CV712657

Overview
NameCV712657
Unique NameCV712657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_GUIAB (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Guizotia abyssinica GN=ndhK PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 9.419e-76
Identity = 139/145 (95.86%), Postives = 139/145 (95.86%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF L  RTT NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLFHRTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_DRANE (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Draba nemorosa GN=ndhK PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 9.419e-76
Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSI+F +LDRTT NS ISTT NDLSNWSRLSSLWP LYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIKFPVLDRTTKNSVISTTLNDLSNWSRLSSLWPFLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_PIPCE (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Piper cenocladum GN=ndhK PE=3 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 1.230e-75
Identity = 138/145 (95.17%), Postives = 141/145 (97.24%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNS++F LLDRTT +S ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSMKFPLLDRTTQSSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_CRUWA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Crucihimalaya wallichii GN=ndhK PE=3 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.230e-75
Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSI+F +LDRTT NS ISTT NDLSNWS LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIKFPVLDRTTKNSVISTTLNDLSNWSELSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_WHEAT (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Triticum aestivum GN=ndhK PE=3 SV=2)

HSP 1 Score: 282.722 bits (722), Expect = 1.607e-75
Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MN IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNLIEFPLLDQTSSNSVISTTPNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_LOLPR (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Lolium perenne GN=ndhK PE=3 SV=2)

HSP 1 Score: 282.722 bits (722), Expect = 1.607e-75
Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MN IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNLIEFPLLDQTSSNSVISTTPNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_JASNU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Jasminum nudiflorum GN=ndhK PE=3 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.607e-75
Identity = 138/145 (95.17%), Postives = 139/145 (95.86%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LLD+T  NS  STT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLDQTVQNSVFSTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_AGRST (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Agrostis stolonifera GN=ndhK PE=3 SV=2)

HSP 1 Score: 282.722 bits (722), Expect = 1.607e-75
Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MN IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNLIEFPLLDQTSSNSVISTTPNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_LUPLU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Lupinus luteus GN=ndhK PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.098e-75
Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF L DRTT NS ISTT N+LSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIA+GACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLRDRTTQNSVISTTLNELSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAIGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_HORVU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Hordeum vulgare GN=ndhK PE=1 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 2.098e-75
Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MN IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNLIEFPLLDQTSSNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
The following BLAST results are available for this feature:
BLAST of CV712657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHK_GUIAB9.419e-7695.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_DRANE9.419e-7695.17NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_PIPCE1.230e-7595.17NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_CRUWA1.230e-7595.17NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_WHEAT1.607e-7595.17NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_LOLPR1.607e-7595.17NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_JASNU1.607e-7595.17NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_AGRST1.607e-7595.17NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_LUPLU2.098e-7595.17NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_HORVU2.098e-7595.17NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L12_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712657 ID=CV712657; Name=CV712657; organism=Citrus sinensis; type=EST; length=802bp
GCATCTATAACGAGCCTCTGGTTTAGGCGGGCAACCCGGCAAATAAACAT
CCACGGGAATTAGCTTATCAACTCCTCGAACAGTACTATACGAATCGGTA
CTGAACATCCCCCCTGTAATTGTACATGCTCCCATAGCAATAACATATTT
TGGTTCAGGCATTTGTTCATATAATCTCACTAAAGAAGGAGCCATTTTCA
TTGTTACTGTACCAGCTGTTAAAATTAGGTCCGCCTGTCTAGGGCTCGAT
CTTGGTACCAGCCCATAACGGTCAAAATCGAACCGCGAGCCGATTAATGA
AGCAAATTCAATGAAACAACAACTGGTACCATAAAGAAGCGGCCATAAGC
TGGAGAGTCTTGACCAATTTGAAAGATCGTTTGATGTAGTTGAAATAAAT
GAATTTGGGGTTGTTCGATCAAGTAAGGAAAATTCAATAGAATTCATAAT
TCTCTCAATGTTATTTTTTGTTTTTTTTTTTTTTTTTACTTTTTTGTTAT
TGTCTGAATATTCAGAAACTAAGACCACTCTAATGCTCCTTTTCGCCACG
CATAAACTAAACCAACAATTAGGATAAGCATGAAAATGAAAGCTTCTATA
AATACGGGTACCCCCAATACATCAAAACTCATTGCCCATGGATAAAGAAA
AACGGTTTCAACATCAAAAACAACAAAAACTAGAGCAAACATATAATACC
GGATTCGAAAATTGTAACCAAGCATCGCCCATTGGTTCGATACCCGATTC
ATAACTAGAAAGTTTCTCTGGCCCTTTGTTAATCGGGGCTAAAACTGCGG
AA
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