CV712575

Overview
NameCV712575
Unique NameCV712575
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712575 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.289e-31
Identity = 63/130 (48.46%), Postives = 89/130 (68.46%), Query Frame = 1
Query:   10 FDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAP--FDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 393
            FD DGDG I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ MK    + ++R+AF+V DKD  GF+S ++LRH++T++GEKL   E DE IRE D+  DG++ YE+F+  M +K
Sbjct:   20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149          
BLAST of CV712575 vs. ExPASy Swiss-Prot
Match: CALM_PLEOS (Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 1.289e-31
Identity = 63/130 (48.46%), Postives = 91/130 (70.00%), Query Frame = 1
Query:   10 FDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 393
            FD DGDG I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ M+    + ++++AFKV DKD  G++S ++LRH++T++GEKL  +E DE IRE DV  DG+I YE+F+  M++K
Sbjct:   20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADVDGDGQINYEEFVKMMLSK 149          
BLAST of CV712575 vs. ExPASy Swiss-Prot
Match: CALM_PHYPO (Calmodulin OS=Physarum polycephalum PE=2 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 1.289e-31
Identity = 63/130 (48.46%), Postives = 89/130 (68.46%), Query Frame = 1
Query:   10 FDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 393
            FD DGDG I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ M     + ++R+AFKV DKD  GF+S ++LRH++T++GEKL   E DE IRE DV  DG++ Y++F+  M++K
Sbjct:   20 FDKDGDGNITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMADTDTEEEIREAFKVFDKDGNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQVNYDEFVKMMLSK 149          
BLAST of CV712575 vs. ExPASy Swiss-Prot
Match: CALM_EPIAK (Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 1.289e-31
Identity = 63/130 (48.46%), Postives = 89/130 (68.46%), Query Frame = 1
Query:   10 FDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 393
            FD DGDG I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ MK    + ++R+AF+V DKD  G++S ++LRH++T++GEKL   E DE IRE D+  DG++ YE+F+  M AK
Sbjct:   20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQIMTAK 149          
BLAST of CV712575 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSJ (Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CAM3 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.289e-31
Identity = 65/130 (50.00%), Postives = 91/130 (70.00%), Query Frame = 1
Query:   10 FDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 393
            FD DGDG I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL+LMA+ MK    + +L++AF+V DKD  GF+S ++LRH++T++GEKL   E +E IRE DV  DG+I Y++F+  M+AK
Sbjct:   20 FDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYDEFVKVMMAK 149          
BLAST of CV712575 vs. ExPASy Swiss-Prot
Match: CALM_SACJA (Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.683e-31
Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 1
Query:   10 FDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 393
            FD DGDG I   ELG +MRSLG NPT+A+L  +I+E         DFP FL +MA+ MK    + ++ +AFKV DKD  GF+S ++LRHI+T++GEKL   E DE IRE D+  DG+I YE+F+  M++K
Sbjct:   20 FDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149          
BLAST of CV712575 vs. ExPASy Swiss-Prot
Match: CALM_PLECO (Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 1.683e-31
Identity = 62/130 (47.69%), Postives = 91/130 (70.00%), Query Frame = 1
Query:   10 FDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 393
            FD DGDG I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ M+    + ++++AFKV DKD  G++S ++LRH++T++GEKL  +E DE IRE D+  DG+I YE+F+  M++K
Sbjct:   20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADIDGDGQINYEEFVKMMLSK 149          
BLAST of CV712575 vs. ExPASy Swiss-Prot
Match: CALM_PARTE (Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 1.683e-31
Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 1
Query:   10 FDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 393
            FD DGDG I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL LMA+ MK +  + +L +AFKV D+D  G +S ++LRH++T++GEKL   E DE IRE D+  DG I YE+F+  MV+K
Sbjct:   20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK 149          
BLAST of CV712575 vs. ExPASy Swiss-Prot
Match: CALM_CIOIN (Calmodulin OS=Ciona intestinalis PE=2 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 1.683e-31
Identity = 64/130 (49.23%), Postives = 88/130 (67.69%), Query Frame = 1
Query:   10 FDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 393
            FD DGDG I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ MK    + ++R+AF+V DKD  GF+S ++LRH++T++GEKL   E DE IRE DV  DG++ YE+F+  M  K
Sbjct:   20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVNMMTNK 149          
BLAST of CV712575 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 2.872e-31
Identity = 66/130 (50.77%), Postives = 87/130 (66.92%), Query Frame = 1
Query:   10 FDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 393
            FD DGDG I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL LMA+ MK    + +L +AFKV D+D  G +S ++LRH++T++GEKL   E DE IRE DV  DG I YE+F+  M+AK
Sbjct:   20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELVEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHINYEEFVRMMMAK 149          
The following BLAST results are available for this feature:
BLAST of CV712575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
CALM_RENRE1.289e-3148.46Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_PLEOS1.289e-3148.46Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=... [more]
CALM_PHYPO1.289e-3148.46Calmodulin OS=Physarum polycephalum PE=2 SV=3[more]
CALM_EPIAK1.289e-3148.46Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3[more]
CALM3_ORYSJ1.289e-3150.00Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM_SACJA1.683e-3150.00Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1[more]
CALM_PLECO1.683e-3147.69Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 S... [more]
CALM_PARTE1.683e-3150.00Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 S... [more]
CALM_CIOIN1.683e-3149.23Calmodulin OS=Ciona intestinalis PE=2 SV=3[more]
CALM_STYLE2.872e-3150.77Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001J12_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001J12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712575 ID=CV712575; Name=CV712575; organism=Citrus sinensis; type=EST; length=568bp
TCACATTGGTTCGACACAGACGGTGACGGAAAGATCGCGCCGTCTGAGCT
AGGGATCCTAATGAGGTCACTTGGGGGAAACCCGACCCAGGCCCAGCTCA
AATCCATAATCTCCGAGGAAAAACTAACGGCACCCTTTGACTTCCCGCGG
TTCCTTGACCTGATGGCCAAGCACATGAAACCTGAGCCCTTCGATCGCCA
GTTGCGTGACGCCTTCAAAGTGCTGGATAAAGATAACACCGGCTTCGTCT
CCGTCTCCGATCTACGACACATTCTCACTTCTATTGGGGAGAAGCTGGAG
CCTTCCGAGTTTGATGAGTGGATCCGGGAAGTGGATGTCGGGTCCGACGG
CAAGATCAAGTACGAGGATTTTATTGCCAGGATGGTGGCCAAGTGACCAG
TGATTGGATCTTCAACTTTAAGATATGATTAATGGGTGTCTGTTTATTTT
TAATGTTTTCTGCAATTAATGTTGAGTTTTGTGTACCTTTCTGTTTTAAT
GTGATGGATTTTGATGGTATTTCTTGAATTGTTGAAAGTAATGCTGACCT
TTTGTTAGGTATTTTCCT
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