CV712657

Overview
NameCV712657
Unique NameCV712657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_AETCO (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Aethionema cordifolium GN=ndhK PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.237e-76
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSI+F +LDRTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIKFPVLDRTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_PHAVU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Phaseolus vulgaris GN=ndhK PE=3 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.228e-76
Identity = 139/145 (95.86%), Postives = 140/145 (96.55%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LLD+TT NS ISTT ND SNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLDQTTQNSVISTTLNDFSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_NICTO (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Nicotiana tomentosiformis GN=ndhK PE=3 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 4.228e-76
Identity = 139/145 (95.86%), Postives = 140/145 (96.55%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSI+F LLDRT  NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIQFPLLDRTAQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_IPOPU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Ipomoea purpurea GN=ndhK PE=3 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.228e-76
Identity = 139/145 (95.86%), Postives = 140/145 (96.55%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSI+F LLDRT  NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIQFPLLDRTAKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_EUCGG (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=ndhK PE=3 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 4.228e-76
Identity = 140/145 (96.55%), Postives = 140/145 (96.55%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LL RTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLARTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_ATRBE (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Atropa belladonna GN=ndhK PE=3 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 4.228e-76
Identity = 139/145 (95.86%), Postives = 140/145 (96.55%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSI+F LLDRT  NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIQFPLLDRTAQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_PEA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Pisum sativum GN=ndhK PE=1 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.212e-76
Identity = 139/145 (95.86%), Postives = 140/145 (96.55%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LLD+ T NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLDQKTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_CAPBU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Capsella bursa-pastoris GN=ndhK PE=3 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.212e-76
Identity = 138/145 (95.17%), Postives = 141/145 (97.24%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSI+F +LDRTT NS ISTT NDLSNW+RLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIKFPVLDRTTKNSVISTTLNDLSNWTRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_MORIN (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Morus indica GN=ndhK PE=3 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 9.419e-76
Identity = 141/146 (96.58%), Postives = 142/146 (97.26%), Query Frame = -2
Query:   13 MNSI-EFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSI EF LLDRTT NS ISTTS+DLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 146          
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_HELAN (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Helianthus annuus GN=ndhK PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 9.419e-76
Identity = 139/145 (95.86%), Postives = 139/145 (95.86%), Query Frame = -2
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF L  RTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLFHRTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145          
The following BLAST results are available for this feature:
BLAST of CV712657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHK_AETCO3.237e-7695.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_PHAVU4.228e-7695.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_NICTO4.228e-7695.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_IPOPU4.228e-7695.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_EUCGG4.228e-7696.55NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_ATRBE4.228e-7695.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_PEA7.212e-7695.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_CAPBU7.212e-7695.17NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_MORIN9.419e-7696.58NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_HELAN9.419e-7695.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L12_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712657 ID=CV712657; Name=CV712657; organism=Citrus sinensis; type=EST; length=802bp
GCATCTATAACGAGCCTCTGGTTTAGGCGGGCAACCCGGCAAATAAACAT
CCACGGGAATTAGCTTATCAACTCCTCGAACAGTACTATACGAATCGGTA
CTGAACATCCCCCCTGTAATTGTACATGCTCCCATAGCAATAACATATTT
TGGTTCAGGCATTTGTTCATATAATCTCACTAAAGAAGGAGCCATTTTCA
TTGTTACTGTACCAGCTGTTAAAATTAGGTCCGCCTGTCTAGGGCTCGAT
CTTGGTACCAGCCCATAACGGTCAAAATCGAACCGCGAGCCGATTAATGA
AGCAAATTCAATGAAACAACAACTGGTACCATAAAGAAGCGGCCATAAGC
TGGAGAGTCTTGACCAATTTGAAAGATCGTTTGATGTAGTTGAAATAAAT
GAATTTGGGGTTGTTCGATCAAGTAAGGAAAATTCAATAGAATTCATAAT
TCTCTCAATGTTATTTTTTGTTTTTTTTTTTTTTTTTACTTTTTTGTTAT
TGTCTGAATATTCAGAAACTAAGACCACTCTAATGCTCCTTTTCGCCACG
CATAAACTAAACCAACAATTAGGATAAGCATGAAAATGAAAGCTTCTATA
AATACGGGTACCCCCAATACATCAAAACTCATTGCCCATGGATAAAGAAA
AACGGTTTCAACATCAAAAACAACAAAAACTAGAGCAAACATATAATACC
GGATTCGAAAATTGTAACCAAGCATCGCCCATTGGTTCGATACCCGATTC
ATAACTAGAAAGTTTCTCTGGCCCTTTGTTAATCGGGGCTAAAACTGCGG
AA
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