CV712659

Overview
NameCV712659
Unique NameCV712659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_PSEFS (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) GN=betB PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.623e-40
Identity = 89/194 (45.88%), Postives = 117/194 (60.31%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +V + +   F  K   R  R  VGDP       GP +     E VL YI  G E  A L CGGDRL +    +G +V PTVF+D  D+M I ++EIFGPV SIL ++  ++VIRRAN T FGLAAG+ TK  + A+ ++  L AG  WIN +   DA +P GGYK SG+GRE GI SLN + ++K+V
Sbjct:  286 CTNGTRVFVPKHLQAAFEAKIVERVARIRVGDPQDENTNFGPLVSFAHMESVLGYIAKGKEQGARLLCGGDRLTDGDFAKGAYVAPTVFTDCTDEMTIVREEIFGPVMSILTYETEEEVIRRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSV 479          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_AGRT5 (Betaine aldehyde dehydrogenase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=betB PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.623e-40
Identity = 87/193 (45.08%), Postives = 113/193 (58.55%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +V ++    F+E  K R    I+GDP       GP +   Q EKVL YI  G    ATL  GG   + +   G +VQPTVF+DV DDM IA++EIFGPV  +L F + D+V+ RAN T FGLA GVFT     A+ ++  L AGT+WIN Y++    IPFGG K SG GRE    +L  Y ++K V
Sbjct:  290 CSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 482          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: FTHFD_RAT (10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus GN=Aldh1l1 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.120e-40
Identity = 81/192 (42.19%), Postives = 121/192 (63.02%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFK--ETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C A  R +V E ++++FV+K      +  +G+P +     GPQ       K++ Y + G++  ATL CGG+++   G+F QPTVF+DV+D M IA++E FGP+  I +F   + D V+ RAN T FGLA+GVFT+  + A  +   L+AGTV+IN Y+  D A PFGG+K SG G++ G  +LN YL++K V
Sbjct:  707 CIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 898          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_RHOS4 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=betB PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.120e-40
Identity = 83/190 (43.68%), Postives = 116/190 (61.05%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +V + + + F+ +   RA    +GDP    V+ GP +   Q EKVL YI         L CGG+   + G +VQPTVF+DV D M +A++E+FGPV ++L F+  ++ I RAN T FGLAAGVFT     A+ ++  L+AGT WIN Y++     PFGG KLSG+GRE G  ++  Y QVK+V
Sbjct:  283 CSNGTRVFVQKGIKEAFLARLAERADAIRMGDPLDPEVQMGPLVSQAQLEKVLAYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDAMTLAREEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVQHYTQVKSV 472          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_RHOS1 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=betB PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.120e-40
Identity = 83/190 (43.68%), Postives = 116/190 (61.05%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +V + + + F+ +   RA    +GDP    V+ GP +   Q EKVL YI         L CGG+   + G +VQPTVF+DV D M +A++E+FGPV ++L F+  ++ I RAN T FGLAAGVFT     A+ ++  L+AGT WIN Y++     PFGG KLSG+GRE G  ++  Y QVK+V
Sbjct:  283 CSNGTRVFVQKGIKEAFLARLAERADAIRMGDPLDPEVQMGPLVSQAQLEKVLAYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDAMTLAREEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVEHYTQVKSV 472          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: AL1L2_HUMAN (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Homo sapiens GN=ALDH1L2 PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.768e-40
Identity = 82/192 (42.71%), Postives = 120/192 (62.50%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFK--ETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C A  R +V E ++DEFV +      +  +GDP     + GPQ      EK+L+Y  +G++  ATL  GG ++   G+F++PTVF+DV+D M +A++E FGP+  I KF+  + D V++RAN T +GLA+GVFT+  + A  +   L AGTV+IN Y+  D A PFGG K SG G++ G  +LN YL+ K V
Sbjct:  728 CIAAGRLFVEESIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHKAHLEKLLQYCETGVKEGATLVYGGRQVQRPGFFMEPTVFTDVEDYMYLAKEESFGPIMVISKFQNGDIDGVLQRANSTEYGLASGVFTRDINKAMYVSEKLEAGTVFINTYNKTDVAAPFGGVKQSGFGKDLGEEALNEYLKTKTV 919          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: FTHFD_MOUSE (10-formyltetrahydrofolate dehydrogenase OS=Mus musculus GN=Aldh1l1 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.616e-40
