizobium sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L13_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712659 ID=CV712659; Name=CV712659; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTCAGTGAAAGCTGCCTTGATCAACAGACATGCAT
CATTGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATC
CATTTGCTCCATAATTACAAGCTGATATTTGCACGCTGTCCTTATTCATA
AACACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAGAGCCATGCTGG
GTTCTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGC
TGTAAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAA
GGAATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGC
TCTCAGTGCACGCATCATGGTGTTAGCAGTGTCTGCACTCTTGGTGAAAA
CCCCAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCA
TCAGTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATC
CTGTGCTATCAACATGTCATCCTTAACATCTGAGAAGACAGTTGGCTGAA
CAAAGTAGCCTCTGTTGCCCAATCTATCACCTCCACACTCAAGGGTTGCA
TTGCTTTCAATTCCAGACCTTATGTACCTAAGGACCTTCTCAAATTGCTC
TGGATCAATCTGAGGACCTTGTTCAACACCACTCTTGAAGGGATCGCCAA
CAATACGCCTCATAGCACGTGCCTTTGCTTTTTCTACAAACTCGTCATAT
ACACGCTCATGTACATAAGTACGAGATCCAGCACAGCAAC
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