CV712645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_TAMMR (Cytochrome c oxidase subunit 2 OS=Tamias merriami GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.029e-53 Identity = 94/153 (61.44%), Postives = 124/153 (81.05%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+IIL+ IA+PS +LY MDE+ DP++T+K +GHQWYW+YEY+DY + L FDSYMIP DL G+LRLLEVDNRVV+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G+YYGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAIILILIALPSLRILYMMDEIN-DPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMIPTSDLNPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_TAMDO (Cytochrome c oxidase subunit 2 OS=Tamias dorsalis GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.029e-53 Identity = 94/153 (61.44%), Postives = 124/153 (81.05%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+IIL+ IA+PS +LY MDE+ DP++T+K +GHQWYW+YEY+DY + L FDSYMIP DL G+LRLLEVDNRVV+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G+YYGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAIILILIALPSLRILYMMDEIN-DPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMIPTSDLSPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_TAMCI (Cytochrome c oxidase subunit 2 OS=Tamias cinereicollis GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.029e-53 Identity = 94/153 (61.44%), Postives = 124/153 (81.05%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+IIL+ IA+PS +LY MDE+ DP++T+K +GHQWYW+YEY+DY + L FDSYMIP DL G+LRLLEVDNRVV+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G+YYGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAIILILIALPSLRILYMMDEIN-DPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMIPTSDLSPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_TAMCA (Cytochrome c oxidase subunit 2 OS=Tamias canipes GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.029e-53 Identity = 94/153 (61.44%), Postives = 124/153 (81.05%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+IIL+ IA+PS +LY MDE+ DP++T+K +GHQWYW+YEY+DY + L FDSYMIP DL G+LRLLEVDNRVV+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G+YYGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAIILILIALPSLRILYMMDEIN-DPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMIPTSDLSPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_TAMAM (Cytochrome c oxidase subunit 2 OS=Tamias amoenus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.029e-53 Identity = 94/153 (61.44%), Postives = 124/153 (81.05%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+IIL+ IA+PS +LY MDE+ DP++T+K +GHQWYW+YEY+DY + L FDSYMIP DL G+LRLLEVDNRVV+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G+YYGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAIILILIALPSLRILYMMDEIN-DPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMIPTSDLSPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_SUNME (Cytochrome c oxidase subunit 2 OS=Sundamys muelleri GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.029e-53 Identity = 93/153 (60.78%), Postives = 126/153 (82.35%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P++IL+ IA+PS +LY MDE+ +PA+T+K +GHQWYW+YEY+DY + L FDSYMIP +DL+ G+LRLLEVDNRVV+P + +R++V+S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G++YGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAVILILIALPSLRILYMMDEIN-NPALTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_HAPGR (Cytochrome c oxidase subunit 2 OS=Hapalemur griseus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.029e-53 Identity = 91/153 (59.48%), Postives = 122/153 (79.74%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+ IL+ IA+PS +LY MDE+ P++T+K +GHQWYW+YEY+DY ++L FDSYM+P DL+ G+LRLLEVDNR+V+P + +R++++S DVLHSWAVPSLGVK DA+PGRLNQ ++ R G+YYGQCSEICG NH+FM Sbjct: 61 VETVWTILPAAILILIALPSLRILYMMDEITT-PSLTLKTMGHQWYWSYEYTDY-----ENLCFDSYMVPSSDLKPGELRLLEVDNRIVLPTELSIRMLISSEDVLHSWAVPSLGVKTDAIPGRLNQATLMASRPGIYYGQCSEICGANHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_DUGDU (Cytochrome c oxidase subunit 2 OS=Dugong dugon GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.029e-53 Identity = 92/153 (60.13%), Postives = 125/153 (81.70%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P++IL+ IA+PS +LY MDE+ DP++T+K +GHQWYW+YEY+DY + L FDSYMIP +DLE GQLRLLEVDNRVV+P + +R++++S DVLHSWA+PS+G+K DA+PGRLNQ ++ R G++YGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAMILILIALPSLRILYMMDEIN-DPSLTVKTMGHQWYWSYEYTDY-----EDLTFDSYMIPTNDLEPGQLRLLEVDNRVVLPMEMPIRMLISSEDVLHSWAIPSMGLKTDAIPGRLNQATLMSSRPGLFYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_DROSU (Cytochrome c oxidase subunit 2 OS=Drosophila subobscura GN=mt:CoII PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.029e-53 Identity = 95/180 (52.78%), Postives = 134/180 (74.44%), Query Frame = -3 Query: 263 LRILVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 802 + +LV L + + + + ++HG IE++WTI P+IIL+FIA+PS LLY +DE+ +P+IT+K+IGHQWYW+YEYSD+N + FDSYMIP ++L RLL+VDNR+V+P + +RI+VT+ADV+HSW +P+LGVK D PGRLNQ + + R G++YGQCSEICG NH+FM Sbjct: 34 ITVLVGYLMVMLFFNSYVNRFLLHGQLIEMIWTILPAIILLFIAMPSLRLLYLLDEIN-EPSITLKSIGHQWYWSYEYSDFNDIE-----FDSYMIPTNELSNDGFRLLDVDNRIVLPMNSQIRILVTAADVIHSWTIPALGVKVDGTPGRLNQTNFFINRPGLFYGQCSEICGANHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_TAMQA (Cytochrome c oxidase subunit 2 OS=Tamias quadrimaculatus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.569e-53 Identity = 93/153 (60.78%), Postives = 124/153 (81.05%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+IIL+ IA+PS +LY MDE+ DP++T+K +GHQWYW+YEY+DY + L FDSYM+P DL G+LRLLEVDNRVV+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G+YYGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAIILILIALPSLRILYMMDEIN-DPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMVPTSDLSPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFM 207 The following BLAST results are available for this feature:
BLAST of CV712645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 312
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712645 ID=CV712645; Name=CV712645; organism=Citrus sinensis; type=EST; length=804bpback to top |