Identity = 80/192 (41.67%), Postives = 120/192 (62.50%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFK--ETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C A  R +V + ++D+FV+K      +  +G+P       GPQ       K++ Y + G++  ATL CGG+++   G+F QPTVF+DV+D M IA++E FGP+  I +F   + D V+ RAN T FGLA+GVFT+  + A  +   L+AGTV++N Y+  D A PFGG+K SG G++ G  +LN YL++K V
Sbjct:  707 CIAAGRLFVEDSIHDQFVQKVVEEVGKMKIGNPLDRDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 898          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: FTHFD_HUMAN (10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens GN=ALDH1L1 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.616e-40
Identity = 82/192 (42.71%), Postives = 120/192 (62.50%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFK--ETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C A  R +V + ++DEFV +      +  VG+P     + GPQ       K++ Y + G++  ATL CGG+++   G+F +PTVF+DV+D M IA++E FGPV  I +F   + D V+ RAN T FGLA+GVFT+  + A  +   L+AGTV++N Y+  D A PFGG+K SG G++ G  +LN YL+VK V
Sbjct:  707 CIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTV 898          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: FTHFD_XENLA (10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.722e-40
Identity = 79/192 (41.15%), Postives = 120/192 (62.50%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFK--ETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C A  R ++ E ++DEFV++      +  +GDP     + GPQ      +K++ Y ++G++    L  GG ++   G+F +PT+F+DV D+M IA++E FGPV  I KF   + D V++RAN + FGLA+GVFTK  + A  +   L+AGTV++N Y+  D A PFGG+K SG G++ G  +LN YL+ KAV
Sbjct:  707 CIAAGRLFLEESIHDEFVKRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLIEYCQTGVKEGGKLVYGGKQVERPGFFFEPTIFTDVTDEMFIAKEESFGPVMIISKFNDGDIDGVLKRANDSEFGLASGVFTKDINKALYVSEKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKAV 898          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_BURP1 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=betB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.722e-40
Identity = 91/194 (46.91%), Postives = 114/194 (58.76%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +V + V D FVE+  AR  R  VG P  S    GP     Q +KVL YI SG    A L  GG RL N     G +V PTVF D +DDM I ++EIFGPV SIL F+  D+ I RAN T +GLAAGV T++   A+  +  L AG  WIN +    A +P GGYK SG+GRE GI +L  Y ++K+V
Sbjct:  285 CTNGTRVFVQQAVKDAFVERVLARVARIRVGKPSDSDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
The following BLAST results are available for this feature:
BLAST of CV712659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
BETB_PSEFS1.623e-4045.88Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
BETB_AGRT51.623e-4045.08Betaine aldehyde dehydrogenase OS=Agrobacterium tu... [more]
FTHFD_RAT2.120e-4042.1910-formyltetrahydrofolate dehydrogenase OS=Rattus ... [more]
BETB_RHOS42.120e-4043.68Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_RHOS12.120e-4043.68Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
AL1L2_HUMAN2.768e-4042.71Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
FTHFD_MOUSE3.616e-4041.6710-formyltetrahydrofolate dehydrogenase OS=Mus mus... [more]
FTHFD_HUMAN3.616e-4042.7110-formyltetrahydrofolate dehydrogenase OS=Homo sa... [more]
FTHFD_XENLA4.722e-4041.1510-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
BETB_BURP14.722e-4046.91Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L13_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712659 ID=CV712659; Name=CV712659; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTCAGTGAAAGCTGCCTTGATCAACAGACATGCAT
CATTGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATC
CATTTGCTCCATAATTACAAGCTGATATTTGCACGCTGTCCTTATTCATA
AACACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAGAGCCATGCTGG
GTTCTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGC
TGTAAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAA
GGAATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGC
TCTCAGTGCACGCATCATGGTGTTAGCAGTGTCTGCACTCTTGGTGAAAA
CCCCAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCA
TCAGTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATC
CTGTGCTATCAACATGTCATCCTTAACATCTGAGAAGACAGTTGGCTGAA
CAAAGTAGCCTCTGTTGCCCAATCTATCACCTCCACACTCAAGGGTTGCA
TTGCTTTCAATTCCAGACCTTATGTACCTAAGGACCTTCTCAAATTGCTC
TGGATCAATCTGAGGACCTTGTTCAACACCACTCTTGAAGGGATCGCCAA
CAATACGCCTCATAGCACGTGCCTTTGCTTTTTCTACAAACTCGTCATAT
ACACGCTCATGTACATAAGTACGAGATCCAGCACAGCAAC
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