CV712645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_TAMBU (Cytochrome c oxidase subunit 2 OS=Tamias bulleri GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.569e-53 Identity = 93/153 (60.78%), Postives = 124/153 (81.05%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+IIL+ IA+PS +LY MDE+ DP++T+K +GHQWYW+YEY+DY + L FDSYMIP DL G+LRLLEVDNRVV+P + +R++++S DVLHSWA+PSLG+K DA+PGRLNQ +++ R G+YYGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAIILILIALPSLRILYMMDEIN-DPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMIPTSDLSPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_RHYIS (Cytochrome c oxidase subunit 2 OS=Rhynchomys isarogensis GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.569e-53 Identity = 92/153 (60.13%), Postives = 125/153 (81.70%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P++IL+ IA+PS +LY MDE+ +PA+T+K +GHQWYW+YEY+DY + L FDSYMIP +DL+ G LRLLEVDNR+V+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ ++S R G++YGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAVILILIALPSLRILYMMDEIN-NPALTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNDLKPGDLRLLEVDNRIVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVSSNRPGLFYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_MAXSU (Cytochrome c oxidase subunit 2 OS=Maxomys surifer GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.569e-53 Identity = 92/153 (60.13%), Postives = 126/153 (82.35%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P++IL+ IA+PS +LY MDE+ +PA+T+K +GHQWYW+YEY+DY + L FDSYMIP +DL+ G+LRLLEVDNRVV+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G++YGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAVILILIALPSLRILYMMDEIN-NPALTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_MAXBA (Cytochrome c oxidase subunit 2 OS=Maxomys bartelsii GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.569e-53 Identity = 92/153 (60.13%), Postives = 125/153 (81.70%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P++IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYMIP +DL+ G+LRLLEVDNRVV+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G+YYGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAVILILIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLYYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_HYLPR (Cytochrome c oxidase subunit 2 OS=Hylomyscus parvus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.569e-53 Identity = 91/153 (59.48%), Postives = 125/153 (81.70%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P++IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYM+P DDL+ G+LRLLEVDNRVV+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G++YGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAVILILIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMVPTDDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_BERBO (Cytochrome c oxidase subunit 2 OS=Berylmys bowersi GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.569e-53 Identity = 92/153 (60.13%), Postives = 126/153 (82.35%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P++IL+ IA+PS +LY MDE+ +PA+T+K +GHQWYW+YEY+DY + L FDSYMIP +DL+ G+LRLLEVDNRVV+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G++YGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAVILILIALPSLRILYMMDEIN-NPALTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_ANIIM (Cytochrome c oxidase subunit 2 OS=Anisomys imitator GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.569e-53 Identity = 92/153 (60.13%), Postives = 126/153 (82.35%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P++IL+ IA+PS +LY MDE+ +PA+T+K +GHQWYW+YEY+DY + L FDSYMIP +DL+ G+LRLLEVDNRVV+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ +++ R G++YGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAVILILIALPSLRILYMMDEIN-NPALTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_TINMA (Cytochrome c oxidase subunit 2 (Fragment) OS=Tinamus major GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.579e-53 Identity = 94/158 (59.49%), Postives = 123/158 (77.85%), Query Frame = -3 Query: 263 VHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 736 V +E++WTI P+I+L+ +A+PS +LY MDE+ +P +T+KAIGHQWYW+YEY+D+ + L FDSYMIP DL G RLLEVDNRVV+P ++ +R+I+T+ADVLHSWAVP+LGVK DA+PGRLNQ S R G++YGQCSEICG NH+FM Sbjct: 23 VDAQEVELIWTILPAIVLILLALPSLQILYMMDEID-EPDLTLKAIGHQWYWSYEYTDF-----KDLSFDSYMIPTPDLPTGYFRLLEVDNRVVIPMESPIRMIITAADVLHSWAVPTLGVKTDAIPGRLNQTSFITTRPGIFYGQCSEICGANHSFM 174
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_PSECP (Cytochrome c oxidase subunit 2 OS=Pseudalopex culpaeus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.579e-53 Identity = 93/153 (60.78%), Postives = 125/153 (81.70%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYMIP +L+LG+LRLLEVDNRVV+P + +R++++S DVLHSWAVPSLG+K DA+PGRLNQ ++ R G+YYGQCSEICG+NH+FM Sbjct: 61 VETVWTILPAIILILIALPSLRILYMMDEIN-NPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMIPTQELKLGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFM 207
BLAST of CV712645 vs. ExPASy Swiss-Prot
Match: COX2_PIG (Cytochrome c oxidase subunit 2 OS=Sus scrofa GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.579e-53 Identity = 94/153 (61.44%), Postives = 124/153 (81.05%), Query Frame = -3 Query: 263 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFM 721 +E +WTI P+IIL+ IA+PS +LY MDE+ +PA+T+K +GHQWYW+YEY+DY + L FDSYMIP DL+ G++RLLEVDNRVV+P + +R++V+S DVLHSWAVPSLG+K DA+PGRLNQ ++ R G+YYGQCSEICG+NH+FM Sbjct: 61 VETIWTILPAIILILIALPSLRILYMMDEIN-NPALTVKTMGHQWYWSYEYTDY-----EDLTFDSYMIPTSDLKPGEMRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFM 207 The following BLAST results are available for this feature:
BLAST of CV712645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 312
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712645 ID=CV712645; Name=CV712645; organism=Citrus sinensis; type=EST; length=804bpback to top |