CV712657

Overview
NameCV712657
Unique NameCV712657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_PLAOC (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Platanus occidentalis GN=ndhK PE=3 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 3.824e-77
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LLDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLDRTTQNSVISTTPNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_NYMAL (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Nymphaea alba GN=ndhK PE=3 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 3.824e-77
Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNS+EF L DRTTPNS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSMEFPLFDRTTPNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_NUPAD (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Nuphar advena GN=ndhK PE=3 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 3.824e-77
Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNS+EF  LDRTTPNS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSMEFPFLDRTTPNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_ILLOL (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Illicium oligandrum GN=ndhK PE=3 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 3.824e-77
Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNS+ FSLLDRTT NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD+ILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSMRFSLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADIILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_NANDO (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Nandina domestica GN=ndhK PE=3 SV=2)

HSP 1 Score: 287.73 bits (735), Expect = 4.995e-77
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LLDR T NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLDRITQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_GOSHI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Gossypium hirsutum GN=ndhK PE=3 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.995e-77
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LLDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLDRTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_GOSBA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Gossypium barbadense GN=ndhK PE=3 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.995e-77
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LLDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLDRTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_CUCSA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus GN=ndhK PE=3 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.995e-77
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LLDRTT  S ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_CARPA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Carica papaya GN=ndhK PE=3 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.995e-77
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LLDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLDRTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_FAGEA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=ndhK PE=3 SV=2)

HSP 1 Score: 287.345 bits (734), Expect = 6.523e-77
Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNS+EF  LDR TPNS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSVEFLPLDRITPNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
The following BLAST results are available for this feature:
BLAST of CV712657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHK_PLAOC3.824e-7797.24NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_NYMAL3.824e-7796.55NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_NUPAD3.824e-7796.55NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_ILLOL3.824e-7796.55NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_NANDO4.995e-7797.24NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_GOSHI4.995e-7797.24NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_GOSBA4.995e-7797.24NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_CUCSA4.995e-7797.24NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_CARPA4.995e-7797.24NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_FAGEA6.523e-7796.55NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L12_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712657 ID=CV712657; Name=CV712657; organism=Citrus sinensis; type=EST; length=802bp
GCATCTATAACGAGCCTCTGGTTTAGGCGGGCAACCCGGCAAATAAACAT
CCACGGGAATTAGCTTATCAACTCCTCGAACAGTACTATACGAATCGGTA
CTGAACATCCCCCCTGTAATTGTACATGCTCCCATAGCAATAACATATTT
TGGTTCAGGCATTTGTTCATATAATCTCACTAAAGAAGGAGCCATTTTCA
TTGTTACTGTACCAGCTGTTAAAATTAGGTCCGCCTGTCTAGGGCTCGAT
CTTGGTACCAGCCCATAACGGTCAAAATCGAACCGCGAGCCGATTAATGA
AGCAAATTCAATGAAACAACAACTGGTACCATAAAGAAGCGGCCATAAGC
TGGAGAGTCTTGACCAATTTGAAAGATCGTTTGATGTAGTTGAAATAAAT
GAATTTGGGGTTGTTCGATCAAGTAAGGAAAATTCAATAGAATTCATAAT
TCTCTCAATGTTATTTTTTGTTTTTTTTTTTTTTTTTACTTTTTTGTTAT
TGTCTGAATATTCAGAAACTAAGACCACTCTAATGCTCCTTTTCGCCACG
CATAAACTAAACCAACAATTAGGATAAGCATGAAAATGAAAGCTTCTATA
AATACGGGTACCCCCAATACATCAAAACTCATTGCCCATGGATAAAGAAA
AACGGTTTCAACATCAAAAACAACAAAAACTAGAGCAAACATATAATACC
GGATTCGAAAATTGTAACCAAGCATCGCCCATTGGTTCGATACCCGATTC
ATAACTAGAAAGTTTCTCTGGCCCTTTGTTAATCGGGGCTAAAACTGCGG
AA
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