CV712659

Overview
NameCV712659
Unique NameCV712659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_BURP0 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=betB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.722e-40
Identity = 91/194 (46.91%), Postives = 114/194 (58.76%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +V + V D FVE+  AR  R  VG P  S    GP     Q +KVL YI SG    A L  GG RL N     G +V PTVF D +DDM I ++EIFGPV SIL F+  D+ I RAN T +GLAAGV T++   A+  +  L AG  WIN +    A +P GGYK SG+GRE GI +L  Y ++K+V
Sbjct:  285 CTNGTRVFVQQAVKDAFVERVLARVARIRVGKPSDSDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_BURM1 (Betaine aldehyde dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=betB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.722e-40
Identity = 87/194 (44.85%), Postives = 114/194 (58.76%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +VH  + D F +K   R  R  VG P  +    GP +   Q +KVL +I SG    A L  GG RL       G +V PTVF D +DDM I ++EIFGPV SIL+F+  D+VI RAN T +GLAAGV T++   A+  +  L AG  WIN +    A +P GGYK SG+GRE GI +L  Y ++K+V
Sbjct:  285 CTNGTRVFVHRSIKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTEGHFANGQYVAPTVFGDCRDDMKIVREEIFGPVMSILEFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_BURCH (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=betB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.722e-40
Identity = 87/194 (44.85%), Postives = 115/194 (59.28%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +VH  + D F +K   R  R  VG P  +    GP +   Q +KVL +I SG    A L  GG RL +     G +V PTVF D +DDM I ++EIFGPV SIL+F+  D+VI RAN T +GLAAGV T++   A+  +  L AG  WIN +    A +P GGYK SG+GRE GI +L  Y ++K+V
Sbjct:  285 CTNGTRVFVHRSIKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILEFESEDEVIARANDTHYGLAAGVVTENLSRAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_BURCC (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=betB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.722e-40
Identity = 87/194 (44.85%), Postives = 115/194 (59.28%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +VH  + D F +K   R  R  VG P  +    GP +   Q +KVL +I SG    A L  GG RL +     G +V PTVF D +DDM I ++EIFGPV SIL+F+  D+VI RAN T +GLAAGV T++   A+  +  L AG  WIN +    A +P GGYK SG+GRE GI +L  Y ++K+V
Sbjct:  285 CTNGTRVFVHRSIKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILEFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_BURCA (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=betB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.722e-40
Identity = 87/194 (44.85%), Postives = 115/194 (59.28%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +VH  + D F +K   R  R  VG P  +    GP +   Q +KVL +I SG    A L  GG RL +     G +V PTVF D +DDM I ++EIFGPV SIL+F+  D+VI RAN T +GLAAGV T++   A+  +  L AG  WIN +    A +P GGYK SG+GRE GI +L  Y ++K+V
Sbjct:  285 CTNGTRVFVHRSIKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILEFESEDEVIARANDTHYGLAAGVVTENLSRAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_RHOSK (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=betB PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.167e-40
Identity = 83/190 (43.68%), Postives = 115/190 (60.53%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +V + + + F+ +   RA    +GDP    V+ GP +   Q EKVL YI         L CGG+   + G +VQPTVF+DV D M +A +E+FGPV ++L F+  ++ I RAN T FGLAAGVFT     A+ ++  L+AGT WIN Y++     PFGG KLSG+GRE G  ++  Y QVK+V
Sbjct:  283 CSNGTRVFVQKGIKEAFLARLAERADAIRMGDPLDPEVQMGPLVSQAQLEKVLAYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDAMTLACEEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVEHYTQVKSV 472          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_PSEU2 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=betB PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.055e-40
Identity = 88/194 (45.36%), Postives = 115/194 (59.28%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +V   +  EF  K   R  R   G+P    +  GP +  E  E VL YI  G E  A L CGGDRL     ++G FV PTVF+D  D+M I ++EIFGPV SIL +   D+V+RRAN T FGLAAG+ T+  + A+ ++  L AG  WIN +    A +P GGYK SG+GRE GI SL  Y ++K+V
