CV712657

Overview
NameCV712657
Unique NameCV712657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_PELHO (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Pelargonium hortorum GN=ndhK PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 8.519e-77
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNS+EF LLDR T NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADL+LTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSVEFPLLDRRTKNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLVLTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_DIOEL (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Dioscorea elephantipes GN=ndhK PE=3 SV=2)

HSP 1 Score: 286.96 bits (733), Expect = 8.519e-77
Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MN IEF+LLD+TTPNS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQM EPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNLIEFTLLDQTTPNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMAEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_TOBAC (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Nicotiana tabacum GN=ndhK PE=3 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 1.113e-76
Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSI+F LLDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIQFPLLDRTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_SOLTU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Solanum tuberosum GN=ndhK PE=3 SV=3)

HSP 1 Score: 286.574 bits (732), Expect = 1.113e-76
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSI+F LLDRT PNS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQ+DLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIQFPLLDRTAPNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQSDLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_SOLLC (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Solanum lycopersicum GN=ndhK PE=3 SV=3)

HSP 1 Score: 286.574 bits (732), Expect = 1.113e-76
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSI+F LLDRT PNS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQ+DLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIQFPLLDRTAPNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQSDLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_SOLBU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Solanum bulbocastanum GN=ndhK PE=3 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 1.113e-76
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSI+F LLDRT PNS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQ+DLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIQFPLLDRTAPNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQSDLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_RANMC (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Ranunculus macranthus GN=ndhK PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.113e-76
Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LL++TT NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLNQTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_POPTR (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Populus trichocarpa GN=ndhK PE=3 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 1.113e-76
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LLDRTTP S ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPE KYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLDRTTPISVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEQKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_POPAL (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Populus alba GN=ndhK PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.113e-76
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LLDRTTP S ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPE KYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLDRTTPISVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEQKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_NICSY (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Nicotiana sylvestris GN=ndhK PE=3 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 1.113e-76
Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSI+F LLDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIQFPLLDRTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
The following BLAST results are available for this feature:
BLAST of CV712657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHK_PELHO8.519e-7795.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_DIOEL8.519e-7796.55NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_TOBAC1.113e-7696.55NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_SOLTU1.113e-7695.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_SOLLC1.113e-7695.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_SOLBU1.113e-7695.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_RANMC1.113e-7696.55NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_POPTR1.113e-7697.24NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_POPAL1.113e-7697.24NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_NICSY1.113e-7696.55NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L12_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712657 ID=CV712657; Name=CV712657; organism=Citrus sinensis; type=EST; length=802bp
GCATCTATAACGAGCCTCTGGTTTAGGCGGGCAACCCGGCAAATAAACAT
CCACGGGAATTAGCTTATCAACTCCTCGAACAGTACTATACGAATCGGTA
CTGAACATCCCCCCTGTAATTGTACATGCTCCCATAGCAATAACATATTT
TGGTTCAGGCATTTGTTCATATAATCTCACTAAAGAAGGAGCCATTTTCA
TTGTTACTGTACCAGCTGTTAAAATTAGGTCCGCCTGTCTAGGGCTCGAT
CTTGGTACCAGCCCATAACGGTCAAAATCGAACCGCGAGCCGATTAATGA
AGCAAATTCAATGAAACAACAACTGGTACCATAAAGAAGCGGCCATAAGC
TGGAGAGTCTTGACCAATTTGAAAGATCGTTTGATGTAGTTGAAATAAAT
GAATTTGGGGTTGTTCGATCAAGTAAGGAAAATTCAATAGAATTCATAAT
TCTCTCAATGTTATTTTTTGTTTTTTTTTTTTTTTTTACTTTTTTGTTAT
TGTCTGAATATTCAGAAACTAAGACCACTCTAATGCTCCTTTTCGCCACG
CATAAACTAAACCAACAATTAGGATAAGCATGAAAATGAAAGCTTCTATA
AATACGGGTACCCCCAATACATCAAAACTCATTGCCCATGGATAAAGAAA
AACGGTTTCAACATCAAAAACAACAAAAACTAGAGCAAACATATAATACC
GGATTCGAAAATTGTAACCAAGCATCGCCCATTGGTTCGATACCCGATTC
ATAACTAGAAAGTTTCTCTGGCCCTTTGTTAATCGGGGCTAAAACTGCGG
AA
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