CV712560

Overview
NameCV712560
Unique NameCV712560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712560 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.186e-37
Identity = 86/183 (46.99%), Postives = 117/183 (63.93%), Query Frame = -1
Query:  281 GLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 826
            GLVPIVEPE+L+DG HDI++C +V E + A  +K + D+ V+L+G LLKP MVTPG++   K  P  +AE+T++ L    P  VP ++FLSGGQSE E+T NLNAMNQ  +  PW +SFS+ RAL  + LK W      VQ  + A   R KANS+A  G Y    + G+ AA+ ++ K   Y
Sbjct:  195 GLVPIVEPEVLLDGEHDIDRCLEVQEAIWAETFKYMADNKVMLQGILLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAP-PVPGIMFLSGGQSELESTLNLNAMNQ--SPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTE-GKEAAQGMYEKGKGY 372          
BLAST of CV712560 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.186e-37
Identity = 82/167 (49.10%), Postives = 111/167 (66.47%), Query Frame = -1
Query:  338 ENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 832
            E GLVP+VEPE+++DG HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G     + + E +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK WA     N  KAQ     R K N  A LG +KG
Sbjct:  169 EQGLVPMVEPEVIMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CV712560 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.200e-36
Identity = 80/167 (47.90%), Postives = 114/167 (68.26%), Query Frame = -1
Query:  338 ENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 832
            E GLVP+VEPE+++DG HDI+   +VTE  L + + AL + +V+LEGT+LK +MV PG++   + + + +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQ     PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  169 EQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQF-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CV712560 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.491e-36
Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = -1
Query:  338 ENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 832
            E GLVP+VEPE+++DG HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G     + + E +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK W+     N  KAQ     R K N  A LG +KG
Sbjct:  169 EQGLVPMVEPEVIMDGDHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CV712560 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 3.612e-33
Identity = 80/172 (46.51%), Postives = 111/172 (64.53%), Query Frame = -1
Query:  320 ENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGS-EAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 832
            +NGL PI+EPEI++DG H I++   V ++V A  +  L +++VLLEG+ LKP+MV PG+  A K  PE +A++ ++ L R     VP ++ LSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ + LK W   +ENV+    A     K+NS A LG Y G+ +  E
Sbjct:  215 DNGLDPILEPEIMLDGEHGIDRTFRVAQQVWAEVFFNLAENNVLLEGSSLKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQ--SPNPWHVSFSYARALQNTCLKTWVEGQENVKAQDFAC---AKSNSLAQLGKYTGEGESEE 381          
BLAST of CV712560 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.047e-33
Identity = 73/137 (53.28%), Postives = 91/137 (66.42%), Query Frame = -1
Query:  281 LLKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 688
            LLKPNMVTPG   P K +PE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N     +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A LG Y+G       A +SL+V ++ Y
Sbjct:    1 LLKPNMVTPGHSCPTKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of CV712560 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.191e-30
Identity = 67/100 (67.00%), Postives = 77/100 (77.00%), Query Frame = -1
Query:  416 HHVLLEGTLLKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 712
            H++ LEGTLLKPNMVT G   PK  TPE IA  TV AL RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:    1 HNMFLEGTLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
BLAST of CV712560 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.207e-29
Identity = 64/150 (42.67%), Postives = 94/150 (62.67%), Query Frame = -1
Query:  386 ENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFL 832
            +NGLVPIVEPE+ ++G + + +  +VT ++L+   K LN   V + G L+K + VT G  +  K TP+ +A  T+RAL  T+P  +P +VFLSGG   E+A   LNA+N  +  + WSLSFSF RAL    L+ W G + N+++AQ   L
Sbjct:  171 KNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILL 320          
The following BLAST results are available for this feature:
BLAST of CV712560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALFC_CHLRE9.186e-3746.99Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF1_XANAC9.186e-3749.10Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFT1.200e-3647.90Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP3.491e-3648.50Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_SPIOL3.612e-3346.51Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALDOC_CHICK8.047e-3353.28Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALF_LYMST2.191e-3067.00Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]
ALF_ENCCU9.207e-2942.67Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001J03_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001J03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712560 ID=CV712560; Name=CV712560; organism=Citrus sinensis; type=EST; length=832bp
TTTTTTAGCACAGAGAACATTATCAATTATGTGACAAAATCACAGAAATT
TAGCGCCATTAGGGGAAAAGGAAAAAAAAAACAAAAACAAAAGCATAAAC
AGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAAGC
TTTTTATTGCTCCACCTAATATGAAAAAGCCCTAAAACTATGAATGAGAA
TGTGCCAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATAAA
GCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACAT
GGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAGTA
CCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTG
GGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCT
GCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCGTC
TTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTCCTCACTCTG
CCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTT
GCAGGGCCCGGACAGTGTGTTCAGCAATCACCTCCGGTGTAACTTTGGGA
GCTTCAGATCCAGGGGTCACCATGTTGGGCTTCAAAAGGGTACCCTCAAG
AAGGACATGGTGGTCATTCAGAGCCTTGTAGCATGCAGCAAGAACACGCT
CGGTCACATCAGCACACTTGTTGATGTCATGGGGACCGTCAACAAGGATC
TCAGGTTCAACAATGGGAACAAGGCCATTCTC
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