Sbjct:  286 CTNGTRVFVPNALKAEFEAKILERVKRIRAGNPEDENINFGPLVSFEHMESVLGYIAKGKEQGARLLCGGDRLTGGVFDKGAFVAPTVFTDCTDEMTIVREEIFGPVMSILGYDTEDEVVRRANDTDFGLAAGIVTRDLNRAHRVIHLLEAGICWINAWGESAAQMPVGGYKQSGVGRENGISSLAQYTRIKSV 479          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: AL1L2_MOUSE (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Mus musculus GN=Aldh1l2 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.055e-40
Identity = 81/192 (42.19%), Postives = 120/192 (62.50%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFK--ETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C A  R +V E ++DEFV +      +  +GDP     + GPQ      EK+L+Y  +G++  ATL  GG ++   G+F++PTVF+ V+D M +A++E FGP+  I KF+  + D V++RAN T +GLA+GVFT+  + A  +   L AGTV+IN Y+  D A PFGG K SG G++ G  +LN YL++K V
Sbjct:  728 CIAAGRLFVEEAIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHRAHLEKLLQYCETGVQEGATLVYGGRQVQRPGFFMEPTVFTGVEDHMYLAKEESFGPIMVISKFQNGDIDGVLQRANNTEYGLASGVFTRDINKAMYVSDKLEAGTVFINTYNKTDVAAPFGGMKQSGFGKDLGEEALNEYLKIKTV 919          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_BURCJ (Betaine aldehyde dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=betB PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.374e-39
Identity = 87/194 (44.85%), Postives = 114/194 (58.76%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R ++H  V D F +K   R  R  VG P  +    GP +   Q +KVL +I SG    A L  GG RL +     G +V PTVF D +DDM I ++EIFGPV SIL F+  D+VI RAN T +GLAAGV T++   A+  +  L AG  WIN +    A +P GGYK SG+GRE GI +L  Y ++K+V
Sbjct:  285 CTNGTRVFMHRSVKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILDFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
BLAST of CV712659 vs. ExPASy Swiss-Prot
Match: BETB_BURS3 (Betaine aldehyde dehydrogenase OS=Burkholderia sp. (strain 383) GN=betB PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.794e-39
Identity = 86/194 (44.33%), Postives = 114/194 (58.76%), Query Frame = -3
Query:  219 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 788
            C  G+R +VH  + D F ++   R  R  VG P  +    GP +   Q +KVL +I SG    A L  GG RL +     G +V PTVF D +DDM I ++EIFGPV SIL F+  D+VI RAN T +GLAAGV T++   A+  +  L AG  WIN +    A +P GGYK SG+GRE GI +L  Y ++K+V
Sbjct:  285 CTNGTRVFVHRSIKDAFTQRVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILDFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
The following BLAST results are available for this feature:
BLAST of CV712659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
BETB_BURP04.722e-4046.91Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURM14.722e-4044.85Betaine aldehyde dehydrogenase OS=Burkholderia mul... [more]
BETB_BURCH4.722e-4044.85Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURCC4.722e-4044.85Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURCA4.722e-4044.85Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_RHOSK6.167e-4043.68Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_PSEU28.055e-4045.36Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
AL1L2_MOUSE8.055e-4042.19Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
BETB_BURCJ1.374e-3944.85Betaine aldehyde dehydrogenase OS=Burkholderia cep... [more]
BETB_BURS31.794e-3944.33Betaine aldehyde dehydrogenase OS=Burkholderia sp.... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L13_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712659 ID=CV712659; Name=CV712659; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTCAGTGAAAGCTGCCTTGATCAACAGACATGCAT
CATTGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATC
CATTTGCTCCATAATTACAAGCTGATATTTGCACGCTGTCCTTATTCATA
AACACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAGAGCCATGCTGG
GTTCTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGC
TGTAAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAA
GGAATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGC
TCTCAGTGCACGCATCATGGTGTTAGCAGTGTCTGCACTCTTGGTGAAAA
CCCCAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCA
TCAGTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATC
CTGTGCTATCAACATGTCATCCTTAACATCTGAGAAGACAGTTGGCTGAA
CAAAGTAGCCTCTGTTGCCCAATCTATCACCTCCACACTCAAGGGTTGCA
TTGCTTTCAATTCCAGACCTTATGTACCTAAGGACCTTCTCAAATTGCTC
TGGATCAATCTGAGGACCTTGTTCAACACCACTCTTGAAGGGATCGCCAA
CAATACGCCTCATAGCACGTGCCTTTGCTTTTTCTACAAACTCGTCATAT
ACACGCTCATGTACATAAGTACGAGATCCAGCACAGCAAC
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