CV712551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_CALS8 (Ribosome-recycling factor OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=frr PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.953e-37 Identity = 71/144 (49.31%), Postives = 106/144 (73.61%), Query Frame = 2 Query: 356 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 +M++ I+ ++ F +VR GR+NP +LDK+ V+YYG P + +A I P++ ++IQP++ LK IEKAI +DLG+ P NDG+VIRL P+LT ERRKEL K V K AE+ KVA+RNIRR+A+ Y+K++K +++ED++KD Sbjct: 11 KMKKAIETLKEEFATVRAGRANPHILDKVMVDYYGVPTPIPQLASITVPEARMIVIQPWEARMLKEIEKAIQKADLGVNPANDGKVIRLIFPELTEERRKELVKQVKKMAEDAKVAIRNIRREAIDEYKKMKKNNEITEDDLKD 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRMU (Ribosome-recycling factor OS=Streptococcus mutans GN=frr PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.449e-37 Identity = 76/147 (51.70%), Postives = 102/147 (69.39%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 K R E++ + F S+R GR+N ++LD+IEVEYYG P L +A I P++ LL+ P+DKSSLK IE AI +SD+G+ P NDG VIRL +P LT E RKEL+K V K E KVA+RNIRRDA+ +K +K K+++ED +K L Sbjct: 10 KERFEQSHQSLAREFGSIRAGRANASLLDRIEVEYYGVPTPLNQLASITVPEARVLLVSPFDKSSLKDIEHAINASDIGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKVAIRNIRRDAMDEAKKQEKIKEITEDELKSL 156
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_EUBR3 (Ribosome-recycling factor OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=frr PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.449e-37 Identity = 70/145 (48.28%), Postives = 107/145 (73.79%), Query Frame = 2 Query: 356 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 +ME+T++ + + +R GR+NP +LDK+ V+YYG+P ++S+A ++ P+ + IQP++ S +K IEKAI SD+G+ P NDG++IRL P+LT ERRK+L+K + K+ EE KVAVRNIRRDA+ + +K KE+ +SED +K L Sbjct: 11 KMEKTLNNLEEEYAGIRAGRANPHILDKLRVDYYGTPSPIQSVANVSVPEPRMIQIQPWEASMVKEIEKAINCSDIGINPTNDGKLIRLVFPELTEERRKDLAKDIKKKGEEAKVAVRNIRRDAIDSIKKTGKEEGISEDEIKGL 155
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_CLOD6 (Ribosome-recycling factor OS=Clostridium difficile (strain 630) GN=frr PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.449e-37 Identity = 74/146 (50.68%), Postives = 106/146 (72.60%), Query Frame = 2 Query: 347 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 ++ +M TID ++ F ++R GR+N MLDKI V+YYG+P + I I+ P+ L+I P+DKS++ IEKAI +SDLG+ P+NDGEVIRL++P LT ERRKEL+K +K AEE KV +RN RRDA + +K++K +L+ED +K Sbjct: 9 LEEKMNGTIDALKFEFGTIRAGRANAQMLDKIRVDYYGTPTPINQIGAISVPEPRILMISPWDKSAMHEIEKAIANSDLGLNPSNDGEVIRLSVPALTEERRKELAKKASKAAEEFKVRIRNERRDANEKIKKMEKGGELTEDELK 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_LISMO (Ribosome-recycling factor OS=Listeria monocytogenes GN=frr PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.103e-36 Identity = 73/145 (50.34%), Postives = 106/145 (73.10%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KVAVRNIRR+A + +KL+K ++ED+++ Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLR 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_LISMH (Ribosome-recycling factor OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=frr PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.103e-36 Identity = 73/145 (50.34%), Postives = 106/145 (73.10%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KVAVRNIRR+A + +KL+K ++ED+++ Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKSGDITEDDLR 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_LISMF (Ribosome-recycling factor OS=Listeria monocytogenes serotype 4b (strain F2365) GN=frr PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.103e-36 Identity = 73/145 (50.34%), Postives = 106/145 (73.10%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KVAVRNIRR+A + +KL+K ++ED+++ Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLR 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_LISMC (Ribosome-recycling factor OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=frr PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.103e-36 Identity = 73/145 (50.34%), Postives = 106/145 (73.10%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KVAVRNIRR+A + +KL+K ++ED+++ Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLR 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_BACSU (Ribosome-recycling factor OS=Bacillus subtilis GN=frr PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 1.103e-36 Identity = 73/145 (50.34%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 K +ME+ I + +VR GR+NP++LDK+ VEYYG+ L ++ IN P++ L+I PYDK+++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL KVV K AEE KVAVRN+RRDA +KL+K ++ED ++ Sbjct: 10 KEKMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVITPYDKTAIGDIEKAILKADLGLTPTSDGNMIRIAIPALTEERRKELVKVVKKYAEEAKVAVRNVRRDANDDLKKLEKNGDITEDELR 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRU0 (Ribosome-recycling factor OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=frr PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.441e-36 Identity = 74/145 (51.03%), Postives = 103/145 (71.03%), Query Frame = 2 Query: 356 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 R E++ + + S+R GR+N ++LD+I+VEYYG P L +A I P++ LLI P+DKSS+K IE+AI +SDLG+TP NDG VIRL +P LT E RKEL+K V K E K+A+RNIRRDA+ +K +K K+++ED +K L Sbjct: 12 RFEQSFQSLSREYASIRAGRANASLLDRIQVEYYGVPTPLNQLASITVPEARVLLISPFDKSSIKDIERAINASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENQKIAIRNIRRDAMDEAKKQEKNKEITEDELKAL 156 The following BLAST results are available for this feature:
BLAST of CV712551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712551 ID=CV712551; Name=CV712551; organism=Citrus sinensis; type=EST; length=795bpback to top |