CV712551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_MICAN (Ribosome-recycling factor OS=Microcystis aeruginosa (strain NIES-843) GN=frr PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.758e-42 Identity = 81/149 (54.36%), Postives = 119/149 (79.87%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 +V+ +M++T++ + FN++RTGR+N ++LD+I VEYYG LKS+A I+TPD++++ IQP+D++S+ +IEKAI SD+G+TP+NDG+ IRL +P LTS+RRKEL K+ AK AEEGKVA+RNIRRDA+ A K +K ++SED +DL Sbjct: 5 EVQDQMQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTIAIQPFDRTSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKLAAKLAEEGKVAIRNIRRDAIDAIRKREKGHEISEDESRDL 153
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_PROM4 (Ribosome-recycling factor OS=Prochlorococcus marinus (strain MIT 9211) GN=frr PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.295e-42 Identity = 79/148 (53.38%), Postives = 115/148 (77.70%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 +++ M ++++ + NFN++RTGR+N ++LD++ VEYYG+ LKS+A I+TPDS ++ IQP+D SSL IEK+I SDLG TPNNDG++IR+ +P LT ERRKE K+ +K AEEGKVA+RNIRRDA++ +K +KE ++SED +D Sbjct: 5 ELEQNMRKSVEAAQRNFNTIRTGRANTSLLDRLTVEYYGADTPLKSLATISTPDSQTISIQPFDLSSLVLIEKSIAMSDLGFTPNNDGKIIRINIPPLTEERRKEFCKLASKYAEEGKVALRNIRRDAIERIKKSEKESEISEDQSRD 152
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_SYNPX (Ribosome-recycling factor OS=Synechococcus sp. (strain WH8102) GN=frr PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.114e-42 Identity = 79/148 (53.38%), Postives = 114/148 (77.03%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 D++A M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++ IQP+D S+L SIEKAI S+LG TPNNDG++IR+ +P LT ERRKE K+ +K AEEGKVA+RN+RRDA+ +K +K+ SED +D Sbjct: 5 DLEASMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQIQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKVALRNLRRDAIDKVKKQEKDGDFSEDQSRD 152
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_CYAA5 (Ribosome-recycling factor OS=Cyanothece sp. (strain ATCC 51142) GN=frr PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.114e-42 Identity = 78/149 (52.35%), Postives = 114/149 (76.51%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 D+K M+++++ + +FN++RTGR+N ++LD++ VEYYG+ L +A I+TPD+++++IQPYDK S+ IEKAI SD+G+TPNNDG+VIRL +P LT ERRK+L K+ +K AEEGKVA+RNIRRDA+ K +K +SED + L Sbjct: 5 DLKENMQKSVEATQRSFNTIRTGRANASILDRVTVEYYGTETPLYQLANISTPDATTIMIQPYDKGSMGQIEKAIQMSDVGLTPNNDGQVIRLNIPPLTEERRKDLVKLASKMAEEGKVAIRNIRRDAIDDVRKQEKNSDISEDESRGL 153
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_SYNPW (Ribosome-recycling factor OS=Synechococcus sp. (strain WH7803) GN=frr PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.139e-41 Identity = 79/148 (53.38%), Postives = 114/148 (77.03%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 D+++ M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++ IQP+D S+L IEKAI S+LG TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGKVA+RN+RRDA+ +K +KE + SED +D Sbjct: 5 DLESSMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQIQPFDISALALIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVALRNLRRDAIDKIKKQEKEGEFSEDQSRD 152
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_SYNS9 (Ribosome-recycling factor OS=Synechococcus sp. (strain CC9902) GN=frr PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.488e-41 Identity = 79/148 (53.38%), Postives = 113/148 (76.35%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 D++A M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++ IQP+D S L +IEKAI S+LG TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGKVA+RN+RRDA+ +K +K+ SED +D Sbjct: 5 DLEASMRKSLEATQRNFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLSTPDSQTIQIQPFDISGLAAIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKMASKYAEEGKVALRNLRRDAIDKVKKQEKDGDFSEDQSRD 152
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_SYNP2 (Ribosome-recycling factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=frr PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 7.384e-41 Identity = 79/149 (53.02%), Postives = 112/149 (75.17%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 +++ M++TI+ + +FN++RTGR++ ++LD+I VEYYG+ LKS+A I+TPDSS+++IQP+D+ SL +E+AI SDLG+TPNNDG IRL +P LT ERR+EL K K AEEGKVA+RNIRRDA+ K +K +SED + L Sbjct: 5 ELRENMQKTIEATQRSFNTLRTGRASASLLDRITVEYYGAETPLKSLASISTPDSSTIMIQPFDRGSLSDVERAISMSDLGLTPNNDGTNIRLNIPPLTKERRQELVKTAGKLAEEGKVALRNIRRDAIDDVRKQEKNSDISEDESRSL 153
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_ALKMQ (Ribosome-recycling factor OS=Alkaliphilus metalliredigens (strain QYMF) GN=frr PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.645e-40 Identity = 75/146 (51.37%), Postives = 116/146 (79.45%), Query Frame = 2 Query: 347 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 ++ +M +T+ +++ +FNS+R G++NP+MLD+I V+YYGS LK +A ++ P+ L+IQPYD S + IEKA++ SDLG+ P+NDG++IRL +PQLT ERRKEL+KVV + AEEG+VA+RN RRDA + +K++K+ +L+ED++K Sbjct: 9 LEEKMTKTLGVLKDDFNSIRAGKANPSMLDRITVDYYGSITPLKQVASVSAPEPRLLIIQPYDPSVINGIEKALMMSDLGLNPSNDGKIIRLNIPQLTEERRKELTKVVKRVAEEGRVALRNGRRDANEQLKKMEKDSELTEDDLK 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_PROMP (Ribosome-recycling factor OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=frr PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.148e-40 Identity = 79/148 (53.38%), Postives = 116/148 (78.38%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 ++++ M ++++ + NFN++RTGR+N ++LD+I VEYYG+ +KS+A I+T DS ++ IQP+D SSL++IEKAI SDLG+TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGKVA+RNIRRDA+ +K +KE +S+D +D Sbjct: 5 EIQSSMNKSVEATQRNFNTIRTGRANASLLDRISVEYYGAETPIKSLASISTIDSQTISIQPFDISSLQTIEKAISVSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVALRNIRRDAVDKEKKDEKEGLISKDVSRD 152
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_SYNWW (Ribosome-recycling factor OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=frr PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.806e-40 Identity = 81/147 (55.10%), Postives = 112/147 (76.19%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 D + RM++TI+ +R + S+R GR+NPAML+KI V+YYG P + +A I P++ L+IQP+DK+ + SIEKAI+ SDLG+ P+NDG VIRL +PQLT ERRKEL KV+ K+AEE +VAVRNIRRD+ + + +KEK +SED+ K Sbjct: 8 DTEERMKKTIEHLRKDLASLRAGRANPAMLEKIMVDYYGQPTPINQLANITVPEARLLVIQPWDKTIIASIEKAIMKSDLGINPSNDGNVIRLVIPQLTEERRKELVKVLRKRAEEARVAVRNIRRDSNELLKSGEKEKLISEDDNK 154 The following BLAST results are available for this feature:
BLAST of CV712551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712551 ID=CV712551; Name=CV712551; organism=Citrus sinensis; type=EST; length=795bpback to top |