CV712657

Overview
NameCV712657
Unique NameCV712657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_SPIOL (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Spinacia oleracea GN=ndhK PE=3 SV=3)

HSP 1 Score: 281.952 bits (720), Expect = 2.741e-75
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIEF LLD+   NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPR+SPRQADLILTAGTVTMKMAPSL+RLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_COFAR (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Coffea arabica GN=ndhK PE=3 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.741e-75
Identity = 138/145 (95.17%), Postives = 138/145 (95.17%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MNSIE  LLDRT  NS ISTT ND SNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNSIELPLLDRTAQNSVISTTLNDFSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_LEMMI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Lemna minor GN=ndhK PE=3 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 4.675e-75
Identity = 137/145 (94.48%), Postives = 139/145 (95.86%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MN IEF  LD+T PNS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFA+LIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MNLIEFPSLDQTMPNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFAALIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_SORBI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Sorghum bicolor GN=ndhK PE=3 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 6.105e-75
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            M+ IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MSLIEFPLLDQTSSNSVISTTPNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_SACOF (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Saccharum officinarum GN=ndhK PE=3 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 6.105e-75
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            M+ IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MSLIEFPLLDQTSSNSVISTTPNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_SACHY (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Saccharum hybrid GN=ndhK PE=3 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 6.105e-75
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            M+ IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MSLIEFPLLDQTSSNSVISTTPNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_BRADI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Brachypodium distachyon GN=ndhK PE=3 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 6.105e-75
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            M+ IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MSLIEFPLLDQTSSNSVISTTPNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_MAIZE (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Zea mays GN=ndhK PE=2 SV=3)

HSP 1 Score: 280.411 bits (716), Expect = 7.974e-75
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            M+ IEF LLD+T+ NS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA
Sbjct:    1 MSLIEFPLLDQTSSNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_CRYJA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cryptomeria japonica GN=ndhK PE=3 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 1.041e-74
Identity = 135/145 (93.10%), Postives = 140/145 (96.55%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            MN IE SLLD+TT NS ISTT NDLSNW+RLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADL++TAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVD+YLPGCPPKPEA
Sbjct:    1 MNPIESSLLDQTTSNSVISTTLNDLSNWARLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLLITAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDIYLPGCPPKPEA 145
[Close]
BLAST of CV712657 vs. ExPASy Swiss-Prot
Match: NDHK_TRACE (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Trachelium caeruleum GN=ndhK PE=5 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.957e-74
Identity = 135/145 (93.10%), Postives = 139/145 (95.86%), Query Frame = -2 
Query:   13 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA 447
            M SI+F LL+R T NS ISTT N+LSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKL+PVDVYLPGCPPKPEA
Sbjct:    1 MTSIDFPLLNRRTQNSVISTTPNELSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLLPVDVYLPGCPPKPEA 145
The following BLAST results are available for this feature:
BLAST of CV712657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHK_SPIOL2.741e-7594.48NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_COFAR2.741e-7595.17NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_LEMMI4.675e-7594.48NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_SORBI6.105e-7594.48NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_SACOF6.105e-7594.48NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_SACHY6.105e-7594.48NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_BRADI6.105e-7594.48NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_MAIZE7.974e-7594.48NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_CRYJA1.041e-7493.10NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_TRACE3.957e-7493.10NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L12_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712657 ID=CV712657; Name=CV712657; organism=Citrus sinensis; type=EST; length=802bp
GCATCTATAACGAGCCTCTGGTTTAGGCGGGCAACCCGGCAAATAAACAT
CCACGGGAATTAGCTTATCAACTCCTCGAACAGTACTATACGAATCGGTA
CTGAACATCCCCCCTGTAATTGTACATGCTCCCATAGCAATAACATATTT
TGGTTCAGGCATTTGTTCATATAATCTCACTAAAGAAGGAGCCATTTTCA
TTGTTACTGTACCAGCTGTTAAAATTAGGTCCGCCTGTCTAGGGCTCGAT
CTTGGTACCAGCCCATAACGGTCAAAATCGAACCGCGAGCCGATTAATGA
AGCAAATTCAATGAAACAACAACTGGTACCATAAAGAAGCGGCCATAAGC
TGGAGAGTCTTGACCAATTTGAAAGATCGTTTGATGTAGTTGAAATAAAT
GAATTTGGGGTTGTTCGATCAAGTAAGGAAAATTCAATAGAATTCATAAT
TCTCTCAATGTTATTTTTTGTTTTTTTTTTTTTTTTTACTTTTTTGTTAT
TGTCTGAATATTCAGAAACTAAGACCACTCTAATGCTCCTTTTCGCCACG
CATAAACTAAACCAACAATTAGGATAAGCATGAAAATGAAAGCTTCTATA
AATACGGGTACCCCCAATACATCAAAACTCATTGCCCATGGATAAAGAAA
AACGGTTTCAACATCAAAAACAACAAAAACTAGAGCAAACATATAATACC
GGATTCGAAAATTGTAACCAAGCATCGCCCATTGGTTCGATACCCGATTC
ATAACTAGAAAGTTTCTCTGGCCCTTTGTTAATCGGGGCTAAAACTGCGG
AA
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