CV712551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_RHOBA (Ribosome-recycling factor OS=Rhodopirellula baltica GN=frr PE=3 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.441e-36 Identity = 70/145 (48.28%), Postives = 106/145 (73.10%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDN 778 D + RM++ + +++ N + +RTGR+NP ++D I+VE YGS LK +A I TP+ +LI+PYD +++K IEKAIV+ DLG+ P NDG VIRL +P L+ E RK++ + + AEE KV++RNIRRDA KA E +K+K+++ED+ Sbjct: 9 DAEERMDKAVSVLQNNLSGIRTGRANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQILIRPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAKVSIRNIRRDANKAAETAEKDKEMTEDD 153
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_LACDB (Ribosome-recycling factor OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=frr PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.441e-36 Identity = 74/147 (50.34%), Postives = 108/147 (73.47%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 K M ++I++ ++N +VR G +N ++LD++ VEYYG P L +A I P+ L+I PYDKSSL IE AI++SDLG+TP NDG VIRL +PQLT ERR+E++K V K AEE K+AVRN+R++A+KA +K +K+ +++ED + L Sbjct: 10 KRNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLMITPYDKSSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAKIAVRNVRQEAMKALKKQEKDGEITEDEERRL 156
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_CARHZ (Ribosome-recycling factor OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=frr PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.441e-36 Identity = 73/147 (49.66%), Postives = 108/147 (73.47%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 + + M++ I++++ F ++R GR+ PA+L+K+ VEYYG+ + + +A I+ P+ L+IQP+DK +L +IEKAI+ SDLG+TP NDG VIRL +P LT ERR+EL KV K+AEE +VA+RNIRRDA + L+K+K +SED K Sbjct: 8 EAQDHMQKAIEVLKKEFATMRVGRATPALLEKVVVEYYGTQMPVNQLATISAPEPRLLVIQPWDKGALGAIEKAILKSDLGITPTNDGSVIRLAIPPLTQERRQELVKVARKKAEEARVAIRNIRRDANDRIKDLEKDKVISEDEGK 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_BACA2 (Ribosome-recycling factor OS=Bacillus amyloliquefaciens (strain FZB42) GN=frr PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.441e-36 Identity = 72/145 (49.66%), Postives = 103/145 (71.03%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 K RME+ + SVR GR+NP++LDK+ VEYYG+ L ++ IN P++ L++ PYDK+++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL KVV K AEE KVAVRN+RRD+ +KL+K ++ED ++ Sbjct: 10 KERMEKAVAAYSRELASVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVVTPYDKTAIGDIEKAILKADLGVTPTSDGTIIRIAIPALTEERRKELVKVVKKYAEEAKVAVRNVRRDSNDDLKKLEKNGDITEDELR 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_SYNAS (Ribosome-recycling factor OS=Syntrophus aciditrophicus (strain SB) GN=frr PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.882e-36 Identity = 72/148 (48.65%), Postives = 106/148 (71.62%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 ++K ME+ + + +FN VRTGR++ ++LD I+ +YYG+P L +A ++ P+S +LI P+D S+L +IEKAI SDLG+ PNNDG+VIR+++P LT RRKEL KVV K AEE KV +RN RRDA + ++ ++K +SED + D Sbjct: 8 ELKQNMEKGLQALEKSFNKVRTGRASISLLDGIKADYYGTPTPLNQVATLSVPESRQILISPWDTSALNAIEKAIQKSDLGLVPNNDGKVIRISIPPLTEARRKELVKVVRKMAEECKVKLRNARRDANEEFKSMKKNNDISEDQMHD 155
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_LISIN (Ribosome-recycling factor OS=Listeria innocua GN=frr PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.882e-36 Identity = 73/145 (50.34%), Postives = 106/145 (73.10%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KVAVRNIRR+A + +KL+K ++ED+++ Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEDLKKLEKNGDITEDDLR 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_KOCRD (Ribosome-recycling factor OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=frr PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.882e-36 Identity = 72/147 (48.98%), Postives = 104/147 (70.75%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 D RM + +D +T+F++VRTGR+NPA+ + V YYG+P L+ +A TP++ +LLI PYD+S+L IEKA+ SD+G P NDG VIR+ +P+LT ERRKE K+V +AE+ +V+VRN+RR A +A EKL K+ + ED+ K Sbjct: 8 DATTRMGKAVDAAKTDFSTVRTGRANPALFSSLLVAYYGTPTPLQQLASFQTPEARTLLITPYDRSALNDIEKALRDSDIGANPANDGNVIRVVMPELTEERRKEYVKIVHGKAEDARVSVRNVRRHAKEAIEKLVKDGDVGEDDGK 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_DESRM (Ribosome-recycling factor OS=Desulfotomaculum reducens (strain MI-1) GN=frr PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.882e-36 Identity = 74/142 (52.11%), Postives = 106/142 (74.65%), Query Frame = 2 Query: 359 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 M++++D+VR F S+R GR+ P++LDK+ V YYG+P L +A I+ P++ L+IQP+DKS + +EKAI+ SD+G+TP++DG VIRL +PQLT ERR EL KV+ K+AEEG+VAVRNIRRD + + QK+ + ED K Sbjct: 13 MKKSVDVVRREFASLRAGRATPSILDKVTVSYYGTPTPLNQLANISVPEARVLVIQPWDKSVIPEVEKAILKSDVGITPSSDGTVIRLIIPQLTQERRTELVKVIKKKAEEGRVAVRNIRRDTNDSIKAKQKD-GIPEDEAK 153
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_ACIC1 (Ribosome-recycling factor OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=frr PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.882e-36 Identity = 71/147 (48.30%), Postives = 104/147 (70.75%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 + + +ME+ ++ R NF ++RTGR+NPA+ KI VEYYG+P L +A D+ ++I PYDK SL++IEKAI SDLG+ P +DG VIR+ +P LT ERR++ K+ +AEE +VA+RNIRR A A +KLQK+ ++ ED+V+ Sbjct: 8 EAEEKMEKATNVARENFAAIRTGRANPALFSKITVEYYGTPTPLNQLASFTVADARLIVIHPYDKGSLRAIEKAIRDSDLGVNPTDDGSVIRVAIPPLTEERRRDYIKMARHEAEEARVAIRNIRRHAKDALDKLQKDGEVGEDDVR 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_LACLA (Ribosome-recycling factor OS=Lactococcus lactis subsp. lactis GN=frr PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.458e-36 Identity = 70/145 (48.28%), Postives = 105/145 (72.41%), Query Frame = 2 Query: 356 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 RM++++ ++ + +R GR+N ++LD+++V YYG+P L +A I P++ L++ P+DKS LK IEKA+ SDLG+TP NDG VIRL +P LT ERR+EL K + K E KVA+RNIRRDA+ +K +K K+++ED++KDL Sbjct: 12 RMKQSLGSLQRDLGHIRAGRANASLLDRVQVVYYGAPTPLNQLASITIPEARVLMVTPFDKSILKDIEKALYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKYIESAKVAIRNIRRDAMDTAKKSEKAKEITEDDLKDL 156 The following BLAST results are available for this feature:
BLAST of CV712551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712551 ID=CV712551; Name=CV712551; organism=Citrus sinensis; type=EST; length=795bpback to top |