CV712625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712625 vs. ExPASy Swiss-Prot
Match: RS3_THESM (30S ribosomal protein S3P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps3p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16 Identity = 52/142 (36.62%), Postives = 74/142 (52.11%), Query Frame = 2 Query: 2 KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 421 +F + ++ E++ N A QA L L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GVLG+KV IM P LPD + I P++EEV Sbjct: 72 RFNLENPQIEVEEIKNSYFNAKVQATRLAQALERGVHFRRAAYAAIRAIMSNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLVSRGYAQALLKLGVLGVKVSIM---------PPDARLPDEIEIVEKPIEEEV 204
BLAST of CV712625 vs. ExPASy Swiss-Prot
Match: RS3_PYRFU (30S ribosomal protein S3P OS=Pyrococcus furiosus GN=rps3p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16 Identity = 53/142 (37.32%), Postives = 75/142 (52.82%), Query Frame = 2 Query: 2 KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 421 +F + ++ E++ N L A QA L L G+ RRA Y LR IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM P LPD + I P++EEV Sbjct: 72 QFGLENPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------PPGARLPDEIEIIEKPVEEEV 204
BLAST of CV712625 vs. ExPASy Swiss-Prot
Match: RS3_THEON (30S ribosomal protein S3P OS=Thermococcus onnurineus (strain NA1) GN=rps3p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16 Identity = 50/141 (35.46%), Postives = 74/141 (52.48%), Query Frame = 2 Query: 2 KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEE 418 +F + ++ E++ N L A QA L L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM P LPD + + P++EE Sbjct: 72 QFGLENPQIEVEEIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIMRNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVSIM---------PPDAKLPDEIEVIEKPIQEE 203
BLAST of CV712625 vs. ExPASy Swiss-Prot
Match: RS3_THEGJ (30S ribosomal protein S3P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps3p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.882e-16 Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 2 Query: 2 KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 418 +F + ++ E++ N L A QA L L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM P LPD + + + EE Sbjct: 72 QFGLENPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------PPDARLPDEIEVKEIVEE 201
BLAST of CV712625 vs. ExPASy Swiss-Prot
Match: RS3_PYRAB (30S ribosomal protein S3P OS=Pyrococcus abyssi GN=rps3p PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16 Identity = 50/142 (35.21%), Postives = 75/142 (52.82%), Query Frame = 2 Query: 2 KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 421 +F + ++ +++ N L A QA + L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM P LPD + I P++EEV Sbjct: 72 QFGLENPQIDVQEIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIMSNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------PPDARLPDEIEIIEKPVEEEV 204
BLAST of CV712625 vs. ExPASy Swiss-Prot
Match: RS3_PYRKO (30S ribosomal protein S3P OS=Pyrococcus kodakaraensis GN=rps3p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 49/139 (35.25%), Postives = 71/139 (51.08%), Query Frame = 2 Query: 2 KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 418 +F + ++ E++ N L A QA L L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + L+ GV+G+KV IM P LPD + I + EE Sbjct: 72 QFGLENPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSRGYAQAQLKLGVIGVKVSIM---------PPDAKLPDEIEIKEIVEE 201
BLAST of CV712625 vs. ExPASy Swiss-Prot
Match: RS3_THEPD (30S ribosomal protein S3P OS=Thermofilum pendens (strain Hrk 5) GN=rps3p PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 2 Query: 38 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 337 +V N+ L A A + L+ G+ RRA L IM +GA+G E+++SGKL +QR ++ KF GY+ SG+P E +D A+ HVLL+ G+ G+KV+IM Sbjct: 85 EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIM 184
BLAST of CV712625 vs. ExPASy Swiss-Prot
Match: RS3_PYRHO (30S ribosomal protein S3P OS=Pyrococcus horikoshii GN=rps3p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 50/142 (35.21%), Postives = 74/142 (52.11%), Query Frame = 2 Query: 2 KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 421 +F + ++ +++ N L A QA + L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM P LPD + I P +EEV Sbjct: 72 QFGLENPQIDVQEIKNPYLNAKVQAVRIAQALERGIHFRRAAYSAMRAIMNNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------PPDARLPDEIEIVEKPAEEEV 204
BLAST of CV712625 vs. ExPASy Swiss-Prot
Match: RS3_METHJ (30S ribosomal protein S3P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps3p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14 Identity = 42/107 (39.25%), Postives = 63/107 (58.88%), Query Frame = 2 Query: 17 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 337 S ++ ++V+N L A AE L L G R+A LR IM+SGA GCEV++SGKL R + KF +GY+ SG PVN +D + + GV+G++V+++ Sbjct: 77 SPQIEVQQVDNPNLNAQIMAERLASALERGWYFRKAGSSTLRRIMDSGALGCEVVISGKLTGARGRVQKFTEGYIKHSGDPVNTLVDKGYAVAIKKLGVIGVQVRLI 183
BLAST of CV712625 vs. ExPASy Swiss-Prot
Match: RS3_METLZ (30S ribosomal protein S3P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps3p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 2 Query: 17 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELPV 463 S ++ ++V N L A AE L L G R+A V+R +M+SGA GCEVI++GKL RA+ KF +GY+ SG+P ++ + + G++G++VKI+ P LPD I APA A +E + Sbjct: 77 SPQVEVQQVANPNLNAQIMAERLANALERGWYFRKAGTSVIRRVMDSGALGCEVIIAGKLTGARARVQKFVEGYIKHSGEPSESIVEKGYATAIKKLGIIGVQVKIV---------PPGAKLPDQFEI-----RADAAPAPARVVETDI 211 The following BLAST results are available for this feature:
BLAST of CV712625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712625 ID=CV712625; Name=CV712625; organism=Citrus sinensis; type=EST; length=698bpback to top |