CV712645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_NEUCR (Cytochrome c oxidase subunit 2 OS=Neurospora crassa GN=cox-2 PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.849e-56 Identity = 101/179 (56.42%), Postives = 139/179 (77.65%), Query Frame = -3 Query: 263 ILVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 796 IL+ + ++ K+PI + + HGT IE++WTI P++IL+ IA PSF LLY MDEV DP++++ A GHQWYW+Y+Y D+ S+++ + FDSY++PE DLE G LR+LEVDNRV++P TH+R I+T+ DV+H +AVPSLGVKCDA P RLNQ+S+ + REGV+YGQCSEICG H+ M Sbjct: 54 ILLSIIRNYISTKSPISHKYLNHGTLIELIWTITPAVILILIAFPSFKLLYLMDEVS-DPSMSVLAEGHQWYWSYQYPDFLDSNDEFIEFDSYIVPESDLEEGALRMLEVDNRVILPELTHVRFIITAGDVIHDFAVPSLGVKCDAYPRRLNQVSVFINREGVFYGQCSEICGILHSSM 231
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_PICCA (Cytochrome c oxidase subunit 2 OS=Pichia canadensis GN=COX2 PE=3 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 3.721e-56 Identity = 102/167 (61.08%), Postives = 131/167 (78.44%), Query Frame = -3 Query: 263 KNPIPQR-IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 760 KNP+P + +VHG TIEI+WTI P+++L+ IA PSF LLY DEV+ PA+TIKAIG QWYW YEYSD+ + +++ F+SY+IPED LE GQL LL+ D +V P TH+R IV++ADV+H +AVPSLG+K DA PGRLNQ+S +QREGVYYGQCSE+CG H+ M Sbjct: 63 KNPLPHKYLVHGQTIEIIWTILPALVLLVIAFPSFILLYLCDEVI-SPAMTIKAIGLQWYWKYEYSDFINDSGETIEFESYVIPEDLLEDGQLPLLDTDTSIVCPVNTHIRFIVSAADVIHDFAVPSLGIKIDACPGRLNQVSALIQREGVYYGQCSELCGVAHSAM 228
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_WILSA (Cytochrome c oxidase subunit 2 OS=Williopsis saturnus GN=COX2 PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.114e-55 Identity = 101/167 (60.48%), Postives = 129/167 (77.25%), Query Frame = -3 Query: 263 KNPIPQR-IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 760 KNP+P + +VHG TIEI+WTI P+++L+ IA PSF LLY DEV+ PA+TIKAIG QWYW YEYSD+ + +++ F+SY+IPED LE GQLRLL+ D VV P TH+R IV++ADV+H +A+PSLG+K A PGRLNQ+S +QREGVYYG CSE CG H+ M Sbjct: 63 KNPLPHKYLVHGQTIEIIWTILPAVVLLIIAFPSFILLYLCDEVI-SPAMTIKAIGLQWYWRYEYSDFINDSGETIEFESYVIPEDLLEDGQLRLLDTDTSVVCPVNTHIRFIVSAADVIHDFAIPSLGIKVVASPGRLNQVSALIQREGVYYGMCSETCGVAHSAM 228
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_TRIRU (Cytochrome c oxidase subunit 2 OS=Trichophyton rubrum GN=COX2 PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.114e-55 Identity = 97/179 (54.19%), Postives = 136/179 (75.98%), Query Frame = -3 Query: 263 ILVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 796 +++ + F K+PI + + HGT IE++WTI P++IL+ IA PSF LLY MDEV+ DP++ I GHQWYW+Y+Y D+ ++D + + FDSY++PE DLE G LR+LEVDNRV++P TH R ++++ADV+HS+A PSLG+KCDA PGRLNQ S+ + R+G Y+GQCSEICG H+ M Sbjct: 45 MMITIIKSFVNTKSPISHKYMNHGTLIELIWTITPAVILILIAFPSFKLLYLMDEVM-DPSLVIYGEGHQWYWSYQYPDFTNADGEFVEFDSYIVPESDLEEGTLRMLEVDNRVIIPELTHTRFVISAADVIHSFACPSLGIKCDAYPGRLNQSSVYLNRQGTYFGQCSEICGILHSSM 222
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_ANOQU (Cytochrome c oxidase subunit 2 OS=Anopheles quadrimaculatus GN=COXII PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.114e-55 Identity = 98/159 (61.64%), Postives = 126/159 (79.25%), Query Frame = -3 Query: 263 IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 739 ++HG TIEI+WT+ P+IILMFIA+PS LLY MDE+ P+IT+K++GHQWYW+YEYSD+ +L FDSYMIP ++LE RLL+VDNRVV+P +RI+VT+ DVLHSW VPSLGVK DA PGRLNQ++ + R G+++GQCSEICG NH+FM Sbjct: 55 LLHGQTIEIIWTVLPAIILMFIALPSLRLLYLMDEINT-PSITLKSVGHQWYWSYEYSDF-----LNLEFDSYMIPTNELETNGFRLLDVDNRVVLPVNNQIRILVTATDVLHSWTVPSLGVKVDATPGRLNQLNFLINRPGLFFGQCSEICGANHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_SACEX (Cytochrome c oxidase subunit 2 OS=Saccharomyces