CV712645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_RHAPU (Cytochrome c oxidase subunit 2 OS=Rhabdomys pumilio GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.760e-51 Identity = 89/153 (58.17%), Postives = 124/153 (81.05%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+ IL+ IA+PS +LY MDE+ +PA+T+K +GHQWYW+YEY+DY + L FDSYM P ++L+ G+LRLLEVDNR+V+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G++YGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAAILVLIALPSLRILYMMDEIN-NPALTVKTMGHQWYWSYEYTDY-----EDLCFDSYMTPTNELKPGELRLLEVDNRIVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_PONAB (Cytochrome c oxidase subunit 2 OS=Pongo abelii GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.760e-51 Identity = 95/153 (62.09%), Postives = 119/153 (77.78%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+IIL+ IA+PS +LY DE+ DP+ TIK+IGHQWYWTYEY+DY LIF+SYM+P LE G LRLL+VDNRVV+P + +R+++TS DVLHSW VPSLG+K DA+PGRLNQ + + R GVYYGQCSEICG NH+FM Sbjct: 61 METIWTILPAIILILIALPSLRILYLTDEIN-DPSFTIKSIGHQWYWTYEYTDYGG-----LIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_HYLSY (Cytochrome c oxidase subunit 2 OS=Hylobates syndactylus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.760e-51 Identity = 97/159 (61.01%), Postives = 119/159 (74.84%), Query Frame = -3 Query: 263 IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 739 I +E +WTI P+IIL+ IA+PS +LY DE+ DP+ TIKAIGHQWYW YEY+DY LIF+SYM+P LE G LRLLEVDNRVV+P + +R+++TS DVLHSW VPSLG+K DA+PGRLNQ + + R GVYYGQCSEICG NH+FM Sbjct: 55 ITDAQEMETVWTILPAIILVLIALPSLRILYLTDEIN-DPSFTIKAIGHQWYWAYEYTDYGG-----LIFNSYMLPPLFLEPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_HYLLA (Cytochrome c oxidase subunit 2 OS=Hylobates lar GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.760e-51 Identity = 97/159 (61.01%), Postives = 119/159 (74.84%), Query Frame = -3 Query: 263 IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 739 I +E +WTI P+IIL+ IA+PS +LY DE+ DP+ TIKAIGHQWYW YEY+DY LIF+SYM+P LE G LRLLEVDNRVV+P + +R+++TS DVLHSW VPSLG+K DA+PGRLNQ + + R GVYYGQCSEICG NH+FM Sbjct: 55 ITDAQEMETVWTILPAIILVLIALPSLRILYLTDEIN-DPSFTIKAIGHQWYWAYEYTDYGG-----LIFNSYMLPPLFLEPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_UROCA (Cytochrome c oxidase subunit 2 OS=Uromys caudimaculatus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.604e-51 Identity = 90/153 (58.82%), Postives = 122/153 (79.74%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+ IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYMIP ++L+ G LRLLEVDNRVV+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G++YGQCSEICG NH+FM Sbjct: 61 VETIWTILPAAILVLIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNELKPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGANHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_PANPA (Cytochrome c oxidase subunit 2 OS=Pan paniscus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.604e-51 Identity = 95/153 (62.09%), Postives = 120/153 (78.43%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+IIL+ IA+PS +LY DEV DP+ TIK+IGHQWYWTYEY+DY LIF+SYM+P LE G LRLL+VDNR+V+P + +R+++TS DVLHSWAVP+LG+K DA+PGRLNQ + + R GVYYGQCSEICG NH+FM Sbjct: 61 METVWTILPAIILVLIALPSLRILYMTDEVN-DPSFTIKSIGHQWYWTYEYTDYGG-----LIFNSYMLPPLFLEPGDLRLLDVDNRLVLPVEAPVRMMITSQDVLHSWAVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_NYCCO (Cytochrome c oxidase subunit 2 OS=Nycticebus coucang GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.604e-51 Identity = 88/153 (57.52%), Postives = 121/153 (79.08%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P++IL+ IA+PS +LY MDE+ P++T+K +GHQWYW+YEY+DY++ L FDSYM+ DLE G LRLLEVDNRV++P + +R++++S DVLHSW VP+LG+K DA+PGRLNQ ++ R G+YYGQCSEICG+NH+FM Sbjct: 61 VETVWTILPAVILILIALPSLRILYMMDEINT-PSMTLKTMGHQWYWSYEYTDYDN-----LCFDSYMVTTPDLEPGDLRLLEVDNRVILPTEMSIRMLISSEDVLHSWTVPALGIKTDAIPGRLNQATLMTSRPGIYYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_HIPAM (Cytochrome c oxidase subunit 2 OS=Hippopotamus amphibius GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.604e-51 Identity = 91/153 (59.48%), Postives = 122/153 (79.74%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYM+P DL+ G LRLLEVDNRVV+P +R++++S DVLHSWAVPSLG+K DA+PGRLNQ ++ R G++YGQCSEICG+NH+FM Sbjct: 61 VETVWTILPAIILILIALPSLRILYMMDEIN-NPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMVPTSDLKPGDLRLLEVDNRVVLPMDVTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_EENNA (Cytochrome c oxidase subunit 2 OS=Eeniella nana GN=COX2 PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.604e-51 Identity = 96/169 (56.80%), Postives = 127/169 (75.15%), Query Frame = -3 Query: 263 YKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 766 Y K+ + + + HG +E++WT FP+++L+ +A PSF LLY DEV+ PA+TIKA+G QWYW YEYSD+ +++ F+SYMIPED LE GQLR+L+VD VV P TH+R +VTSADV+H + +PSLG+K DA PGRLNQ S +QREGVYYGQCSE+CG H+ M Sbjct: 61 YNKSAMAYKYMNHGQFMEMMWTTFPAMMLLMMAFPSFMLLYMCDEVMA-PAMTIKAMGLQWYWKYEYSDFMVEKGETMEFESYMIPEDLLEDGQLRMLDVDASVVCPVDTHMRFMVTSADVIHDFCMPSLGIKIDAAPGRLNQTSALMQREGVYYGQCSELCGVMHSSM 228
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_TATEM (Cytochrome c oxidase subunit 2 OS=Taterillus emini GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 4.707e-51 Identity = 91/165 (55.15%), Postives = 130/165 (78.79%), Query Frame = -3 Query: 263 RIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 742 +++H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+D+ + L FDSYMIP ++L+ G+LR LEVDNR+V+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R GV+YGQCSEICG+NH+FM Sbjct: 49 KLIHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDF-----EDLSFDSYMIPTNELKPGELRQLEVDNRMVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGVFYGQCSEICGSNHSFM 207 The following BLAST results are available for this feature:
BLAST of CV712645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 312
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712645 ID=CV712645; Name=CV712645; organism=Citrus sinensis; type=EST; length=804bpback to top |