exiguus GN=COX2 PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 9.166e-55 Identity = 98/169 (57.99%), Postives = 130/169 (76.92%), Query Frame = -3 Query: 263 YKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 766 Y +NP+ + + HG TIEI+W IFP++IL+ IA PSF LLY DEV+ PA+TIKAIG+QWYW YEY D+ + + +++ F+SY+IP+ LE GQLRLL+ D +VVP TH+R IVT+ADV+H +A+PSLG+K D PGRLNQ+S +QREGV+YG CSE+CG HA M Sbjct: 63 YSRNPMAYKYIKHGQTIEIIWKIFPAVILLTIAFPSFILLYLCDEVI-SPAMTIKAIGYQWYWKYEYFDFINDNGETIEFESYVIPDSLLEEGQLRLLDTDTSIVVPVDTHIRFIVTAADVIHDFAIPSLGIKVDGTPGRLNQVSTLIQREGVFYGMCSELCGIGHAQM 230
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_ANOGA (Cytochrome c oxidase subunit 2 OS=Anopheles gambiae GN=COII PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 9.166e-55 Identity = 98/159 (61.64%), Postives = 125/159 (78.62%), Query Frame = -3 Query: 263 IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 739 ++HG TIEI+WT+ P+IILMFIA PS LLY MDE+ P+IT+K+IGHQWYW+YEYSD+ +L FDSYM+P ++LE RLL+VDNRVV+P +RI+VT+ DVLHSW VPSLGVK DA PGRLNQ++ + R G+++GQCSEICG NH+FM Sbjct: 55 LLHGQTIEIIWTVLPAIILMFIAFPSLRLLYLMDEINT-PSITLKSIGHQWYWSYEYSDF-----LNLEFDSYMVPTNELETNGFRLLDVDNRVVLPMNNQIRILVTATDVLHSWTVPSLGVKVDATPGRLNQLNFLINRPGLFFGQCSEICGANHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_DROYA (Cytochrome c oxidase subunit 2 OS=Drosophila yakuba GN=mt:CoII PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.563e-54 Identity = 96/180 (53.33%), Postives = 136/180 (75.56%), Query Frame = -3 Query: 263 LRILVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 802 + +LV L + N + + ++HG IE++WTI P+IIL+FIA+PS LLY +DE+ +P++T+K+IGHQWYW+YEYSD+N+ + FDSYMIP ++L + RLL+VDNRV++P + +RI+VT+ADV+HSW VP+LGVK D PGRLNQ + + R G++YGQCSEICG NH+FM Sbjct: 34 ITVLVGYLMFMLFFNNYVNRFLLHGQLIEMIWTILPAIILLFIALPSLRLLYLLDEIN-EPSVTLKSIGHQWYWSYEYSDFNNIE-----FDSYMIPTNELAIDGFRLLDVDNRVILPMNSQIRILVTAADVIHSWTVPALGVKVDGTPGRLNQTNFFINRPGLFYGQCSEICGANHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_ASHGO (Cytochrome c oxidase subunit 2 OS=Ashbya gossypii GN=COX2 PE=3 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 2.042e-54 Identity = 97/169 (57.40%), Postives = 129/169 (76.33%), Query Frame = -3 Query: 263 YKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 766 YK NPI + + HG IEI+WTI P+IIL+ IA PSF LLY DEV+ PA+TIK IG QWYW YEYSD+ + + +++ ++SYMIPE+ LE GQLR+L+ D +V+P TH+R IVT+ DV+H +AVPSLG+K D PGRL+Q+S +QREG++YGQCSE+CG H+ M Sbjct: 62 YKNNPITYKYIKHGQMIEIIWTILPAIILLMIAFPSFILLYLCDEVI-SPAMTIKVIGLQWYWKYEYSDFINDNGETIEYESYMIPEELLEEGQLRMLDTDTSIVIPVDTHVRFIVTATDVIHDFAVPSLGIKIDTTPGRLSQVSTLIQREGIFYGQCSELCGAQHSAM 229
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_PISOC (Cytochrome c oxidase subunit 2 OS=Pisaster ochraceus GN=COII PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.667e-54 Identity = 97/158 (61.39%), Postives = 128/158 (81.01%), Query Frame = -3 Query: 263 VHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 736 + G ++E +WT+ P++IL+FIA+PS LLY +DEV +P +TIKAIGHQWYW+YEY+DY + L FDSYMIP +DL LG RLLEVDNR+ +P++T +R++VTS+DVLHSW VPSLG+K DAVPGRLNQ++ + R G++YGQCSEICG NH+FM Sbjct: 56 LEGQSLETIWTVIPAVILIFIALPSLQLLYLIDEVN-NPFLTIKAIGHQWYWSYEYADY-----RDLEFDSYMIPTNDLTLGNPRLLEVDNRLTLPSQTPIRVLVTSSDVLHSWTVPSLGIKMDAVPGRLNQVNFFISRCGLFYGQCSEICGANHSFM 207 The following BLAST results are available for this feature:
BLAST of CV712645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 312
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712645 ID=CV712645; Name=CV712645; organism=Citrus sinensis; type=EST; length=804bpback to top |